RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 USP21Q9UK80 565 aa17.46■□□□□ 0.39
CLTCL1-205ENST00000538828 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
CLTCL1-205ENST00000538828 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
CLTCL1-205ENST00000538828 SLIT2O94813 1529 aa17.46■□□□□ 0.39
CLTCL1-205ENST00000538828 ABCA3Q99758 1704 aa17.45■□□□□ 0.38
CLTCL1-205ENST00000538828 ATRNO75882 1429 aa17.45■□□□□ 0.38
CLTCL1-205ENST00000538828 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
CLTCL1-205ENST00000538828 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
CLTCL1-205ENST00000538828 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
CLTCL1-205ENST00000538828 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
CLTCL1-205ENST00000538828 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
CLTCL1-205ENST00000538828 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
CLTCL1-205ENST00000538828 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
CLTCL1-205ENST00000538828 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
CLTCL1-205ENST00000538828 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
CLTCL1-205ENST00000538828 USP6P35125 1406 aa17.4■□□□□ 0.38
CLTCL1-205ENST00000538828 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
CLTCL1-205ENST00000538828 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
CLTCL1-205ENST00000538828 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
CLTCL1-205ENST00000538828 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
CLTCL1-205ENST00000538828 NLRP13Q86W25 1043 aa17.38■□□□□ 0.37
CLTCL1-205ENST00000538828 USP19O94966 1318 aa17.38■□□□□ 0.37
CLTCL1-205ENST00000538828 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
CLTCL1-205ENST00000538828 TESK2Q96S53 571 aa17.37■□□□□ 0.37
CLTCL1-205ENST00000538828 COL14A1Q05707 1796 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-205ENST00000538828 NINLQ9Y2I6 1382 aa17.37■□□□□ 0.37
CLTCL1-205ENST00000538828 FAM83GA6ND36 823 aa17.36■□□□□ 0.37
CLTCL1-205ENST00000538828 VPS72Q15906 364 aa17.36■□□□□ 0.37
CLTCL1-205ENST00000538828 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
CLTCL1-205ENST00000538828 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
CLTCL1-205ENST00000538828 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
CLTCL1-205ENST00000538828 CPDO75976 1380 aa17.35■□□□□ 0.37
CLTCL1-205ENST00000538828 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
CLTCL1-205ENST00000538828 PLCH1Q4KWH8 1693 aa17.35■□□□□ 0.37
CLTCL1-205ENST00000538828 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
CLTCL1-205ENST00000538828 RGS12O14924 1447 aa17.34■□□□□ 0.37
CLTCL1-205ENST00000538828 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
CLTCL1-205ENST00000538828 USP47Q96K76 1375 aa17.33■□□□□ 0.36
CLTCL1-205ENST00000538828 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
CLTCL1-205ENST00000538828 NRAPQ86VF7 1730 aa17.31■□□□□ 0.36
CLTCL1-205ENST00000538828 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
CLTCL1-205ENST00000538828 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 GCP02774 474 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 SLIT3O75094 1523 aa17.3■□□□□ 0.36
CLTCL1-205ENST00000538828 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 GLI3P10071 1580 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 TMF1P82094 1093 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
CLTCL1-205ENST00000538828 NLRP6P59044 892 aa17.28■□□□□ 0.36
CLTCL1-205ENST00000538828 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
CLTCL1-205ENST00000538828 PIK3C2AO00443 1686 aa17.27■□□□□ 0.36
CLTCL1-205ENST00000538828 USP54Q70EL1 1684 aa17.27■□□□□ 0.36
CLTCL1-205ENST00000538828 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.36
CLTCL1-205ENST00000538828 EDC4Q6P2E9 1401 aaKnown RBP17.27■□□□□ 0.35
CLTCL1-205ENST00000538828 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLTCL1-205ENST00000538828 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
CLTCL1-205ENST00000538828 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
CLTCL1-205ENST00000538828 LMO7Q8WWI1 1683 aa17.25■□□□□ 0.35
CLTCL1-205ENST00000538828 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
CLTCL1-205ENST00000538828 SPATA31A5Q5VU36 1347 aa17.24■□□□□ 0.35
CLTCL1-205ENST00000538828 SPATA31A7Q8IWB4 1347 aa17.24■□□□□ 0.35
CLTCL1-205ENST00000538828 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
CLTCL1-205ENST00000538828 ABCC6O95255 1503 aa17.23■□□□□ 0.35
CLTCL1-205ENST00000538828 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
CLTCL1-205ENST00000538828 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
CLTCL1-205ENST00000538828 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
CLTCL1-205ENST00000538828 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
CLTCL1-205ENST00000538828 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
CLTCL1-205ENST00000538828 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
CLTCL1-205ENST00000538828 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.34
CLTCL1-205ENST00000538828 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
CLTCL1-205ENST00000538828 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
CLTCL1-205ENST00000538828 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
CLTCL1-205ENST00000538828 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
CLTCL1-205ENST00000538828 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
CLTCL1-205ENST00000538828 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLTCL1-205ENST00000538828 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
CLTCL1-205ENST00000538828 COL18A1P39060 1754 aa17.18■□□□□ 0.34
CLTCL1-205ENST00000538828 NFAT5O94916 1531 aa17.18■□□□□ 0.34
CLTCL1-205ENST00000538828 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
CLTCL1-205ENST00000538828 THSD7AQ9UPZ6 1657 aa17.17■□□□□ 0.34
CLTCL1-205ENST00000538828 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
CLTCL1-205ENST00000538828 EVA1CP58658 441 aa17.17■□□□□ 0.34
CLTCL1-205ENST00000538828 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
CLTCL1-205ENST00000538828 EP400Q96L91 3159 aa17.16■□□□□ 0.34
CLTCL1-205ENST00000538828 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
CLTCL1-205ENST00000538828 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
CLTCL1-205ENST00000538828 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
CLTCL1-205ENST00000538828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLTCL1-205ENST00000538828 CRB1P82279 1406 aa17.14■□□□□ 0.33
CLTCL1-205ENST00000538828 NME9Q86XW9 330 aa17.14■□□□□ 0.33
CLTCL1-205ENST00000538828 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
CLTCL1-205ENST00000538828 STRN4Q9NRL3 753 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms