RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-214ENST00000543048 GPRASP1Q5JY77 1395 aa13.89□□□□□ -0.19
TNFRSF1A-214ENST00000543048 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
TNFRSF1A-214ENST00000543048 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
TNFRSF1A-214ENST00000543048 ROCK2O75116 1388 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-214ENST00000543048 FNBP4Q8N3X1 1017 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-214ENST00000543048 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
TNFRSF1A-214ENST00000543048 USP21Q9UK80 565 aa13.87□□□□□ -0.19
TNFRSF1A-214ENST00000543048 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
TNFRSF1A-214ENST00000543048 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 TRPM3Q9HCF6 1732 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-214ENST00000543048 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-214ENST00000543048 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-214ENST00000543048 CABLES1Q8TDN4 633 aa13.85□□□□□ -0.19
TNFRSF1A-214ENST00000543048 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
TNFRSF1A-214ENST00000543048 ATP7BP35670 1465 aa13.85□□□□□ -0.19
TNFRSF1A-214ENST00000543048 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
TNFRSF1A-214ENST00000543048 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
TNFRSF1A-214ENST00000543048 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-214ENST00000543048 ACEP12821 1306 aa13.84□□□□□ -0.19
TNFRSF1A-214ENST00000543048 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
TNFRSF1A-214ENST00000543048 ALS2Q96Q42 1657 aa13.83□□□□□ -0.2
TNFRSF1A-214ENST00000543048 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
TNFRSF1A-214ENST00000543048 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-214ENST00000543048 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-214ENST00000543048 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
TNFRSF1A-214ENST00000543048 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-214ENST00000543048 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
TNFRSF1A-214ENST00000543048 ABCA3Q99758 1704 aa13.8□□□□□ -0.2
TNFRSF1A-214ENST00000543048 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
TNFRSF1A-214ENST00000543048 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
TNFRSF1A-214ENST00000543048 FAM83GA6ND36 823 aa13.79□□□□□ -0.2
TNFRSF1A-214ENST00000543048 ATRNO75882 1429 aa13.79□□□□□ -0.2
TNFRSF1A-214ENST00000543048 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
TNFRSF1A-214ENST00000543048 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
TNFRSF1A-214ENST00000543048 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
TNFRSF1A-214ENST00000543048 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-214ENST00000543048 SLIT2O94813 1529 aa13.77□□□□□ -0.21
TNFRSF1A-214ENST00000543048 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
TNFRSF1A-214ENST00000543048 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-214ENST00000543048 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-214ENST00000543048 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
TNFRSF1A-214ENST00000543048 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-214ENST00000543048 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
TNFRSF1A-214ENST00000543048 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
TNFRSF1A-214ENST00000543048 PLCH1Q4KWH8 1693 aa13.75□□□□□ -0.21
TNFRSF1A-214ENST00000543048 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
TNFRSF1A-214ENST00000543048 COL14A1Q05707 1796 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-214ENST00000543048 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
TNFRSF1A-214ENST00000543048 VPS72Q15906 364 aa13.74□□□□□ -0.21
TNFRSF1A-214ENST00000543048 NLRP13Q86W25 1043 aa13.74□□□□□ -0.21
TNFRSF1A-214ENST00000543048 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
TNFRSF1A-214ENST00000543048 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
TNFRSF1A-214ENST00000543048 RGS12O14924 1447 aa13.73□□□□□ -0.21
TNFRSF1A-214ENST00000543048 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 PRDM11Q9NQV5 511 aa13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-214ENST00000543048 USP6P35125 1406 aa13.71□□□□□ -0.22
TNFRSF1A-214ENST00000543048 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.22
TNFRSF1A-214ENST00000543048 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-214ENST00000543048 GCP02774 474 aa13.7□□□□□ -0.22
TNFRSF1A-214ENST00000543048 NLRP6P59044 892 aa13.7□□□□□ -0.22
TNFRSF1A-214ENST00000543048 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
TNFRSF1A-214ENST00000543048 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
TNFRSF1A-214ENST00000543048 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 TESK2Q96S53 571 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 SSH2Q76I76 1423 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 GLI3P10071 1580 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 NRAPQ86VF7 1730 aa13.69□□□□□ -0.22
TNFRSF1A-214ENST00000543048 USP19O94966 1318 aa13.68□□□□□ -0.22
TNFRSF1A-214ENST00000543048 CPSF1Q10570 1443 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-214ENST00000543048 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
TNFRSF1A-214ENST00000543048 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-214ENST00000543048 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
TNFRSF1A-214ENST00000543048 EVA1CP58658 441 aa13.67□□□□□ -0.22
TNFRSF1A-214ENST00000543048 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
TNFRSF1A-214ENST00000543048 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-214ENST00000543048 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
TNFRSF1A-214ENST00000543048 CPDO75976 1380 aa13.66□□□□□ -0.22
TNFRSF1A-214ENST00000543048 SPATA31A5Q5VU36 1347 aa13.65□□□□□ -0.22
TNFRSF1A-214ENST00000543048 SPATA31A7Q8IWB4 1347 aa13.65□□□□□ -0.22
TNFRSF1A-214ENST00000543048 MON2Q7Z3U7 1717 aa13.65□□□□□ -0.22
TNFRSF1A-214ENST00000543048 USP47Q96K76 1375 aa13.65□□□□□ -0.22
TNFRSF1A-214ENST00000543048 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
TNFRSF1A-214ENST00000543048 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
TNFRSF1A-214ENST00000543048 TMF1P82094 1093 aa13.64□□□□□ -0.23
TNFRSF1A-214ENST00000543048 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
TNFRSF1A-214ENST00000543048 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
TNFRSF1A-214ENST00000543048 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms