RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 TMEM2Q9UHN6 1383 aa21.69■■□□□ 1.06
NELFA-216ENST00000542778 IGHDP01880 384 aa21.68■■□□□ 1.06
NELFA-216ENST00000542778 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
NELFA-216ENST00000542778 NPC1L1Q9UHC9 1359 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 MAPK8IP3Q9UPT6 1336 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 MCM4P33991 863 aa21.65■■□□□ 1.06
NELFA-216ENST00000542778 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
NELFA-216ENST00000542778 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.64■■□□□ 1.05
NELFA-216ENST00000542778 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.05
NELFA-216ENST00000542778 SLC26A8Q96RN1 970 aa21.64■■□□□ 1.05
NELFA-216ENST00000542778 TBC1D2Q9BYX2 928 aa21.64■■□□□ 1.05
NELFA-216ENST00000542778 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
NELFA-216ENST00000542778 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 MRE11P49959 708 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 ANKRD36BQ8N2N9 1353 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 ADAMTS13Q76LX8 1427 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ESPNB1AK53 854 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
NELFA-216ENST00000542778 TBC1D32Q96NH3 1257 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ERBB4Q15303 1308 aa21.59■■□□□ 1.05
NELFA-216ENST00000542778 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.05
NELFA-216ENST00000542778 BCAR3O75815 825 aa21.58■■□□□ 1.05
NELFA-216ENST00000542778 GGNBP2Q9H3C7 697 aa21.58■■□□□ 1.05
NELFA-216ENST00000542778 NKTRP30414 1462 aaKnown RBP21.57■■□□□ 1.04
NELFA-216ENST00000542778 TRAK2O60296 914 aa21.57■■□□□ 1.04
NELFA-216ENST00000542778 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
NELFA-216ENST00000542778 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
NELFA-216ENST00000542778 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
NELFA-216ENST00000542778 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 RIMS1Q86UR5 1692 aaKnown RBP21.56■■□□□ 1.04
NELFA-216ENST00000542778 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 GRPEL1Q9HAV7 217 aa21.55■■□□□ 1.04
NELFA-216ENST00000542778 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
NELFA-216ENST00000542778 TPM2P07951 284 aa21.54■■□□□ 1.04
NELFA-216ENST00000542778 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
NELFA-216ENST00000542778 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 FBLN1P23142 703 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 MTHFSP49914 203 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 USP32Q8NFA0 1604 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 SPRYD3Q8NCJ5 442 aa21.52■■□□□ 1.04
NELFA-216ENST00000542778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■□□ 15.3
NELFA-216ENST00000542778 PDCL3Q9H2J4 239 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
NELFA-216ENST00000542778 FYB1O15117 783 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 CHMP5Q9NZZ3 219 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
NELFA-216ENST00000542778 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
NELFA-216ENST00000542778 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
NELFA-216ENST00000542778 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.48■■□□□ 1.03
NELFA-216ENST00000542778 ARHGAP23Q9P227 1491 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 APAF1O14727 1248 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 SLIT1O75093 1534 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 CPS1P31327 1500 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 TECPR2O15040 1411 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 MED14O60244 1454 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 NUDT16Q96DE0 195 aaKnown RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 TRIM44Q96DX7 344 aaPredicted RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 DDX11L8A8MPP1 907 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 THEMISQ8N1K5 641 aaPredicted RBP21.45■■□□□ 1.02
NELFA-216ENST00000542778 PANK1Q8TE04 598 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 E9PSI1 815 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
NELFA-216ENST00000542778 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 AMOTL2Q9Y2J4 779 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 FAM135BQ49AJ0 1406 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
NELFA-216ENST00000542778 CEP170BQ9Y4F5 1589 aaPredicted RBP21.42■■□□□ 1.02
NELFA-216ENST00000542778 CALD1Q05682 793 aaKnown RBP21.42■■□□□ 1.02
NELFA-216ENST00000542778 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
NELFA-216ENST00000542778 RRP7AQ9Y3A4 280 aaKnown RBP21.41■■□□□ 1.02
NELFA-216ENST00000542778 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
NELFA-216ENST00000542778 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
NELFA-216ENST00000542778 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 NSD2O96028 1365 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 NEUROD2Q15784 382 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 NME9Q86XW9 330 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.02
NELFA-216ENST00000542778 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms