RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 TMX4Q9H1E5 349 aaPredicted RBP9.93□□□□□ -0.82
LRP6-206ENST00000543091 SMC4Q9NTJ3 1288 aa9.93□□□□□ -0.82
LRP6-206ENST00000543091 OS9Q13438 667 aaPredicted RBP9.92□□□□□ -0.82
LRP6-206ENST00000543091 ZFYVE9O95405 1425 aa9.92□□□□□ -0.82
LRP6-206ENST00000543091 GTF2E1P29083 439 aaPredicted RBP9.92□□□□□ -0.82
LRP6-206ENST00000543091 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
LRP6-206ENST00000543091 DDX54Q8TDD1 881 aaKnown RBP9.92□□□□□ -0.82
LRP6-206ENST00000543091 MSH5O43196 834 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 TESK2Q96S53 571 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 TSPYL4Q9UJ04 414 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 RNF17Q9BXT8 1623 aaKnown RBP9.91□□□□□ -0.82
LRP6-206ENST00000543091 FCHSD2O94868 740 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 METP08581 1390 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
LRP6-206ENST00000543091 ADGRB3O60242 1522 aa9.91□□□□□ -0.82
LRP6-206ENST00000543091 ZC3H13Q5T200 1668 aaKnown RBP9.9□□□□□ -0.82
LRP6-206ENST00000543091 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 UPF2Q9HAU5 1272 aaKnown RBP9.9□□□□□ -0.82
LRP6-206ENST00000543091 RCAN3Q9UKA8 241 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 CAMSAP1Q5T5Y3 1602 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 PNISRQ8TF01 805 aaKnown RBP9.9□□□□□ -0.82
LRP6-206ENST00000543091 ZNF335Q9H4Z2 1342 aaPredicted RBP9.9□□□□□ -0.82
LRP6-206ENST00000543091 PLA2R1Q13018 1463 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 ARHGEF10O15013 1369 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
LRP6-206ENST00000543091 TCP11L2Q8N4U5 519 aa9.9□□□□□ -0.82
LRP6-206ENST00000543091 AMOTQ4VCS5 1084 aa9.9□□□□□ -0.83
LRP6-206ENST00000543091 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.83
LRP6-206ENST00000543091 CEP152O94986 1710 aa9.89□□□□□ -0.83
LRP6-206ENST00000543091 CABP4P57796 275 aa9.89□□□□□ -0.83
LRP6-206ENST00000543091 IRX6P78412 446 aaPredicted RBP9.89□□□□□ -0.83
LRP6-206ENST00000543091 SETD1BQ9UPS6 1966 aaKnown RBP9.89□□□□□ -0.83
LRP6-206ENST00000543091 DDX58O95786 925 aaKnown RBP9.89□□□□□ -0.83
LRP6-206ENST00000543091 PIK3C2GO75747 1445 aa9.89□□□□□ -0.83
LRP6-206ENST00000543091 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 NEXNQ0ZGT2 675 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 FYB1O15117 783 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 EXOC5O00471 708 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 ELL2O00472 640 aaPredicted RBP9.88□□□□□ -0.83
LRP6-206ENST00000543091 EIF2S2P20042 333 aaKnown RBP9.88□□□□□ -0.83
LRP6-206ENST00000543091 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 RIMS1Q86UR5 1692 aaKnown RBP9.88□□□□□ -0.83
LRP6-206ENST00000543091 CHRNA2Q15822 529 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 SPHKAPQ2M3C7 1700 aa9.88□□□□□ -0.83
LRP6-206ENST00000543091 ANKRD24Q8TF21 1146 aa9.87□□□□□ -0.83
LRP6-206ENST00000543091 GCP02774 474 aa9.87□□□□□ -0.83
LRP6-206ENST00000543091 SYNMO15061 1565 aa9.87□□□□□ -0.83
LRP6-206ENST00000543091 SLC4A10Q6U841 1118 aa9.87□□□□□ -0.83
LRP6-206ENST00000543091 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
LRP6-206ENST00000543091 RBM42Q9BTD8 480 aaKnown RBP9.86□□□□□ -0.83
LRP6-206ENST00000543091 CLTCL1P53675 1640 aa9.86□□□□□ -0.83
LRP6-206ENST00000543091 TAF7LQ5H9L4 462 aa9.86□□□□□ -0.83
LRP6-206ENST00000543091 ITPRIPQ8IWB1 547 aa9.86□□□□□ -0.83
LRP6-206ENST00000543091 EDC4Q6P2E9 1401 aaKnown RBP9.85□□□□□ -0.83
LRP6-206ENST00000543091 PLEKHH1Q9ULM0 1364 aa9.85□□□□□ -0.83
LRP6-206ENST00000543091 PPRC1Q5VV67 1664 aaKnown RBP9.85□□□□□ -0.83
LRP6-206ENST00000543091 EIF5BO60841 1220 aaKnown RBP9.85□□□□□ -0.83
LRP6-206ENST00000543091 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
LRP6-206ENST00000543091 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
LRP6-206ENST00000543091 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
LRP6-206ENST00000543091 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
LRP6-206ENST00000543091 REREQ9P2R6 1566 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 ASXL1Q8IXJ9 1541 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 HMMRO75330 724 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 FLT4P35916 1363 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 E9PCH4 1651 aa9.84□□□□□ -0.83
LRP6-206ENST00000543091 API5Q9BZZ5 524 aaKnown RBP9.83□□□□□ -0.84
LRP6-206ENST00000543091 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
LRP6-206ENST00000543091 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
LRP6-206ENST00000543091 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 FER1L4A9Z1Z3 1794 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
LRP6-206ENST00000543091 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 IFNL2Q8IZJ0 200 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 USHBP1Q8N6Y0 703 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 CASC1Q6TDU7 716 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
LRP6-206ENST00000543091 CCDC30Q5VVM6 783 aa9.82□□□□□ -0.84
LRP6-206ENST00000543091 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
LRP6-206ENST00000543091 FKBP5Q13451 457 aaPredicted RBP9.81□□□□□ -0.84
LRP6-206ENST00000543091 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
LRP6-206ENST00000543091 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
LRP6-206ENST00000543091 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
LRP6-206ENST00000543091 IP6K1Q92551 441 aa9.81□□□□□ -0.84
LRP6-206ENST00000543091 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
LRP6-206ENST00000543091 WDR63Q8IWG1 891 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 FRMPD1Q5SYB0 1578 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 ADGRL3Q9HAR2 1447 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 BTG4Q9NY30 223 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 TMPOP42166 694 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms