RNA–Protein interactions for RNA: ENST00000538594.5

AP003108.2-205, humanhuman

TSL 4

Gene AP003108.2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-205ENST00000538594 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
AP003108.2-205ENST00000538594 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.49
AP003108.2-205ENST00000538594 NWD2Q9ULI1 1742 aa11.95□□□□□ -0.5
AP003108.2-205ENST00000538594 CABLES1Q8TDN4 633 aa11.95□□□□□ -0.5
AP003108.2-205ENST00000538594 PHRF1Q9P1Y6 1649 aaKnown RBP11.95□□□□□ -0.5
AP003108.2-205ENST00000538594 ACEP12821 1306 aa11.94□□□□□ -0.5
AP003108.2-205ENST00000538594 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
AP003108.2-205ENST00000538594 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
AP003108.2-205ENST00000538594 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
AP003108.2-205ENST00000538594 ZBTB7CA1YPR0 619 aa11.93□□□□□ -0.5
AP003108.2-205ENST00000538594 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
AP003108.2-205ENST00000538594 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
AP003108.2-205ENST00000538594 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
AP003108.2-205ENST00000538594 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
AP003108.2-205ENST00000538594 AKAP12Q02952 1782 aa11.92□□□□□ -0.5
AP003108.2-205ENST00000538594 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
AP003108.2-205ENST00000538594 CDK12Q9NYV4 1490 aaPredicted RBP11.91□□□□□ -0.5
AP003108.2-205ENST00000538594 PRDM11Q9NQV5 511 aa11.91□□□□□ -0.5
AP003108.2-205ENST00000538594 POLR3AO14802 1390 aaPredicted RBP11.91□□□□□ -0.5
AP003108.2-205ENST00000538594 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
AP003108.2-205ENST00000538594 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
AP003108.2-205ENST00000538594 RGS12O14924 1447 aa11.89□□□□□ -0.51
AP003108.2-205ENST00000538594 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
AP003108.2-205ENST00000538594 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
AP003108.2-205ENST00000538594 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
AP003108.2-205ENST00000538594 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
AP003108.2-205ENST00000538594 NRKQ7Z2Y5 1582 aa11.88□□□□□ -0.51
AP003108.2-205ENST00000538594 NLRP13Q86W25 1043 aa11.88□□□□□ -0.51
AP003108.2-205ENST00000538594 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
AP003108.2-205ENST00000538594 MON2Q7Z3U7 1717 aa11.88□□□□□ -0.51
AP003108.2-205ENST00000538594 NRAPQ86VF7 1730 aa11.88□□□□□ -0.51
AP003108.2-205ENST00000538594 ATRNO75882 1429 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 USP6P35125 1406 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 EVA1CP58658 441 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 BTG4Q9NY30 223 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 USP47Q96K76 1375 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
AP003108.2-205ENST00000538594 SLIT2O94813 1529 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 SOX12O15370 315 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 NLRP6P59044 892 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 TERF2IPQ9NYB0 399 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 KIAA0232Q92628 1395 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 BCL9LQ86UU0 1499 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
AP003108.2-205ENST00000538594 MSH5O43196 834 aa11.85□□□□□ -0.51
AP003108.2-205ENST00000538594 TMF1P82094 1093 aa11.85□□□□□ -0.51
AP003108.2-205ENST00000538594 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
AP003108.2-205ENST00000538594 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
AP003108.2-205ENST00000538594 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
AP003108.2-205ENST00000538594 GLI3P10071 1580 aa11.84□□□□□ -0.51
AP003108.2-205ENST00000538594 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.52
AP003108.2-205ENST00000538594 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
AP003108.2-205ENST00000538594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.521e-7■■■■□ 25.5
AP003108.2-205ENST00000538594 TTC21AQ8NDW8 1320 aa11.83□□□□□ -0.52
AP003108.2-205ENST00000538594 NINLQ9Y2I6 1382 aa11.82□□□□□ -0.52
AP003108.2-205ENST00000538594 BRWD3Q6RI45 1802 aa11.82□□□□□ -0.52
AP003108.2-205ENST00000538594 FAM83GA6ND36 823 aa11.82□□□□□ -0.52
AP003108.2-205ENST00000538594 VPS72Q15906 364 aa11.82□□□□□ -0.52
AP003108.2-205ENST00000538594 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
AP003108.2-205ENST00000538594 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
AP003108.2-205ENST00000538594 LTN1O94822 1766 aa11.81□□□□□ -0.52
AP003108.2-205ENST00000538594 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
AP003108.2-205ENST00000538594 TTC21BQ7Z4L5 1316 aa11.8□□□□□ -0.52
AP003108.2-205ENST00000538594 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 EDC4Q6P2E9 1401 aaKnown RBP11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 GCP02774 474 aa11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 SLIT3O75094 1523 aa11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 USP19O94966 1318 aa11.79□□□□□ -0.52
AP003108.2-205ENST00000538594 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
AP003108.2-205ENST00000538594 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
AP003108.2-205ENST00000538594 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■■□□ 16.4
AP003108.2-205ENST00000538594 LMO7Q8WWI1 1683 aa11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 CPDO75976 1380 aa11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 RGPD5Q99666 1765 aa11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 SSH2Q76I76 1423 aa11.77□□□□□ -0.53
AP003108.2-205ENST00000538594 EP400Q96L91 3159 aa11.76□□□□□ -0.53
AP003108.2-205ENST00000538594 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
AP003108.2-205ENST00000538594 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
AP003108.2-205ENST00000538594 COG3Q96JB2 828 aa11.76□□□□□ -0.53
AP003108.2-205ENST00000538594 SLC12A5Q9H2X9 1139 aa11.76□□□□□ -0.53
AP003108.2-205ENST00000538594 RGPD1P0DJD0 1748 aa11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 SPATA31A7Q8IWB4 1347 aa11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
AP003108.2-205ENST00000538594 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
AP003108.2-205ENST00000538594 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
AP003108.2-205ENST00000538594 NME9Q86XW9 330 aa11.74□□□□□ -0.53
AP003108.2-205ENST00000538594 PUS7Q96PZ0 661 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms