RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 USP6P35125 1406 aa27.14■■□□□ 1.93
DDX55-207ENST00000540763 ARHGEF10O15013 1369 aa27.13■■□□□ 1.93
DDX55-207ENST00000540763 CD163L1Q9NR16 1453 aa27.13■■□□□ 1.93
DDX55-207ENST00000540763 LRP6O75581 1613 aa27.12■■□□□ 1.93
DDX55-207ENST00000540763 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
DDX55-207ENST00000540763 ZNF692Q9BU19 519 aaPredicted RBP27.11■■□□□ 1.93
DDX55-207ENST00000540763 MEX3CQ5U5Q3 659 aaKnown RBP27.1■■□□□ 1.93
DDX55-207ENST00000540763 CRYBG1Q9Y4K1 1723 aa27.1■■□□□ 1.93
DDX55-207ENST00000540763 SSH2Q76I76 1423 aa27.09■■□□□ 1.93
DDX55-207ENST00000540763 MARF1Q9Y4F3 1742 aaKnown RBP27.08■■□□□ 1.93
DDX55-207ENST00000540763 TMC1Q8TDI8 760 aa27.06■■□□□ 1.92
DDX55-207ENST00000540763 TERF2IPQ9NYB0 399 aa27.06■■□□□ 1.92
DDX55-207ENST00000540763 SLC12A5Q9H2X9 1139 aa27.05■■□□□ 1.92
DDX55-207ENST00000540763 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
DDX55-207ENST00000540763 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
DDX55-207ENST00000540763 PIK3C2AO00443 1686 aa27.05■■□□□ 1.92
DDX55-207ENST00000540763 USP54Q70EL1 1684 aa27.05■■□□□ 1.92
DDX55-207ENST00000540763 ZNF772Q68DY9 489 aaPredicted RBP27.04■■□□□ 1.92
DDX55-207ENST00000540763 HDGFL2Q7Z4V5 671 aaPredicted RBP27.04■■□□□ 1.92
DDX55-207ENST00000540763 A0A1W2PP64 1363 aa27.04■■□□□ 1.92
DDX55-207ENST00000540763 EDC4Q6P2E9 1401 aaKnown RBP27.03■■□□□ 1.92
DDX55-207ENST00000540763 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
DDX55-207ENST00000540763 TTC21AQ8NDW8 1320 aa27.01■■□□□ 1.91
DDX55-207ENST00000540763 PAK3O75914 559 aaPredicted RBP27.01■■□□□ 1.91
DDX55-207ENST00000540763 TTC21BQ7Z4L5 1316 aa26.97■■□□□ 1.91
DDX55-207ENST00000540763 NUTM2BA6NNL0 878 aaPredicted RBP26.97■■□□□ 1.91
DDX55-207ENST00000540763 NUTM2EB1AL46 878 aaPredicted RBP26.97■■□□□ 1.91
DDX55-207ENST00000540763 NUTM2AQ8IVF1 878 aaPredicted RBP26.97■■□□□ 1.91
DDX55-207ENST00000540763 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
DDX55-207ENST00000540763 KIF20BQ96Q89 1820 aa26.95■■□□□ 1.9
DDX55-207ENST00000540763 KIF7Q2M1P5 1343 aa26.94■■□□□ 1.9
DDX55-207ENST00000540763 C11orf95C9JLR9 678 aaPredicted RBP26.94■■□□□ 1.9
DDX55-207ENST00000540763 ABTB2Q8N961 1025 aa26.94■■□□□ 1.9
DDX55-207ENST00000540763 SLIT3O75094 1523 aa26.94■■□□□ 1.9
DDX55-207ENST00000540763 USP19O94966 1318 aa26.92■■□□□ 1.9
DDX55-207ENST00000540763 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
DDX55-207ENST00000540763 USP31Q70CQ4 1352 aa26.9■■□□□ 1.9
DDX55-207ENST00000540763 CCDC7Q96M83 1385 aa26.9■■□□□ 1.9
DDX55-207ENST00000540763 RXRBP28702 533 aa26.89■■□□□ 1.9
DDX55-207ENST00000540763 POLR3GLQ9BT43 218 aa26.88■■□□□ 1.89
DDX55-207ENST00000540763 AFF2P51816 1311 aa26.88■■□□□ 1.89
DDX55-207ENST00000540763 NWD2Q9ULI1 1742 aa26.87■■□□□ 1.89
DDX55-207ENST00000540763 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.87■■□□□ 1.89
DDX55-207ENST00000540763 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
DDX55-207ENST00000540763 PLCH1Q4KWH8 1693 aa26.86■■□□□ 1.89
DDX55-207ENST00000540763 HAP1P54257 671 aaPredicted RBP26.86■■□□□ 1.89
DDX55-207ENST00000540763 CDK12Q9NYV4 1490 aaPredicted RBP26.86■■□□□ 1.89
DDX55-207ENST00000540763 ANKRD26Q9UPS8 1709 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 OVOS2A0A0J9YW53 1432 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 OVOS2Q6IE36 1432 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 NLRP6P59044 892 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 CABLES1Q8TDN4 633 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 WASHC2AQ641Q2 1341 aa26.85■■□□□ 1.89
DDX55-207ENST00000540763 NSD3Q9BZ95 1437 aa26.84■■□□□ 1.89
DDX55-207ENST00000540763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.84■■□□□ 1.89
DDX55-207ENST00000540763 NUTM2GQ5VZR2 741 aa26.83■■□□□ 1.89
DDX55-207ENST00000540763 ADAMTS2O95450 1211 aa26.82■■□□□ 1.88
DDX55-207ENST00000540763 UPF1Q92900 1129 aaKnown RBP eCLIP26.82■■□□□ 1.88
DDX55-207ENST00000540763 CPDO75976 1380 aa26.82■■□□□ 1.88
DDX55-207ENST00000540763 NFAT5O94916 1531 aa26.81■■□□□ 1.88
DDX55-207ENST00000540763 NME9Q86XW9 330 aa26.81■■□□□ 1.88
DDX55-207ENST00000540763 C8orf37Q96NL8 207 aa26.81■■□□□ 1.88
DDX55-207ENST00000540763 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
DDX55-207ENST00000540763 SLIT2O94813 1529 aa26.8■■□□□ 1.88
DDX55-207ENST00000540763 GCP02774 474 aa26.79■■□□□ 1.88
DDX55-207ENST00000540763 KCNH5Q8NCM2 988 aa26.79■■□□□ 1.88
DDX55-207ENST00000540763 PANK3Q9H999 370 aa26.78■■□□□ 1.88
DDX55-207ENST00000540763 ABCC6O95255 1503 aa26.78■■□□□ 1.88
DDX55-207ENST00000540763 LMO7Q8WWI1 1683 aa26.78■■□□□ 1.88
DDX55-207ENST00000540763 NRAPQ86VF7 1730 aa26.78■■□□□ 1.88
DDX55-207ENST00000540763 LTN1O94822 1766 aa26.77■■□□□ 1.88
DDX55-207ENST00000540763 FNBP4Q8N3X1 1017 aaPredicted RBP26.77■■□□□ 1.88
DDX55-207ENST00000540763 CGNL1Q0VF96 1302 aa26.76■■□□□ 1.87
DDX55-207ENST00000540763 NGLY1Q96IV0 654 aa26.76■■□□□ 1.87
DDX55-207ENST00000540763 KIAA0232Q92628 1395 aa26.75■■□□□ 1.87
DDX55-207ENST00000540763 FYB1O15117 783 aa26.75■■□□□ 1.87
DDX55-207ENST00000540763 PLEKHG5O94827 1062 aa26.75■■□□□ 1.87
DDX55-207ENST00000540763 NSD2O96028 1365 aa26.74■■□□□ 1.87
DDX55-207ENST00000540763 COG3Q96JB2 828 aa26.74■■□□□ 1.87
DDX55-207ENST00000540763 QTRT2Q9H974 415 aaKnown RBP26.74■■□□□ 1.87
DDX55-207ENST00000540763 COL18A1P39060 1754 aa26.74■■□□□ 1.87
DDX55-207ENST00000540763 RBM6P78332 1123 aaKnown RBP26.73■■□□□ 1.87
DDX55-207ENST00000540763 ZRANB1Q9UGI0 708 aa26.73■■□□□ 1.87
DDX55-207ENST00000540763 PRDM11Q9NQV5 511 aa26.72■■□□□ 1.87
DDX55-207ENST00000540763 BCL9LQ86UU0 1499 aa26.72■■□□□ 1.87
DDX55-207ENST00000540763 FAM83GA6ND36 823 aa26.71■■□□□ 1.87
DDX55-207ENST00000540763 RGS12O14924 1447 aa26.71■■□□□ 1.87
DDX55-207ENST00000540763 ZC3H6P61129 1189 aaKnown RBP26.69■■□□□ 1.86
DDX55-207ENST00000540763 AATKQ6ZMQ8 1374 aa26.69■■□□□ 1.86
DDX55-207ENST00000540763 GGNBP2Q9H3C7 697 aa26.68■■□□□ 1.86
DDX55-207ENST00000540763 USP21Q9UK80 565 aa26.68■■□□□ 1.86
DDX55-207ENST00000540763 KNSTRNQ9Y448 316 aa26.68■■□□□ 1.86
DDX55-207ENST00000540763 RGPD5Q99666 1765 aa26.67■■□□□ 1.86
DDX55-207ENST00000540763 ARHGEF25Q86VW2 580 aa26.67■■□□□ 1.86
DDX55-207ENST00000540763 ATRNO75882 1429 aa26.66■■□□□ 1.86
DDX55-207ENST00000540763 PER1O15534 1290 aaPredicted RBP26.65■■□□□ 1.86
DDX55-207ENST00000540763 UNC5CLQ8IV45 518 aa26.65■■□□□ 1.86
DDX55-207ENST00000540763 CAMTA1Q9Y6Y1 1673 aa26.65■■□□□ 1.86
DDX55-207ENST00000540763 NPC1L1Q9UHC9 1359 aa26.64■■□□□ 1.86
DDX55-207ENST00000540763 MAP2P11137 1827 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms