RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 BMP1P13497 986 aa8.74□□□□□ -1.01
LEMD3-204ENST00000542032 RSBN1LQ6PCB5 846 aaPredicted RBP8.74□□□□□ -1.01
LEMD3-204ENST00000542032 RETREG3Q86VR2 466 aa8.74□□□□□ -1.01
LEMD3-204ENST00000542032 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
LEMD3-204ENST00000542032 RNF225M0QZC1 329 aaPredicted RBP8.72□□□□□ -1.01
LEMD3-204ENST00000542032 ZBTB24O43167 697 aaPredicted RBP8.72□□□□□ -1.01
LEMD3-204ENST00000542032 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
LEMD3-204ENST00000542032 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.02
LEMD3-204ENST00000542032 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
LEMD3-204ENST00000542032 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
LEMD3-204ENST00000542032 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
LEMD3-204ENST00000542032 IGHA1P01876 353 aa8.7□□□□□ -1.02
LEMD3-204ENST00000542032 JUNDP17535 347 aa8.7□□□□□ -1.02
LEMD3-204ENST00000542032 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
LEMD3-204ENST00000542032 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
LEMD3-204ENST00000542032 C6orf229H3BNL8 230 aa8.69□□□□□ -1.02
LEMD3-204ENST00000542032 MTMR2Q13614 643 aa8.69□□□□□ -1.02
LEMD3-204ENST00000542032 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
LEMD3-204ENST00000542032 PRPF38BQ5VTL8 546 aaKnown RBP8.68□□□□□ -1.02
LEMD3-204ENST00000542032 LIMD1Q9UGP4 676 aa8.68□□□□□ -1.02
LEMD3-204ENST00000542032 DESI1Q6ICB0 168 aa8.67□□□□□ -1.02
LEMD3-204ENST00000542032 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
LEMD3-204ENST00000542032 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
LEMD3-204ENST00000542032 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 HRCP23327 699 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
LEMD3-204ENST00000542032 LILRB3O75022 631 aa8.65□□□□□ -1.02
LEMD3-204ENST00000542032 PRR7Q8TB68 274 aa8.65□□□□□ -1.02
LEMD3-204ENST00000542032 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
LEMD3-204ENST00000542032 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
LEMD3-204ENST00000542032 CLK2P49760 499 aaKnown RBP8.64□□□□□ -1.03
LEMD3-204ENST00000542032 CFAP99D6REC4 459 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 ADAM23O75077 832 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 TRIM32Q13049 653 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 QPCTQ16769 361 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 PTPRNQ16849 979 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
LEMD3-204ENST00000542032 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
LEMD3-204ENST00000542032 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
LEMD3-204ENST00000542032 IRS1P35568 1242 aa8.61□□□□□ -1.03
LEMD3-204ENST00000542032 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
LEMD3-204ENST00000542032 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
LEMD3-204ENST00000542032 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
LEMD3-204ENST00000542032 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
LEMD3-204ENST00000542032 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-204ENST00000542032 LYPD8Q6UX82 237 aa8.6□□□□□ -1.03
LEMD3-204ENST00000542032 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
LEMD3-204ENST00000542032 CAPN5O15484 640 aaPredicted RBP8.59□□□□□ -1.03
LEMD3-204ENST00000542032 CCDC24Q8N4L8 307 aa8.59□□□□□ -1.03
LEMD3-204ENST00000542032 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
LEMD3-204ENST00000542032 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
LEMD3-204ENST00000542032 FOXK2Q01167 660 aa8.58□□□□□ -1.04
LEMD3-204ENST00000542032 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
LEMD3-204ENST00000542032 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
LEMD3-204ENST00000542032 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-204ENST00000542032 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
LEMD3-204ENST00000542032 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
LEMD3-204ENST00000542032 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
LEMD3-204ENST00000542032 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
LEMD3-204ENST00000542032 GOPCQ9HD26 462 aa8.57□□□□□ -1.04
LEMD3-204ENST00000542032 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
LEMD3-204ENST00000542032 WNT7BP56706 349 aa8.56□□□□□ -1.04
LEMD3-204ENST00000542032 SKOR1P84550 965 aa8.56□□□□□ -1.04
LEMD3-204ENST00000542032 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
LEMD3-204ENST00000542032 PROCA1Q8NCQ7 364 aaPredicted RBP8.55□□□□□ -1.04
LEMD3-204ENST00000542032 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-204ENST00000542032 Q8N3U1 123 aa8.54□□□□□ -1.04
LEMD3-204ENST00000542032 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
LEMD3-204ENST00000542032 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
LEMD3-204ENST00000542032 MAP10Q9P2G4 905 aa8.51□□□□□ -1.05
LEMD3-204ENST00000542032 SH3BP2P78314 561 aa8.5□□□□□ -1.05
LEMD3-204ENST00000542032 KRT76Q01546 638 aa8.5□□□□□ -1.05
LEMD3-204ENST00000542032 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
LEMD3-204ENST00000542032 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-204ENST00000542032 SIAH2O43255 324 aa8.49□□□□□ -1.05
LEMD3-204ENST00000542032 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
LEMD3-204ENST00000542032 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
LEMD3-204ENST00000542032 MSTNO14793 375 aa8.48□□□□□ -1.05
LEMD3-204ENST00000542032 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
LEMD3-204ENST00000542032 KANK3Q6NY19 840 aa8.48□□□□□ -1.05
LEMD3-204ENST00000542032 BAP1Q92560 729 aa8.48□□□□□ -1.05
LEMD3-204ENST00000542032 CTHP32929 405 aa8.47□□□□□ -1.05
LEMD3-204ENST00000542032 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-204ENST00000542032 SVOPQ8N4V2 548 aa8.47□□□□□ -1.05
LEMD3-204ENST00000542032 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
LEMD3-204ENST00000542032 TSC1Q92574 1164 aa8.46□□□□□ -1.06
LEMD3-204ENST00000542032 WASF2Q9Y6W5 498 aa8.46□□□□□ -1.06
LEMD3-204ENST00000542032 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
LEMD3-204ENST00000542032 RFC5P40937 340 aa8.45□□□□□ -1.06
LEMD3-204ENST00000542032 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
LEMD3-204ENST00000542032 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms