RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 PLEKHM2Q8IWE5 1019 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
MDM2-230ENST00000543323 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
MDM2-230ENST00000543323 SKIP12755 728 aa9.46□□□□□ -0.9
MDM2-230ENST00000543323 STK32AQ8WU08 396 aa9.46□□□□□ -0.9
MDM2-230ENST00000543323 MARVELD3Q96A59 401 aa9.46□□□□□ -0.9
MDM2-230ENST00000543323 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
MDM2-230ENST00000543323 RNF19BQ6ZMZ0 732 aa9.45□□□□□ -0.9
MDM2-230ENST00000543323 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
MDM2-230ENST00000543323 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
MDM2-230ENST00000543323 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
MDM2-230ENST00000543323 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
MDM2-230ENST00000543323 BLOC1S3Q6QNY0 202 aa9.44□□□□□ -0.9
MDM2-230ENST00000543323 TXNDC2Q86VQ3 553 aa9.44□□□□□ -0.9
MDM2-230ENST00000543323 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
MDM2-230ENST00000543323 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
MDM2-230ENST00000543323 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
MDM2-230ENST00000543323 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
MDM2-230ENST00000543323 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
MDM2-230ENST00000543323 BHMG1C9JSJ3 638 aaPredicted RBP9.42□□□□□ -0.9
MDM2-230ENST00000543323 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
MDM2-230ENST00000543323 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
MDM2-230ENST00000543323 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
MDM2-230ENST00000543323 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L21D6R901 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L18D6R9N7 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L22D6RA61 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L17D6RBQ6 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L19D6RCP7 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L20D6RJB6 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 USP17L24Q0WX57 530 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 PTPRNQ16849 979 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 LRCH3Q96II8 777 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
MDM2-230ENST00000543323 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
MDM2-230ENST00000543323 JUNDP17535 347 aa9.4□□□□□ -0.9
MDM2-230ENST00000543323 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
MDM2-230ENST00000543323 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
MDM2-230ENST00000543323 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
MDM2-230ENST00000543323 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
MDM2-230ENST00000543323 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
MDM2-230ENST00000543323 TK2O00142 265 aa9.39□□□□□ -0.91
MDM2-230ENST00000543323 SSFA2P28290 1259 aa9.39□□□□□ -0.91
MDM2-230ENST00000543323 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
MDM2-230ENST00000543323 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
MDM2-230ENST00000543323 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
MDM2-230ENST00000543323 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
MDM2-230ENST00000543323 CEP126Q9P2H0 1117 aa9.39□□□□□ -0.91
MDM2-230ENST00000543323 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
MDM2-230ENST00000543323 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
MDM2-230ENST00000543323 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
MDM2-230ENST00000543323 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
MDM2-230ENST00000543323 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
MDM2-230ENST00000543323 PTK7Q13308 1070 aa9.38□□□□□ -0.91
MDM2-230ENST00000543323 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
MDM2-230ENST00000543323 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
MDM2-230ENST00000543323 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
MDM2-230ENST00000543323 NCOA4Q13772 614 aa9.37□□□□□ -0.91
MDM2-230ENST00000543323 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
MDM2-230ENST00000543323 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
MDM2-230ENST00000543323 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
MDM2-230ENST00000543323 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
MDM2-230ENST00000543323 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
MDM2-230ENST00000543323 RASA1P20936 1047 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 CTHP32929 405 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 PTK2Q05397 1052 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 FAM69CQ0P6D2 419 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 SCUBE3Q8IX30 993 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 PHTF2Q8N3S3 785 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
MDM2-230ENST00000543323 SLAIN2Q9P270 581 aa9.36□□□□□ -0.91
MDM2-230ENST00000543323 NR1I2O75469 434 aa9.35□□□□□ -0.91
MDM2-230ENST00000543323 ANKMY2Q8IV38 441 aa9.35□□□□□ -0.91
MDM2-230ENST00000543323 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
MDM2-230ENST00000543323 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
MDM2-230ENST00000543323 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
MDM2-230ENST00000543323 ERCC3P19447 782 aa9.34□□□□□ -0.91
MDM2-230ENST00000543323 PCDHB9Q9Y5E1 797 aa9.34□□□□□ -0.91
MDM2-230ENST00000543323 IGSF3O75054 1194 aa9.33□□□□□ -0.92
MDM2-230ENST00000543323 CCNYL3P0C7X3 344 aa9.33□□□□□ -0.92
MDM2-230ENST00000543323 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
MDM2-230ENST00000543323 OCSTAMPQ9BR26 566 aa9.33□□□□□ -0.92
MDM2-230ENST00000543323 CHIC2Q9UKJ5 165 aa9.33□□□□□ -0.92
MDM2-230ENST00000543323 SOWAHDA6NJG2 315 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 UNCXA6NJT0 531 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 APLP1P51693 650 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms