RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 EIF3AQ14152 1382 aaKnown RBP6.66□□□□□ -1.34
PROM1-220ENST00000540805 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
PROM1-220ENST00000540805 DUSP27Q5VZP5 1158 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 PANK3Q9H999 370 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 NPC1L1Q9UHC9 1359 aa6.65□□□□□ -1.34
PROM1-220ENST00000540805 KLHL34Q8N239 644 aa6.65□□□□□ -1.34
PROM1-220ENST00000540805 RRP9O43818 475 aaKnown RBP6.65□□□□□ -1.34
PROM1-220ENST00000540805 XRCC6P12956 609 aaKnown RBP eCLIP6.65□□□□□ -1.34
PROM1-220ENST00000540805 RPGRIP1LQ68CZ1 1315 aa6.65□□□□□ -1.35
PROM1-220ENST00000540805 KNDC1Q76NI1 1749 aa6.65□□□□□ -1.35
PROM1-220ENST00000540805 GOLGA2Q08379 1002 aa6.65□□□□□ -1.35
PROM1-220ENST00000540805 FBXO31Q5XUX0 539 aaPredicted RBP6.65□□□□□ -1.35
PROM1-220ENST00000540805 PLEKHH1Q9ULM0 1364 aa6.64□□□□□ -1.35
PROM1-220ENST00000540805 ADAMTS8Q9UP79 889 aa6.64□□□□□ -1.35
PROM1-220ENST00000540805 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
PROM1-220ENST00000540805 NLRP1Q9C000 1473 aa6.64□□□□□ -1.35
PROM1-220ENST00000540805 CHMP4BQ9H444 224 aaKnown RBP6.64□□□□□ -1.35
PROM1-220ENST00000540805 TULP1O00294 542 aaPredicted RBP6.64□□□□□ -1.35
PROM1-220ENST00000540805 MAPK8IP2Q13387 824 aaPredicted RBP6.64□□□□□ -1.35
PROM1-220ENST00000540805 CCDC9Q9Y3X0 531 aaKnown RBP6.64□□□□□ -1.35
PROM1-220ENST00000540805 C3P01024 1663 aa6.63□□□□□ -1.35
PROM1-220ENST00000540805 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
PROM1-220ENST00000540805 TMF1P82094 1093 aa6.63□□□□□ -1.35
PROM1-220ENST00000540805 USP19O94966 1318 aa6.63□□□□□ -1.35
PROM1-220ENST00000540805 ZNF521Q96K83 1311 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 MAPK8IP3Q9UPT6 1336 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 DLC1Q96QB1 1528 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 SLFN5Q08AF3 891 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 TPRNQ4KMQ1 711 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 CFAP53Q96M91 514 aa6.62□□□□□ -1.35
PROM1-220ENST00000540805 MED1Q15648 1581 aaPredicted RBP6.62□□□□□ -1.35
PROM1-220ENST00000540805 TMEM132EQ6IEE7 984 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 GOLGA6L3A6NEY3 463 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 PLCD3Q8N3E9 789 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 UPF2Q9HAU5 1272 aaKnown RBP6.61□□□□□ -1.35
PROM1-220ENST00000540805 NKTRP30414 1462 aaKnown RBP6.61□□□□□ -1.35
PROM1-220ENST00000540805 SEC24BO95487 1268 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 PDIA4P13667 645 aaKnown RBP6.61□□□□□ -1.35
PROM1-220ENST00000540805 PPP2R1AP30153 589 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 BBXQ8WY36 941 aaPredicted RBP6.61□□□□□ -1.35
PROM1-220ENST00000540805 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
PROM1-220ENST00000540805 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 PPP6R1Q9UPN7 881 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 CSB-PGBD3P0DP91 1061 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 MED14O60244 1454 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 MYH16Q9H6N6 1097 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 TOPAZ1Q8N9V7 1692 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 CPS1P31327 1500 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 NINLQ9Y2I6 1382 aa6.6□□□□□ -1.35
PROM1-220ENST00000540805 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.35
PROM1-220ENST00000540805 IGHDP01880 384 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.59□□□□□ -1.35
PROM1-220ENST00000540805 CLCN1P35523 988 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 JARID2Q92833 1246 aaPredicted RBP6.59□□□□□ -1.35
PROM1-220ENST00000540805 ANTXR1Q9H6X2 564 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 KIF20BQ96Q89 1820 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 NRKQ7Z2Y5 1582 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 BCAR3O75815 825 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 ZMYM3Q14202 1370 aa6.59□□□□□ -1.35
PROM1-220ENST00000540805 COL3A1P02461 1466 aaPredicted RBP6.59□□□□□ -1.35
PROM1-220ENST00000540805 CENPJQ9HC77 1338 aaPredicted RBP6.59□□□□□ -1.36
PROM1-220ENST00000540805 AKAP12Q02952 1782 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 PAXIP1Q6ZW49 1069 aaPredicted RBP6.58□□□□□ -1.36
PROM1-220ENST00000540805 TRMT2AQ8IZ69 625 aaKnown RBP6.58□□□□□ -1.36
PROM1-220ENST00000540805 CLUAP1Q96AJ1 413 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 E9PSI1 815 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 CDCA8Q53HL2 280 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 MON2Q7Z3U7 1717 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 CCDC146Q8IYE0 955 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 TECPR2O15040 1411 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 ADGRB2O60241 1585 aa6.58□□□□□ -1.36
PROM1-220ENST00000540805 FSD2A1L4K1 749 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 ZBTB22O15209 634 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 HDGFP51858 240 aaKnown RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 PUS7Q96PZ0 661 aaKnown RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 ZNF142P52746 1687 aaPredicted RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 GTF2E1P29083 439 aaPredicted RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 TBC1D32Q96NH3 1257 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 ADAMTS13Q76LX8 1427 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 MCM4P33991 863 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 SLIT1O75093 1534 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 METP08581 1390 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 RIMS2Q9UQ26 1411 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 APAF1O14727 1248 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 PMFBP1Q8TBY8 1022 aa6.57□□□□□ -1.36
PROM1-220ENST00000540805 SPINK5Q9NQ38 1064 aaPredicted RBP6.57□□□□□ -1.36
PROM1-220ENST00000540805 ARHGAP23Q9P227 1491 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 NSD3Q9BZ95 1437 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 VGFO15240 615 aaPredicted RBP6.56□□□□□ -1.36
PROM1-220ENST00000540805 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 COG6Q9Y2V7 657 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 MARF1Q9Y4F3 1742 aaKnown RBP6.56□□□□□ -1.36
PROM1-220ENST00000540805 MRE11P49959 708 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms