RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 ROCK2O75116 1388 aaKnown RBP28.79■■■□□ 2.2
ATN1-204ENST00000541029 TRIM26Q12899 539 aaPredicted RBP28.79■■■□□ 2.2
ATN1-204ENST00000541029 UNC5CLQ8IV45 518 aa28.79■■■□□ 2.2
ATN1-204ENST00000541029 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
ATN1-204ENST00000541029 PAK3O75914 559 aaPredicted RBP28.77■■■□□ 2.2
ATN1-204ENST00000541029 BRWD3Q6RI45 1802 aa28.76■■■□□ 2.19
ATN1-204ENST00000541029 PPIP5K1Q6PFW1 1433 aa28.76■■■□□ 2.19
ATN1-204ENST00000541029 ACEP12821 1306 aa28.75■■■□□ 2.19
ATN1-204ENST00000541029 SRPK2P78362 688 aaKnown RBP28.75■■■□□ 2.19
ATN1-204ENST00000541029 GJD4Q96KN9 370 aaPredicted RBP28.75■■■□□ 2.19
ATN1-204ENST00000541029 CCDC61Q9Y6R9 512 aa28.75■■■□□ 2.19
ATN1-204ENST00000541029 EP400Q96L91 3159 aa28.75■■■□□ 2.19
ATN1-204ENST00000541029 NBPF8Q3BBV2 869 aa28.73■■■□□ 2.19
ATN1-204ENST00000541029 CABP2Q9NPB3 220 aa28.73■■■□□ 2.19
ATN1-204ENST00000541029 PLEKHG3A1L390 1219 aa28.71■■■□□ 2.19
ATN1-204ENST00000541029 ATAD2Q6PL18 1390 aa28.71■■■□□ 2.19
ATN1-204ENST00000541029 NRKQ7Z2Y5 1582 aa28.71■■■□□ 2.19
ATN1-204ENST00000541029 FAM83GA6ND36 823 aa28.7■■■□□ 2.18
ATN1-204ENST00000541029 TONSLQ96HA7 1378 aa28.7■■■□□ 2.18
ATN1-204ENST00000541029 AKAP12Q02952 1782 aa28.67■■■□□ 2.18
ATN1-204ENST00000541029 VPS72Q15906 364 aa28.66■■■□□ 2.18
ATN1-204ENST00000541029 NUTM2GQ5VZR2 741 aa28.65■■■□□ 2.18
ATN1-204ENST00000541029 EVC2Q86UK5 1308 aa28.64■■■□□ 2.17
ATN1-204ENST00000541029 BTG4Q9NY30 223 aa28.63■■■□□ 2.17
ATN1-204ENST00000541029 CCDC9Q9Y3X0 531 aaKnown RBP28.62■■■□□ 2.17
ATN1-204ENST00000541029 KIAA0232Q92628 1395 aa28.62■■■□□ 2.17
ATN1-204ENST00000541029 PIK3C2AO00443 1686 aa28.61■■■□□ 2.17
ATN1-204ENST00000541029 USP6P35125 1406 aa28.6■■■□□ 2.17
ATN1-204ENST00000541029 PRDM11Q9NQV5 511 aa28.6■■■□□ 2.17
ATN1-204ENST00000541029 CABP1Q9NZU7 370 aa28.59■■■□□ 2.17
ATN1-204ENST00000541029 ABTB2Q8N961 1025 aa28.58■■■□□ 2.17
ATN1-204ENST00000541029 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
ATN1-204ENST00000541029 LMO7Q8WWI1 1683 aa28.57■■■□□ 2.16
ATN1-204ENST00000541029 USP19O94966 1318 aa28.56■■■□□ 2.16
ATN1-204ENST00000541029 MON2Q7Z3U7 1717 aa28.56■■■□□ 2.16
ATN1-204ENST00000541029 SBNO2Q9Y2G9 1366 aa28.56■■■□□ 2.16
ATN1-204ENST00000541029 BRD4O60885 1362 aaPredicted RBP28.55■■■□□ 2.16
ATN1-204ENST00000541029 THSD7AQ9UPZ6 1657 aa28.54■■■□□ 2.16
ATN1-204ENST00000541029 CHRNA2Q15822 529 aa28.54■■■□□ 2.16
ATN1-204ENST00000541029 SEPT12Q8IYM1 358 aa28.54■■■□□ 2.16
ATN1-204ENST00000541029 ZC3H6P61129 1189 aaKnown RBP28.53■■■□□ 2.16
ATN1-204ENST00000541029 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
ATN1-204ENST00000541029 SLIT3O75094 1523 aa28.52■■■□□ 2.16
ATN1-204ENST00000541029 SPATA31A5Q5VU36 1347 aa28.49■■■□□ 2.15
ATN1-204ENST00000541029 SPATA31A7Q8IWB4 1347 aa28.49■■■□□ 2.15
ATN1-204ENST00000541029 ONECUT3O60422 494 aaPredicted RBP28.49■■■□□ 2.15
ATN1-204ENST00000541029 FAM98CQ17RN3 349 aaKnown RBP28.49■■■□□ 2.15
ATN1-204ENST00000541029 CPDO75976 1380 aa28.49■■■□□ 2.15
ATN1-204ENST00000541029 CAMTA1Q9Y6Y1 1673 aa28.48■■■□□ 2.15
ATN1-204ENST00000541029 A0A0G2JS52 829 aa28.48■■■□□ 2.15
ATN1-204ENST00000541029 MYT1Q01538 1121 aa28.48■■■□□ 2.15
ATN1-204ENST00000541029 NLRP13Q86W25 1043 aa28.48■■■□□ 2.15
ATN1-204ENST00000541029 CPSF1Q10570 1443 aaKnown RBP28.45■■■□□ 2.15
ATN1-204ENST00000541029 STRN4Q9NRL3 753 aa28.45■■■□□ 2.14
ATN1-204ENST00000541029 GCP02774 474 aa28.43■■■□□ 2.14
ATN1-204ENST00000541029 KRT27Q7Z3Y8 459 aa28.43■■■□□ 2.14
ATN1-204ENST00000541029 BLMP54132 1417 aaPredicted RBP28.43■■■□□ 2.14
ATN1-204ENST00000541029 COL18A1P39060 1754 aa28.42■■■□□ 2.14
ATN1-204ENST00000541029 NLRP6P59044 892 aa28.42■■■□□ 2.14
ATN1-204ENST00000541029 SPATA31A1Q5TZJ5 1347 aa28.42■■■□□ 2.14
ATN1-204ENST00000541029 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
ATN1-204ENST00000541029 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
ATN1-204ENST00000541029 USP54Q70EL1 1684 aa28.41■■■□□ 2.14
ATN1-204ENST00000541029 TTC21BQ7Z4L5 1316 aa28.41■■■□□ 2.14
ATN1-204ENST00000541029 KTN1Q86UP2 1357 aaKnown RBP28.4■■■□□ 2.14
ATN1-204ENST00000541029 COL5A2P05997 1499 aaPredicted RBP28.4■■■□□ 2.14
ATN1-204ENST00000541029 CCDC125Q86Z20 511 aa28.39■■■□□ 2.14
ATN1-204ENST00000541029 RGPD1P0DJD0 1748 aa28.38■■■□□ 2.13
ATN1-204ENST00000541029 ZNF692Q9BU19 519 aaPredicted RBP28.38■■■□□ 2.13
ATN1-204ENST00000541029 WNK3Q9BYP7 1800 aa28.36■■■□□ 2.13
ATN1-204ENST00000541029 ZBTB7CA1YPR0 619 aa28.36■■■□□ 2.13
ATN1-204ENST00000541029 TTC21AQ8NDW8 1320 aa28.36■■■□□ 2.13
ATN1-204ENST00000541029 TNS1Q9HBL0 1735 aaKnown RBP28.35■■■□□ 2.13
ATN1-204ENST00000541029 NFAT5O94916 1531 aa28.35■■■□□ 2.13
ATN1-204ENST00000541029 EVA1CP58658 441 aa28.35■■■□□ 2.13
ATN1-204ENST00000541029 LARP1Q6PKG0 1096 aaKnown RBP28.35■■■□□ 2.13
ATN1-204ENST00000541029 USP35Q9P2H5 1018 aa28.35■■■□□ 2.13
ATN1-204ENST00000541029 PARP4Q9UKK3 1724 aaKnown RBP28.33■■■□□ 2.13
ATN1-204ENST00000541029 LTN1O94822 1766 aa28.32■■■□□ 2.12
ATN1-204ENST00000541029 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
ATN1-204ENST00000541029 TMC1Q8TDI8 760 aa28.32■■■□□ 2.12
ATN1-204ENST00000541029 TESK2Q96S53 571 aa28.32■■■□□ 2.12
ATN1-204ENST00000541029 AATKQ6ZMQ8 1374 aa28.32■■■□□ 2.12
ATN1-204ENST00000541029 FAM182BQ5T319 152 aa28.31■■■□□ 2.12
ATN1-204ENST00000541029 PCGF6Q9BYE7 350 aa28.3■■■□□ 2.12
ATN1-204ENST00000541029 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
ATN1-204ENST00000541029 USP47Q96K76 1375 aa28.29■■■□□ 2.12
ATN1-204ENST00000541029 SOX12O15370 315 aa28.29■■■□□ 2.12
ATN1-204ENST00000541029 CRB1P82279 1406 aa28.28■■■□□ 2.12
ATN1-204ENST00000541029 DEFB132Q7Z7B7 95 aa28.28■■■□□ 2.12
ATN1-204ENST00000541029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.28■■■□□ 2.12
ATN1-204ENST00000541029 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
ATN1-204ENST00000541029 SF3B2Q13435 895 aaKnown RBP28.27■■■□□ 2.12
ATN1-204ENST00000541029 LRRC37A3O60309 1634 aa28.27■■■□□ 2.12
ATN1-204ENST00000541029 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.12
ATN1-204ENST00000541029 BARGINQ6ZT62 677 aa28.26■■■□□ 2.11
ATN1-204ENST00000541029 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.11
ATN1-204ENST00000541029 ZRANB1Q9UGI0 708 aa28.26■■■□□ 2.11
ATN1-204ENST00000541029 ABCC6O95255 1503 aa28.25■■■□□ 2.11
ATN1-204ENST00000541029 TCP11L2Q8N4U5 519 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms