RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 TNNQ9UQP3 1299 aa9.04□□□□□ -0.96
PPME1-206ENST00000541340 ST20-MTHFSA0A0A6YYL1 179 aa9.04□□□□□ -0.96
PPME1-206ENST00000541340 SRPK2P78362 688 aaKnown RBP9.04□□□□□ -0.96
PPME1-206ENST00000541340 NLRP13Q86W25 1043 aa9.04□□□□□ -0.96
PPME1-206ENST00000541340 POLR1AO95602 1720 aaPredicted RBP9.03□□□□□ -0.96
PPME1-206ENST00000541340 ADAMTSL3P82987 1691 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 KIF1CO43896 1103 aaKnown RBP9.03□□□□□ -0.96
PPME1-206ENST00000541340 ZNF853P0CG23 659 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 ANAPC15P60006 121 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 GBP4Q96PP9 640 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.03□□□□□ -0.96
PPME1-206ENST00000541340 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
PPME1-206ENST00000541340 ZNF445P59923 1031 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 LRRIQ1Q96JM4 1722 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 TSGA10IPQ3SY00 556 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 CXorf56Q9H5V9 222 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
PPME1-206ENST00000541340 CFAP65Q6ZU64 1925 aaKnown RBP9.02□□□□□ -0.96
PPME1-206ENST00000541340 RAD50Q92878 1312 aa9.02□□□□□ -0.96
PPME1-206ENST00000541340 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
PPME1-206ENST00000541340 CASQ1P31415 396 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 FAM212AQ96EL1 285 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 ADAMTS12P58397 1594 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 RTEL1-TNFRSF6BF6WH68 1400 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 CYP2C19P33261 490 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 NOLC1Q14978 699 aaKnown RBP eCLIP9.02□□□□□ -0.977e-9■■■□□ 15.8
PPME1-206ENST00000541340 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
PPME1-206ENST00000541340 DMRT2Q9Y5R5 561 aa9.02□□□□□ -0.97
PPME1-206ENST00000541340 OTUD6BQ8N6M0 293 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
PPME1-206ENST00000541340 ANKRD30BQ9BXX2 1392 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 FKBP5Q13451 457 aaPredicted RBP9.01□□□□□ -0.97
PPME1-206ENST00000541340 KRT222Q8N1A0 295 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 DRC1Q96MC2 740 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 C22orf23Q9BZE7 217 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 NCOA3Q9Y6Q9 1424 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
PPME1-206ENST00000541340 TRIM66O15016 1216 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 SSFA2P28290 1259 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 NCBP1Q09161 790 aaKnown RBP9.01□□□□□ -0.97
PPME1-206ENST00000541340 SART3Q15020 963 aaKnown RBP9.01□□□□□ -0.97
PPME1-206ENST00000541340 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 ZNF526Q8TF50 670 aaPredicted RBP9.01□□□□□ -0.97
PPME1-206ENST00000541340 ZNF446Q9NWS9 450 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 POLKQ9UBT6 870 aa9.01□□□□□ -0.97
PPME1-206ENST00000541340 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
PPME1-206ENST00000541340 TERF2IPQ9NYB0 399 aa9□□□□□ -0.97
PPME1-206ENST00000541340 JRKLQ9Y4A0 524 aa9□□□□□ -0.97
PPME1-206ENST00000541340 RPRD2Q5VT52 1461 aaKnown RBP9□□□□□ -0.97
PPME1-206ENST00000541340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.973e-6■□□□□ 10.4
PPME1-206ENST00000541340 NBPF6Q5VWK0 638 aa9□□□□□ -0.97
PPME1-206ENST00000541340 NBPF5PQ86XG9 351 aaPredicted RBP9□□□□□ -0.97
PPME1-206ENST00000541340 CREBRFQ8IUR6 639 aa9□□□□□ -0.97
PPME1-206ENST00000541340 CCDC146Q8IYE0 955 aa9□□□□□ -0.97
PPME1-206ENST00000541340 C10orf67Q8IYJ2 551 aa9□□□□□ -0.97
PPME1-206ENST00000541340 KIF18AQ8NI77 898 aa9□□□□□ -0.97
PPME1-206ENST00000541340 NBPF4Q96M43 638 aa9□□□□□ -0.97
PPME1-206ENST00000541340 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
PPME1-206ENST00000541340 KIF27Q86VH2 1401 aa9□□□□□ -0.97
PPME1-206ENST00000541340 MIA2Q96PC5 1412 aa9□□□□□ -0.97
PPME1-206ENST00000541340 PRIM1P49642 420 aaKnown RBP9□□□□□ -0.97
PPME1-206ENST00000541340 RAB3GAP1Q15042 981 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 CAVIN1Q6NZI2 390 aaKnown RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 PDZRN3Q9UPQ7 1066 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 CTTNBP2Q8WZ74 1663 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 MYO1CO00159 1063 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 SSR1P43307 286 aaKnown RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 ZNF513Q8N8E2 541 aaPredicted RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 DDX49Q9Y6V7 483 aaKnown RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 MTUS2Q5JR59 1369 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 ARID4AP29374 1257 aaPredicted RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 ZKSCAN8Q15776 578 aaPredicted RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 MNS1Q8NEH6 495 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 SLC4A1APQ9BWU0 796 aaKnown RBP8.99□□□□□ -0.97
PPME1-206ENST00000541340 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 HECW2Q9P2P5 1572 aa8.99□□□□□ -0.97
PPME1-206ENST00000541340 BIRC2Q13490 618 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 ZSCAN23Q3MJ62 389 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 LRCH2Q5VUJ6 765 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 CARD11Q9BXL7 1154 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 NUP160Q12769 1436 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
PPME1-206ENST00000541340 GSCP56915 257 aaPredicted RBP8.98□□□□□ -0.97
PPME1-206ENST00000541340 SYT10Q6XYQ8 523 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 RBM42Q9BTD8 480 aaKnown RBP8.98□□□□□ -0.97
PPME1-206ENST00000541340 SPTLC3Q9NUV7 552 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 RBM28Q9NW13 759 aaKnown RBP8.98□□□□□ -0.97
PPME1-206ENST00000541340 IGF1RP08069 1367 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 NPC1L1Q9UHC9 1359 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 AK9Q5TCS8 1911 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 ST7Q9NRC1 585 aa8.98□□□□□ -0.97
PPME1-206ENST00000541340 ADCY10Q96PN6 1610 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms