RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 C8orf34Q49A92 452 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 VWDEQ8N2E2 1590 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
CDH4-201ENST00000543233 BCL2L13Q9BXK5 485 aa14.15□□□□□ -0.14
CDH4-201ENST00000543233 CERS3Q8IU89 383 aa14.15□□□□□ -0.14
CDH4-201ENST00000543233 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
CDH4-201ENST00000543233 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
CDH4-201ENST00000543233 SLFN5Q08AF3 891 aa14.14□□□□□ -0.15
CDH4-201ENST00000543233 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
CDH4-201ENST00000543233 MCM4P33991 863 aa14.13□□□□□ -0.15
CDH4-201ENST00000543233 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
CDH4-201ENST00000543233 KIF1BO60333 1816 aa14.13□□□□□ -0.15
CDH4-201ENST00000543233 IGSF3O75054 1194 aa14.13□□□□□ -0.15
CDH4-201ENST00000543233 KIF20AO95235 890 aa14.13□□□□□ -0.15
CDH4-201ENST00000543233 U2AF1L5P0DN76 240 aaPredicted RBP14.13□□□□□ -0.15
CDH4-201ENST00000543233 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDH4-201ENST00000543233 CCDC94Q9BW85 323 aaPredicted RBP14.13□□□□□ -0.15
CDH4-201ENST00000543233 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
CDH4-201ENST00000543233 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
CDH4-201ENST00000543233 TEX2Q8IWB9 1127 aa14.12□□□□□ -0.15
CDH4-201ENST00000543233 PRAM1Q96QH2 718 aa14.12□□□□□ -0.15
CDH4-201ENST00000543233 FRMPD1Q5SYB0 1578 aa14.12□□□□□ -0.15
CDH4-201ENST00000543233 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
CDH4-201ENST00000543233 SYNMO15061 1565 aa14.11□□□□□ -0.15
CDH4-201ENST00000543233 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
CDH4-201ENST00000543233 MYOM2P54296 1465 aa14.11□□□□□ -0.15
CDH4-201ENST00000543233 FBLN1P23142 703 aa14.11□□□□□ -0.15
CDH4-201ENST00000543233 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
CDH4-201ENST00000543233 LETM1O95202 739 aaPredicted RBP14.1□□□□□ -0.15
CDH4-201ENST00000543233 TCP11L2Q8N4U5 519 aa14.1□□□□□ -0.15
CDH4-201ENST00000543233 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
CDH4-201ENST00000543233 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
CDH4-201ENST00000543233 PIK3C2GO75747 1445 aa14.09□□□□□ -0.15
CDH4-201ENST00000543233 KDM5AP29375 1690 aaKnown RBP14.09□□□□□ -0.15
CDH4-201ENST00000543233 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.09□□□□□ -0.15
CDH4-201ENST00000543233 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
CDH4-201ENST00000543233 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
CDH4-201ENST00000543233 ABCC3O15438 1527 aa14.08□□□□□ -0.15
CDH4-201ENST00000543233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.15
CDH4-201ENST00000543233 WWC1Q8IX03 1113 aa14.08□□□□□ -0.15
CDH4-201ENST00000543233 PANK1Q8TE04 598 aa14.08□□□□□ -0.15
CDH4-201ENST00000543233 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.15
CDH4-201ENST00000543233 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.15
CDH4-201ENST00000543233 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
CDH4-201ENST00000543233 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
CDH4-201ENST00000543233 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
CDH4-201ENST00000543233 RPGRIP1LQ68CZ1 1315 aa14.07□□□□□ -0.16
CDH4-201ENST00000543233 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
CDH4-201ENST00000543233 MYOM1P52179 1685 aa14.07□□□□□ -0.16
CDH4-201ENST00000543233 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
CDH4-201ENST00000543233 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
CDH4-201ENST00000543233 TNNQ9UQP3 1299 aa14.06□□□□□ -0.16
CDH4-201ENST00000543233 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
CDH4-201ENST00000543233 TERF1P54274 439 aa14.05□□□□□ -0.16
CDH4-201ENST00000543233 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
CDH4-201ENST00000543233 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
CDH4-201ENST00000543233 CABP1Q9NZU7 370 aa14.04□□□□□ -0.16
CDH4-201ENST00000543233 CCDC173Q0VFZ6 552 aa14.04□□□□□ -0.16
CDH4-201ENST00000543233 CENPQQ7L2Z9 268 aaPredicted RBP14.04□□□□□ -0.16
CDH4-201ENST00000543233 LMTK2Q8IWU2 1503 aa14.03□□□□□ -0.16
CDH4-201ENST00000543233 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
CDH4-201ENST00000543233 NUTM2FA1L443 756 aa14.03□□□□□ -0.16
CDH4-201ENST00000543233 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
CDH4-201ENST00000543233 DIP2BQ9P265 1576 aa14.02□□□□□ -0.16
CDH4-201ENST00000543233 KCNJ4P48050 445 aa14.02□□□□□ -0.16
CDH4-201ENST00000543233 TAF3Q5VWG9 929 aa14.02□□□□□ -0.16
CDH4-201ENST00000543233 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.16
CDH4-201ENST00000543233 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.17
CDH4-201ENST00000543233 NASPP49321 788 aaPredicted RBP14.02□□□□□ -0.17
CDH4-201ENST00000543233 ZBTB9Q96C00 473 aa14.02□□□□□ -0.17
CDH4-201ENST00000543233 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
CDH4-201ENST00000543233 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
CDH4-201ENST00000543233 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
CDH4-201ENST00000543233 NEO1Q92859 1461 aa14.01□□□□□ -0.17
CDH4-201ENST00000543233 UPF2Q9HAU5 1272 aaKnown RBP14.01□□□□□ -0.17
CDH4-201ENST00000543233 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
CDH4-201ENST00000543233 A0A1W2PP64 1363 aa14.01□□□□□ -0.17
CDH4-201ENST00000543233 ADGRB1O14514 1584 aa14□□□□□ -0.17
CDH4-201ENST00000543233 RGS22Q8NE09 1264 aa14□□□□□ -0.17
CDH4-201ENST00000543233 POLR3AO14802 1390 aaPredicted RBP14□□□□□ -0.17
CDH4-201ENST00000543233 NKTRP30414 1462 aaKnown RBP14□□□□□ -0.17
CDH4-201ENST00000543233 INSRP06213 1382 aa14□□□□□ -0.17
CDH4-201ENST00000543233 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
CDH4-201ENST00000543233 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
CDH4-201ENST00000543233 TSC1Q92574 1164 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 TRMT2AQ8IZ69 625 aaKnown RBP13.99□□□□□ -0.17
CDH4-201ENST00000543233 KIAA1210Q9ULL0 1709 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 SEC24BO95487 1268 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 TERF2IPQ9NYB0 399 aa13.99□□□□□ -0.17
CDH4-201ENST00000543233 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
CDH4-201ENST00000543233 FYB1O15117 783 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 IGHDP01880 384 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 APPP05067 770 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 TXNDC2Q86VQ3 553 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 JARID2Q92833 1246 aaPredicted RBP13.98□□□□□ -0.17
CDH4-201ENST00000543233 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
CDH4-201ENST00000543233 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms