RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ALS2Q96Q42 1657 aa20.25■□□□□ 0.83
CCND1-204ENST00000539241 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
CCND1-204ENST00000539241 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
CCND1-204ENST00000539241 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
CCND1-204ENST00000539241 A0A0G2JS52 829 aa20.21■□□□□ 0.83
CCND1-204ENST00000539241 MYT1Q01538 1121 aa20.21■□□□□ 0.83
CCND1-204ENST00000539241 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
CCND1-204ENST00000539241 PRDM11Q9NQV5 511 aa20.21■□□□□ 0.83
CCND1-204ENST00000539241 CCDC61Q9Y6R9 512 aa20.21■□□□□ 0.83
CCND1-204ENST00000539241 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
CCND1-204ENST00000539241 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
CCND1-204ENST00000539241 ACEP12821 1306 aa20.2■□□□□ 0.82
CCND1-204ENST00000539241 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
CCND1-204ENST00000539241 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
CCND1-204ENST00000539241 COL14A1Q05707 1796 aaKnown RBP20.18■□□□□ 0.82
CCND1-204ENST00000539241 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
CCND1-204ENST00000539241 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
CCND1-204ENST00000539241 ITSN1Q15811 1721 aa20.18■□□□□ 0.82
CCND1-204ENST00000539241 NRAPQ86VF7 1730 aa20.18■□□□□ 0.82
CCND1-204ENST00000539241 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
CCND1-204ENST00000539241 DEFB132Q7Z7B7 95 aa20.17■□□□□ 0.82
CCND1-204ENST00000539241 SPATA31A5Q5VU36 1347 aa20.17■□□□□ 0.82
CCND1-204ENST00000539241 SPATA31A7Q8IWB4 1347 aa20.17■□□□□ 0.82
CCND1-204ENST00000539241 KIAA0232Q92628 1395 aa20.17■□□□□ 0.82
CCND1-204ENST00000539241 SRPK2P78362 688 aaKnown RBP20.16■□□□□ 0.82
CCND1-204ENST00000539241 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
CCND1-204ENST00000539241 CHRNA2Q15822 529 aa20.15■□□□□ 0.82
CCND1-204ENST00000539241 L3MBTL2Q969R5 705 aa20.15■□□□□ 0.82
CCND1-204ENST00000539241 CRYBG1Q9Y4K1 1723 aa20.14■□□□□ 0.81
CCND1-204ENST00000539241 ZC3H6P61129 1189 aaKnown RBP20.14■□□□□ 0.81
CCND1-204ENST00000539241 TOPAZ1Q8N9V7 1692 aa20.13■□□□□ 0.81
CCND1-204ENST00000539241 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
CCND1-204ENST00000539241 CABP2Q9NPB3 220 aa20.13■□□□□ 0.81
CCND1-204ENST00000539241 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
CCND1-204ENST00000539241 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
CCND1-204ENST00000539241 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
CCND1-204ENST00000539241 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
CCND1-204ENST00000539241 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
CCND1-204ENST00000539241 PHRF1Q9P1Y6 1649 aaKnown RBP20.09■□□□□ 0.81
CCND1-204ENST00000539241 USP19O94966 1318 aa20.08■□□□□ 0.81
CCND1-204ENST00000539241 BAG6P46379 1132 aa20.08■□□□□ 0.81
CCND1-204ENST00000539241 NEUROD1Q13562 356 aa20.08■□□□□ 0.81
CCND1-204ENST00000539241 FAM182BQ5T319 152 aa20.07■□□□□ 0.8
CCND1-204ENST00000539241 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
CCND1-204ENST00000539241 CABP1Q9NZU7 370 aa20.07■□□□□ 0.8
CCND1-204ENST00000539241 EVA1CP58658 441 aa20.06■□□□□ 0.8
CCND1-204ENST00000539241 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
CCND1-204ENST00000539241 CPDO75976 1380 aa20.06■□□□□ 0.8
CCND1-204ENST00000539241 SSH2Q76I76 1423 aa20.05■□□□□ 0.8
CCND1-204ENST00000539241 GCP02774 474 aa20.05■□□□□ 0.8
CCND1-204ENST00000539241 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
CCND1-204ENST00000539241 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
CCND1-204ENST00000539241 EVC2Q86UK5 1308 aa20.04■□□□□ 0.8
CCND1-204ENST00000539241 NRKQ7Z2Y5 1582 aa20.04■□□□□ 0.8
CCND1-204ENST00000539241 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
CCND1-204ENST00000539241 QRICH2Q9H0J4 1663 aa20.03■□□□□ 0.8
CCND1-204ENST00000539241 USP6P35125 1406 aa20.02■□□□□ 0.8
CCND1-204ENST00000539241 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
CCND1-204ENST00000539241 BARGINQ6ZT62 677 aa20.02■□□□□ 0.8
CCND1-204ENST00000539241 CAMTA1Q9Y6Y1 1673 aa20.01■□□□□ 0.79
CCND1-204ENST00000539241 NLRP6P59044 892 aa20■□□□□ 0.79
CCND1-204ENST00000539241 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
CCND1-204ENST00000539241 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
CCND1-204ENST00000539241 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
CCND1-204ENST00000539241 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
CCND1-204ENST00000539241 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
CCND1-204ENST00000539241 DISP2A7MBM2 1401 aa19.97■□□□□ 0.79
CCND1-204ENST00000539241 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
CCND1-204ENST00000539241 PDE3BQ13370 1112 aa19.97■□□□□ 0.79
CCND1-204ENST00000539241 PSDA5PKW4 1024 aaPredicted RBP19.96■□□□□ 0.79
CCND1-204ENST00000539241 TRIM37O94972 964 aa19.96■□□□□ 0.79
CCND1-204ENST00000539241 THRAP3Q9Y2W1 955 aaKnown RBP19.96■□□□□ 0.79
CCND1-204ENST00000539241 COL5A2P05997 1499 aaPredicted RBP19.95■□□□□ 0.78
CCND1-204ENST00000539241 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
CCND1-204ENST00000539241 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
CCND1-204ENST00000539241 RGPD1P0DJD0 1748 aa19.94■□□□□ 0.78
CCND1-204ENST00000539241 SLIT3O75094 1523 aa19.94■□□□□ 0.78
CCND1-204ENST00000539241 TTC21BQ7Z4L5 1316 aa19.94■□□□□ 0.78
CCND1-204ENST00000539241 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
CCND1-204ENST00000539241 CRB1P82279 1406 aa19.92■□□□□ 0.78
CCND1-204ENST00000539241 APBA3O96018 575 aa19.91■□□□□ 0.78
CCND1-204ENST00000539241 CAMKK2Q96RR4 588 aa19.91■□□□□ 0.78
CCND1-204ENST00000539241 CARD11Q9BXL7 1154 aa19.9■□□□□ 0.78
CCND1-204ENST00000539241 TTC21AQ8NDW8 1320 aa19.9■□□□□ 0.78
CCND1-204ENST00000539241 PIK3C2AO00443 1686 aa19.89■□□□□ 0.77
CCND1-204ENST00000539241 CPSF1Q10570 1443 aaKnown RBP19.89■□□□□ 0.77
CCND1-204ENST00000539241 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.77
CCND1-204ENST00000539241 TNS1Q9HBL0 1735 aaKnown RBP19.89■□□□□ 0.77
CCND1-204ENST00000539241 SBNO2Q9Y2G9 1366 aa19.89■□□□□ 0.77
CCND1-204ENST00000539241 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
CCND1-204ENST00000539241 R3HDM1Q15032 1099 aaKnown RBP19.88■□□□□ 0.77
CCND1-204ENST00000539241 TOM1L2Q6ZVM7 507 aa19.88■□□□□ 0.77
CCND1-204ENST00000539241 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
CCND1-204ENST00000539241 AXIN2Q9Y2T1 843 aa19.88■□□□□ 0.77
CCND1-204ENST00000539241 PARD3Q8TEW0 1356 aa19.87■□□□□ 0.77
CCND1-204ENST00000539241 SOX12O15370 315 aa19.87■□□□□ 0.77
CCND1-204ENST00000539241 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
CCND1-204ENST00000539241 WDR17Q8IZU2 1322 aa19.86■□□□□ 0.77
CCND1-204ENST00000539241 LRP5O75197 1615 aa19.85■□□□□ 0.77
CCND1-204ENST00000539241 C11orf95C9JLR9 678 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms