RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ZPR1O75312 459 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 MSS51Q4VC12 460 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 NKX2-3Q8TAU0 364 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 OCSTAMPQ9BR26 566 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 PPP1R12CQ9BZL4 782 aa5.84□□□□□ -1.47
SNHG1-210ENST00000539303 CARNS1A5YM72 827 aa5.83□□□□□ -1.48
SNHG1-210ENST00000539303 PALM3A6NDB9 673 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-210ENST00000539303 PIK3CDO00329 1044 aa5.83□□□□□ -1.48
SNHG1-210ENST00000539303 CCNYL3P0C7X3 344 aa5.83□□□□□ -1.48
SNHG1-210ENST00000539303 PDIA4P13667 645 aaKnown RBP5.83□□□□□ -1.48
SNHG1-210ENST00000539303 MMP16P51512 607 aa5.83□□□□□ -1.48
SNHG1-210ENST00000539303 PTCRAQ6ISU1 281 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-210ENST00000539303 ZBBXA8MT70 800 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 ADH1BP00325 375 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 SRPK2P78362 688 aaKnown RBP5.82□□□□□ -1.48
SNHG1-210ENST00000539303 NR1H3Q13133 447 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 SEMA3FQ13275 785 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 CDCA8Q53HL2 280 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 TJAP1Q5JTD0 557 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 TBC1D9Q6ZT07 1266 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 EVA1BQ9NVM1 165 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 PODXL2Q9NZ53 605 aa5.82□□□□□ -1.48
SNHG1-210ENST00000539303 TFIP11Q9UBB9 837 aaKnown RBP5.82□□□□□ -1.48
SNHG1-210ENST00000539303 LMOD1P29536 600 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-210ENST00000539303 KCNH2Q12809 1159 aa5.81□□□□□ -1.48
SNHG1-210ENST00000539303 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
SNHG1-210ENST00000539303 FAM174AQ8TBP5 190 aa5.8□□□□□ -1.48
SNHG1-210ENST00000539303 PBXIP1Q96AQ6 731 aa5.8□□□□□ -1.48
SNHG1-210ENST00000539303 S1PR4O95977 384 aa5.79□□□□□ -1.48
SNHG1-210ENST00000539303 EIF4G2P78344 907 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNHG1-210ENST00000539303 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
SNHG1-210ENST00000539303 UNC93B1Q9H1C4 597 aa5.79□□□□□ -1.48
SNHG1-210ENST00000539303 MAFBQ9Y5Q3 323 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-210ENST00000539303 SOX11P35716 441 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 LINC01559Q495D7 138 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 NYAP1Q6ZVC0 841 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 PNMA1Q8ND90 353 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 TRAIPQ9BWF2 469 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 IL21Q9HBE4 155 aa5.78□□□□□ -1.48
SNHG1-210ENST00000539303 ZC3H4Q9UPT8 1303 aaKnown RBP5.77□□□□□ -1.49
SNHG1-210ENST00000539303 PPEF1O14829 653 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-210ENST00000539303 ATP9BO43861 1147 aa5.77□□□□□ -1.49
SNHG1-210ENST00000539303 PPP1R15AO75807 674 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-210ENST00000539303 DEPDC4Q8N2C3 294 aa5.77□□□□□ -1.49
SNHG1-210ENST00000539303 MYT1LQ9UL68 1186 aa5.77□□□□□ -1.49
SNHG1-210ENST00000539303 FCF1Q9Y324 198 aaKnown RBP5.77□□□□□ -1.49
SNHG1-210ENST00000539303 TSGA10IPQ3SY00 556 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 PDXDC2PQ6P474 469 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 SH3BP5LQ7L8J4 393 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 ADAM32Q8TC27 787 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 BAP1Q92560 729 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 FOXJ1Q92949 421 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 CARD14Q9BXL6 1004 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 PCDHB9Q9Y5E1 797 aa5.76□□□□□ -1.49
SNHG1-210ENST00000539303 MAGEB6P1A0A0J9YX57 407 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 SKIP12755 728 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 PTK2Q05397 1052 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 C4orf48Q5BLP8 95 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 NBPF14Q5TI25 921 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 AEBP1Q8IUX7 1158 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 ARHGAP9Q9BRR9 750 aa5.75□□□□□ -1.49
SNHG1-210ENST00000539303 USP17L3A6NCW0 530 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 USP17L4A6NCW7 530 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 USP17L5A8MUK1 530 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 PLA2G2CQ5R387 149 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 KANK4Q5T7N3 995 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-210ENST00000539303 USP17L2Q6R6M4 530 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 USP17L1Q7RTZ2 530 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 ARMC2Q8NEN0 867 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 CEP126Q9P2H0 1117 aa5.74□□□□□ -1.49
SNHG1-210ENST00000539303 ACIN1Q9UKV3 1341 aaKnown RBP5.74□□□□□ -1.49
SNHG1-210ENST00000539303 SH3RF1Q7Z6J0 888 aa5.73□□□□□ -1.49
SNHG1-210ENST00000539303 PHTF2Q8N3S3 785 aa5.73□□□□□ -1.49
SNHG1-210ENST00000539303 GPKOWQ92917 476 aaPredicted RBP eCLIP5.73□□□□□ -1.497e-32■■■□□ 17.2
SNHG1-210ENST00000539303 ZMIZ1Q9ULJ6 1067 aa5.73□□□□□ -1.49
SNHG1-210ENST00000539303 GPSM3Q9Y4H4 160 aa5.73□□□□□ -1.49
SNHG1-210ENST00000539303 NCOA4Q13772 614 aa5.72□□□□□ -1.49
SNHG1-210ENST00000539303 ZBTB33Q86T24 672 aa5.72□□□□□ -1.49
SNHG1-210ENST00000539303 ZNF511Q8NB15 262 aa5.72□□□□□ -1.49
SNHG1-210ENST00000539303 STK32AQ8WU08 396 aa5.72□□□□□ -1.49
SNHG1-210ENST00000539303 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 TMEM88BA6NKF7 163 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 RNF223E7ERA6 249 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 ATG7O95352 703 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 CSB-PGBD3P0DP91 1061 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 SLFNL1Q499Z3 407 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 ERFEQ4G0M1 354 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 RNF135Q8IUD6 432 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 PLPP7Q8NBV4 271 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 RNF166Q96A37 237 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-210ENST00000539303 CCDC85AQ96PX6 553 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-210ENST00000539303 VRTNQ9H8Y1 702 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 HCSTQ9UBK5 93 aa5.71□□□□□ -1.5
SNHG1-210ENST00000539303 GIGYF1O75420 1035 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-210ENST00000539303 SH3BP2P78314 561 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 MMRN1Q13201 1228 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 AGERQ15109 404 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 CRTC2Q53ET0 693 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms