RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 HSPA1LP34931 641 aa14.77□□□□□ -0.04
NPIPB3-210ENST00000542817 PSME1Q06323 249 aa14.77□□□□□ -0.04
NPIPB3-210ENST00000542817 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
NPIPB3-210ENST00000542817 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
NPIPB3-210ENST00000542817 SPATA31A3Q5VYP0 1347 aa14.76□□□□□ -0.05
NPIPB3-210ENST00000542817 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
NPIPB3-210ENST00000542817 NSD3Q9BZ95 1437 aa14.76□□□□□ -0.05
NPIPB3-210ENST00000542817 ALS2Q96Q42 1657 aa14.75□□□□□ -0.05
NPIPB3-210ENST00000542817 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
NPIPB3-210ENST00000542817 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
NPIPB3-210ENST00000542817 BRD4O60885 1362 aaPredicted RBP14.75□□□□□ -0.05
NPIPB3-210ENST00000542817 PIK3C2AO00443 1686 aa14.74□□□□□ -0.05
NPIPB3-210ENST00000542817 PHLPP1O60346 1717 aa14.74□□□□□ -0.05
NPIPB3-210ENST00000542817 FYB1O15117 783 aa14.73□□□□□ -0.05
NPIPB3-210ENST00000542817 NME9Q86XW9 330 aa14.73□□□□□ -0.05
NPIPB3-210ENST00000542817 TNS3Q68CZ2 1445 aa14.73□□□□□ -0.05
NPIPB3-210ENST00000542817 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
NPIPB3-210ENST00000542817 USP31Q70CQ4 1352 aa14.72□□□□□ -0.05
NPIPB3-210ENST00000542817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
NPIPB3-210ENST00000542817 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.05
NPIPB3-210ENST00000542817 OVOS2A0A0J9YW53 1432 aa14.71□□□□□ -0.06
NPIPB3-210ENST00000542817 OVOS2Q6IE36 1432 aa14.71□□□□□ -0.06
NPIPB3-210ENST00000542817 PNPLA6Q8IY17 1366 aa14.7□□□□□ -0.06
NPIPB3-210ENST00000542817 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
NPIPB3-210ENST00000542817 USP54Q70EL1 1684 aa14.7□□□□□ -0.06
NPIPB3-210ENST00000542817 MED1Q15648 1581 aaPredicted RBP14.7□□□□□ -0.06
NPIPB3-210ENST00000542817 USP19O94966 1318 aa14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 CRYBG1Q9Y4K1 1723 aa14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 NPC1L1Q9UHC9 1359 aa14.69□□□□□ -0.06
NPIPB3-210ENST00000542817 COL22A1Q8NFW1 1626 aaPredicted RBP14.68□□□□□ -0.06
NPIPB3-210ENST00000542817 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
NPIPB3-210ENST00000542817 GGNBP2Q9H3C7 697 aa14.67□□□□□ -0.06
NPIPB3-210ENST00000542817 ARHGEF10O15013 1369 aa14.67□□□□□ -0.06
NPIPB3-210ENST00000542817 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
NPIPB3-210ENST00000542817 SLIT3O75094 1523 aa14.67□□□□□ -0.06
NPIPB3-210ENST00000542817 CABLES1Q8TDN4 633 aa14.66□□□□□ -0.06
NPIPB3-210ENST00000542817 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
NPIPB3-210ENST00000542817 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
NPIPB3-210ENST00000542817 FBLN1P23142 703 aa14.66□□□□□ -0.06
NPIPB3-210ENST00000542817 JCADQ9P266 1359 aa14.65□□□□□ -0.06
NPIPB3-210ENST00000542817 KIF20BQ96Q89 1820 aa14.65□□□□□ -0.06
NPIPB3-210ENST00000542817 NLRP6P59044 892 aa14.65□□□□□ -0.06
NPIPB3-210ENST00000542817 NFAT5O94916 1531 aa14.64□□□□□ -0.07
NPIPB3-210ENST00000542817 ABCA3Q99758 1704 aa14.64□□□□□ -0.07
NPIPB3-210ENST00000542817 LMOD2Q6P5Q4 547 aa14.64□□□□□ -0.07
NPIPB3-210ENST00000542817 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
NPIPB3-210ENST00000542817 NSD2O96028 1365 aa14.63□□□□□ -0.07
NPIPB3-210ENST00000542817 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
NPIPB3-210ENST00000542817 NLRP13Q86W25 1043 aa14.63□□□□□ -0.07
NPIPB3-210ENST00000542817 LRP6O75581 1613 aa14.62□□□□□ -0.07
NPIPB3-210ENST00000542817 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
NPIPB3-210ENST00000542817 GCP02774 474 aa14.62□□□□□ -0.07
NPIPB3-210ENST00000542817 ANKRD26Q9UPS8 1709 aa14.62□□□□□ -0.07
NPIPB3-210ENST00000542817 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
NPIPB3-210ENST00000542817 COG3Q96JB2 828 aa14.61□□□□□ -0.07
NPIPB3-210ENST00000542817 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
NPIPB3-210ENST00000542817 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
NPIPB3-210ENST00000542817 ARHGEF25Q86VW2 580 aa14.59□□□□□ -0.07
NPIPB3-210ENST00000542817 SPATA31A6Q5VVP1 1343 aa14.58□□□□□ -0.07
NPIPB3-210ENST00000542817 CPDO75976 1380 aa14.58□□□□□ -0.08
NPIPB3-210ENST00000542817 PRKRIP1Q9H875 184 aaPredicted RBP14.58□□□□□ -0.08
NPIPB3-210ENST00000542817 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
NPIPB3-210ENST00000542817 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
NPIPB3-210ENST00000542817 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
NPIPB3-210ENST00000542817 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
NPIPB3-210ENST00000542817 MAP3K19Q56UN5 1328 aa14.57□□□□□ -0.08
NPIPB3-210ENST00000542817 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 SOX12O15370 315 aa14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 TNNT2P45379 298 aaPredicted RBP14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 ZC3H6P61129 1189 aaKnown RBP14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 SMG6Q86US8 1419 aaKnown RBP14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 KCNH5Q8NCM2 988 aa14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 PEAK1Q9H792 1746 aa14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 COL18A1P39060 1754 aa14.56□□□□□ -0.08
NPIPB3-210ENST00000542817 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
NPIPB3-210ENST00000542817 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
NPIPB3-210ENST00000542817 NUTM2BA6NNL0 878 aaPredicted RBP14.54□□□□□ -0.08
NPIPB3-210ENST00000542817 NUTM2EB1AL46 878 aaPredicted RBP14.54□□□□□ -0.08
NPIPB3-210ENST00000542817 PPP2R1AP30153 589 aa14.54□□□□□ -0.08
NPIPB3-210ENST00000542817 NUTM2AQ8IVF1 878 aaPredicted RBP14.54□□□□□ -0.08
NPIPB3-210ENST00000542817 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
NPIPB3-210ENST00000542817 ADAMTS2O95450 1211 aa14.53□□□□□ -0.08
NPIPB3-210ENST00000542817 RALBP1Q15311 655 aa14.53□□□□□ -0.08
NPIPB3-210ENST00000542817 CHRNA2Q15822 529 aa14.53□□□□□ -0.08
NPIPB3-210ENST00000542817 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.08
NPIPB3-210ENST00000542817 CAMTA1Q9Y6Y1 1673 aa14.52□□□□□ -0.09
NPIPB3-210ENST00000542817 MAP2P11137 1827 aaKnown RBP14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 MTHFSP49914 203 aa14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 INSRP06213 1382 aa14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 LTN1O94822 1766 aa14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 COL3A1P02461 1466 aaPredicted RBP14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 SLIT2O94813 1529 aa14.51□□□□□ -0.09
NPIPB3-210ENST00000542817 HOXC9P31274 260 aa14.5□□□□□ -0.09
NPIPB3-210ENST00000542817 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
NPIPB3-210ENST00000542817 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
NPIPB3-210ENST00000542817 IP6K1Q92551 441 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms