RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
C11orf54-214ENST00000540113 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
C11orf54-214ENST00000540113 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
C11orf54-214ENST00000540113 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
C11orf54-214ENST00000540113 METP08581 1390 aa14.91□□□□□ -0.02
C11orf54-214ENST00000540113 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
C11orf54-214ENST00000540113 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
C11orf54-214ENST00000540113 CLUAP1Q96AJ1 413 aa14.91□□□□□ -0.02
C11orf54-214ENST00000540113 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
C11orf54-214ENST00000540113 UBR1Q8IWV7 1749 aa14.9□□□□□ -0.02
C11orf54-214ENST00000540113 FBLN1P23142 703 aa14.9□□□□□ -0.02
C11orf54-214ENST00000540113 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
C11orf54-214ENST00000540113 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
C11orf54-214ENST00000540113 RLBP1P12271 317 aa14.89□□□□□ -0.03
C11orf54-214ENST00000540113 TNRQ92752 1358 aa14.89□□□□□ -0.03
C11orf54-214ENST00000540113 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
C11orf54-214ENST00000540113 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
C11orf54-214ENST00000540113 ATP7BP35670 1465 aa14.88□□□□□ -0.03
C11orf54-214ENST00000540113 CCDC27Q2M243 656 aa14.87□□□□□ -0.03
C11orf54-214ENST00000540113 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
C11orf54-214ENST00000540113 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
C11orf54-214ENST00000540113 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.87□□□□□ -0.03
C11orf54-214ENST00000540113 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
C11orf54-214ENST00000540113 CPS1P31327 1500 aa14.86□□□□□ -0.03
C11orf54-214ENST00000540113 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
C11orf54-214ENST00000540113 TECPR2O15040 1411 aa14.86□□□□□ -0.03
C11orf54-214ENST00000540113 ZBTB22O15209 634 aa14.85□□□□□ -0.03
C11orf54-214ENST00000540113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.85□□□□□ -0.03
C11orf54-214ENST00000540113 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
C11orf54-214ENST00000540113 PNPLA6Q8IY17 1366 aa14.85□□□□□ -0.03
C11orf54-214ENST00000540113 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
C11orf54-214ENST00000540113 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
C11orf54-214ENST00000540113 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
C11orf54-214ENST00000540113 TMEM2Q9UHN6 1383 aa14.84□□□□□ -0.03
C11orf54-214ENST00000540113 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
C11orf54-214ENST00000540113 RTL5Q5HYW3 569 aaPredicted RBP14.84□□□□□ -0.03
C11orf54-214ENST00000540113 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.03
C11orf54-214ENST00000540113 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.03
C11orf54-214ENST00000540113 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.03
C11orf54-214ENST00000540113 WASLO00401 505 aaPredicted RBP14.83□□□□□ -0.04
C11orf54-214ENST00000540113 PCDHB15Q9Y5E8 787 aa14.83□□□□□ -0.04
C11orf54-214ENST00000540113 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.04
C11orf54-214ENST00000540113 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
C11orf54-214ENST00000540113 TMPOP42166 694 aaKnown RBP14.82□□□□□ -0.04
C11orf54-214ENST00000540113 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
C11orf54-214ENST00000540113 TRIM35Q9UPQ4 493 aa14.82□□□□□ -0.04
C11orf54-214ENST00000540113 NEFMP07197 916 aa14.81□□□□□ -0.04
C11orf54-214ENST00000540113 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
C11orf54-214ENST00000540113 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
C11orf54-214ENST00000540113 LRRC7Q96NW7 1537 aa14.81□□□□□ -0.04
C11orf54-214ENST00000540113 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
C11orf54-214ENST00000540113 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
C11orf54-214ENST00000540113 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
C11orf54-214ENST00000540113 ROBO2Q9HCK4 1378 aa14.8□□□□□ -0.04
C11orf54-214ENST00000540113 DIAPH1O60610 1272 aaKnown RBP14.8□□□□□ -0.04
C11orf54-214ENST00000540113 SEC24BO95487 1268 aa14.8□□□□□ -0.04
C11orf54-214ENST00000540113 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
C11orf54-214ENST00000540113 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
C11orf54-214ENST00000540113 ITSN1Q15811 1721 aa14.79□□□□□ -0.04
C11orf54-214ENST00000540113 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.79□□□□□ -0.04
C11orf54-214ENST00000540113 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
C11orf54-214ENST00000540113 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
C11orf54-214ENST00000540113 HDGFP51858 240 aaKnown RBP14.78□□□□□ -0.04
C11orf54-214ENST00000540113 RIPK4P57078 832 aa14.78□□□□□ -0.04
C11orf54-214ENST00000540113 NUDT16Q96DE0 195 aaKnown RBP14.78□□□□□ -0.04
C11orf54-214ENST00000540113 C3P01024 1663 aa14.78□□□□□ -0.04
C11orf54-214ENST00000540113 NME9Q86XW9 330 aa14.78□□□□□ -0.04
C11orf54-214ENST00000540113 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
C11orf54-214ENST00000540113 PRR36Q9H6K5 1346 aa14.78□□□□□ -0.04
C11orf54-214ENST00000540113 LTKP29376 864 aa14.77□□□□□ -0.04
C11orf54-214ENST00000540113 CEBPAP49715 358 aaPredicted RBP14.77□□□□□ -0.04
C11orf54-214ENST00000540113 SMC4Q9NTJ3 1288 aa14.77□□□□□ -0.05
C11orf54-214ENST00000540113 TOPAZ1Q8N9V7 1692 aa14.76□□□□□ -0.05
C11orf54-214ENST00000540113 PLEKHG1Q9ULL1 1385 aa14.76□□□□□ -0.05
C11orf54-214ENST00000540113 HMOX1P09601 288 aa14.76□□□□□ -0.05
C11orf54-214ENST00000540113 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
C11orf54-214ENST00000540113 FTSJ3Q8IY81 847 aaKnown RBP14.75□□□□□ -0.05
C11orf54-214ENST00000540113 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
C11orf54-214ENST00000540113 PDZRN3Q9UPQ7 1066 aa14.75□□□□□ -0.05
C11orf54-214ENST00000540113 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
C11orf54-214ENST00000540113 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
C11orf54-214ENST00000540113 NRKQ7Z2Y5 1582 aa14.75□□□□□ -0.05
C11orf54-214ENST00000540113 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
C11orf54-214ENST00000540113 CDK12Q9NYV4 1490 aaPredicted RBP14.74□□□□□ -0.05
C11orf54-214ENST00000540113 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
C11orf54-214ENST00000540113 MVPQ14764 893 aaKnown RBP14.74□□□□□ -0.05
C11orf54-214ENST00000540113 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
C11orf54-214ENST00000540113 RSPH6AQ9H0K4 717 aa14.74□□□□□ -0.05
C11orf54-214ENST00000540113 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
C11orf54-214ENST00000540113 THUMPD2Q9BTF0 503 aaKnown RBP14.74□□□□□ -0.05
C11orf54-214ENST00000540113 TRIM27P14373 513 aa14.73□□□□□ -0.05
C11orf54-214ENST00000540113 PRKAR2BP31323 418 aa14.73□□□□□ -0.05
C11orf54-214ENST00000540113 PMFBP1Q8TBY8 1022 aa14.73□□□□□ -0.05
C11orf54-214ENST00000540113 NOB1Q9ULX3 412 aaKnown RBP14.73□□□□□ -0.05
C11orf54-214ENST00000540113 USP19O94966 1318 aa14.73□□□□□ -0.05
C11orf54-214ENST00000540113 AATKQ6ZMQ8 1374 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 IL16Q14005 1332 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 FCHSD2O94868 740 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 PHACTR3Q96KR7 559 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 ARHGAP23Q9P227 1491 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms