RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 CARD14Q9BXL6 1004 aa24.28■■□□□ 1.48
COPS7A-210ENST00000539735 PHF8Q9UPP1 1060 aa24.28■■□□□ 1.48
COPS7A-210ENST00000539735 PMFBP1Q8TBY8 1022 aa24.28■■□□□ 1.48
COPS7A-210ENST00000539735 NPC1L1Q9UHC9 1359 aa24.27■■□□□ 1.48
COPS7A-210ENST00000539735 PUS7Q96PZ0 661 aaKnown RBP24.26■■□□□ 1.47
COPS7A-210ENST00000539735 SLC12A5Q9H2X9 1139 aa24.26■■□□□ 1.47
COPS7A-210ENST00000539735 CCDC61Q9Y6R9 512 aa24.26■■□□□ 1.47
COPS7A-210ENST00000539735 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
COPS7A-210ENST00000539735 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
COPS7A-210ENST00000539735 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-210ENST00000539735 B4GALNT3Q6L9W6 998 aa24.23■■□□□ 1.47
COPS7A-210ENST00000539735 ATP7BP35670 1465 aa24.22■■□□□ 1.47
COPS7A-210ENST00000539735 SENP3-EIF4A1A0A087X0R7 540 aa24.21■■□□□ 1.47
COPS7A-210ENST00000539735 NGDNQ8NEJ9 315 aaKnown RBP24.21■■□□□ 1.47
COPS7A-210ENST00000539735 PSME1Q06323 249 aa24.21■■□□□ 1.47
COPS7A-210ENST00000539735 NSD3Q9BZ95 1437 aa24.2■■□□□ 1.46
COPS7A-210ENST00000539735 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
COPS7A-210ENST00000539735 CABP1Q9NZU7 370 aa24.19■■□□□ 1.46
COPS7A-210ENST00000539735 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-210ENST00000539735 LRRC59Q96AG4 307 aaKnown RBP24.18■■□□□ 1.46
COPS7A-210ENST00000539735 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
COPS7A-210ENST00000539735 KRT28Q7Z3Y7 464 aa24.17■■□□□ 1.46
COPS7A-210ENST00000539735 PPIP5K1Q6PFW1 1433 aa24.17■■□□□ 1.46
COPS7A-210ENST00000539735 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
COPS7A-210ENST00000539735 PHLPP1O60346 1717 aa24.16■■□□□ 1.46
COPS7A-210ENST00000539735 PLEKHG3A1L390 1219 aa24.16■■□□□ 1.46
COPS7A-210ENST00000539735 RGPD8O14715 1765 aaPredicted RBP24.15■■□□□ 1.46
COPS7A-210ENST00000539735 ACEP12821 1306 aa24.15■■□□□ 1.46
COPS7A-210ENST00000539735 ANKRD36BQ8N2N9 1353 aa24.13■■□□□ 1.45
COPS7A-210ENST00000539735 KIF1AQ12756 1690 aa24.13■■□□□ 1.45
COPS7A-210ENST00000539735 NHSL1Q5SYE7 1610 aa24.12■■□□□ 1.45
COPS7A-210ENST00000539735 RRP1P56182 461 aaKnown RBP24.12■■□□□ 1.45
COPS7A-210ENST00000539735 RCAN3Q9UKA8 241 aa24.12■■□□□ 1.45
COPS7A-210ENST00000539735 FANCIQ9NVI1 1328 aa24.12■■□□□ 1.45
COPS7A-210ENST00000539735 JCADQ9P266 1359 aa24.12■■□□□ 1.45
COPS7A-210ENST00000539735 COL16A1Q07092 1604 aaPredicted RBP24.11■■□□□ 1.45
COPS7A-210ENST00000539735 PXDNQ92626 1479 aa24.11■■□□□ 1.45
COPS7A-210ENST00000539735 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
COPS7A-210ENST00000539735 PAK3O75914 559 aaPredicted RBP24.1■■□□□ 1.45
COPS7A-210ENST00000539735 LMOD2Q6P5Q4 547 aa24.1■■□□□ 1.45
COPS7A-210ENST00000539735 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
COPS7A-210ENST00000539735 POLR3AO14802 1390 aaPredicted RBP24.09■■□□□ 1.45
COPS7A-210ENST00000539735 MORC1Q86VD1 984 aa24.08■■□□□ 1.45
COPS7A-210ENST00000539735 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.45
COPS7A-210ENST00000539735 WDR43Q15061 677 aaKnown RBP eCLIP24.07■■□□□ 1.44
COPS7A-210ENST00000539735 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
COPS7A-210ENST00000539735 ADAMTS8Q9UP79 889 aa24.07■■□□□ 1.44
COPS7A-210ENST00000539735 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
COPS7A-210ENST00000539735 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
COPS7A-210ENST00000539735 A0A1W2PP64 1363 aa24.06■■□□□ 1.44
COPS7A-210ENST00000539735 ANP32EQ9BTT0 268 aa24.05■■□□□ 1.44
COPS7A-210ENST00000539735 TOPAZ1Q8N9V7 1692 aa24.05■■□□□ 1.44
COPS7A-210ENST00000539735 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
COPS7A-210ENST00000539735 PNPLA6Q8IY17 1366 aa24.04■■□□□ 1.44
COPS7A-210ENST00000539735 ZNF692Q9BU19 519 aaPredicted RBP24.04■■□□□ 1.44
COPS7A-210ENST00000539735 PLEKHG5O94827 1062 aa24.03■■□□□ 1.44
COPS7A-210ENST00000539735 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
COPS7A-210ENST00000539735 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
COPS7A-210ENST00000539735 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
COPS7A-210ENST00000539735 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
COPS7A-210ENST00000539735 TERF2IPQ9NYB0 399 aa24.03■■□□□ 1.44
COPS7A-210ENST00000539735 HDGFL2Q7Z4V5 671 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-210ENST00000539735 TNS3Q68CZ2 1445 aa24.02■■□□□ 1.44
COPS7A-210ENST00000539735 SPATA31A6Q5VVP1 1343 aa24.01■■□□□ 1.43
COPS7A-210ENST00000539735 CDCA7LQ96GN5 454 aa24.01■■□□□ 1.43
COPS7A-210ENST00000539735 NSD2O96028 1365 aa24■■□□□ 1.43
COPS7A-210ENST00000539735 CD163L1Q9NR16 1453 aa24■■□□□ 1.43
COPS7A-210ENST00000539735 USP6P35125 1406 aa23.99■■□□□ 1.43
COPS7A-210ENST00000539735 ARHGEF10O15013 1369 aa23.99■■□□□ 1.43
COPS7A-210ENST00000539735 CPSF1Q10570 1443 aaKnown RBP23.98■■□□□ 1.43
COPS7A-210ENST00000539735 ABTB2Q8N961 1025 aa23.98■■□□□ 1.43
COPS7A-210ENST00000539735 NUTM2GQ5VZR2 741 aa23.98■■□□□ 1.43
COPS7A-210ENST00000539735 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
COPS7A-210ENST00000539735 HAP1P54257 671 aaPredicted RBP23.96■■□□□ 1.43
COPS7A-210ENST00000539735 ZNF521Q96K83 1311 aa23.95■■□□□ 1.43
COPS7A-210ENST00000539735 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
COPS7A-210ENST00000539735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
COPS7A-210ENST00000539735 TTC21BQ7Z4L5 1316 aa23.94■■□□□ 1.42
COPS7A-210ENST00000539735 SHPRHQ149N8 1683 aa23.94■■□□□ 1.42
COPS7A-210ENST00000539735 ADAMTS2O95450 1211 aa23.94■■□□□ 1.42
COPS7A-210ENST00000539735 EXOC6Q8TAG9 804 aa23.93■■□□□ 1.42
COPS7A-210ENST00000539735 GGNBP2Q9H3C7 697 aa23.93■■□□□ 1.42
COPS7A-210ENST00000539735 MTHFSP49914 203 aa23.91■■□□□ 1.42
COPS7A-210ENST00000539735 TRPM3Q9HCF6 1732 aaPredicted RBP23.91■■□□□ 1.42
COPS7A-210ENST00000539735 SSH2Q76I76 1423 aa23.91■■□□□ 1.42
COPS7A-210ENST00000539735 FYB1O15117 783 aa23.91■■□□□ 1.42
COPS7A-210ENST00000539735 NLRP6P59044 892 aa23.91■■□□□ 1.42
COPS7A-210ENST00000539735 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
COPS7A-210ENST00000539735 NGEFQ8N5V2 710 aa23.89■■□□□ 1.42
COPS7A-210ENST00000539735 TTC21AQ8NDW8 1320 aa23.89■■□□□ 1.42
COPS7A-210ENST00000539735 LRP6O75581 1613 aa23.89■■□□□ 1.41
COPS7A-210ENST00000539735 MSH5O43196 834 aa23.88■■□□□ 1.41
COPS7A-210ENST00000539735 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
COPS7A-210ENST00000539735 EDC4Q6P2E9 1401 aaKnown RBP23.88■■□□□ 1.41
COPS7A-210ENST00000539735 DUSP27Q5VZP5 1158 aa23.87■■□□□ 1.41
COPS7A-210ENST00000539735 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
COPS7A-210ENST00000539735 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
COPS7A-210ENST00000539735 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
COPS7A-210ENST00000539735 NME9Q86XW9 330 aa23.86■■□□□ 1.41
COPS7A-210ENST00000539735 ANKRD26Q9UPS8 1709 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms