RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KRT85P78386 507 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 NCBP3Q53F19 620 aaKnown RBP8.23□□□□□ -1.09
SORT1-209ENST00000538502 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 DYNC1I1O14576 645 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 TMCO3Q6UWJ1 677 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 TCEAL9Q9UHQ7 104 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 GGT6Q6P531 493 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 FGD6Q6ZV73 1430 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 FYCO1Q9BQS8 1478 aa8.22□□□□□ -1.09
SORT1-209ENST00000538502 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.09
SORT1-209ENST00000538502 RRBP1Q9P2E9 1410 aaKnown RBP8.21□□□□□ -1.09
SORT1-209ENST00000538502 NGDNQ8NEJ9 315 aaKnown RBP8.21□□□□□ -1.09
SORT1-209ENST00000538502 CFAP45Q9UL16 551 aa8.21□□□□□ -1.09
SORT1-209ENST00000538502 EID1Q9Y6B2 187 aa8.21□□□□□ -1.09
SORT1-209ENST00000538502 SERPINC1P01008 464 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 CCDC181Q5TID7 509 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 ZSCAN12O43309 604 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 TEFQ10587 303 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 STIM1Q13586 685 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 SART3Q15020 963 aaKnown RBP8.21□□□□□ -1.1
SORT1-209ENST00000538502 CCDC148Q8NFR7 591 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 PRIMPOLQ96LW4 560 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 G3V3G9 751 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.1
SORT1-209ENST00000538502 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
SORT1-209ENST00000538502 NEK4P51957 841 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 CEP57L1Q8IYX8 460 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 UBXN4Q92575 508 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 DHX29Q7Z478 1369 aaKnown RBP8.2□□□□□ -1.1
SORT1-209ENST00000538502 KIF3BO15066 747 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 SPC24Q8NBT2 197 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
SORT1-209ENST00000538502 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
SORT1-209ENST00000538502 UBTFL1P0CB47 393 aaPredicted RBP8.19□□□□□ -1.1
SORT1-209ENST00000538502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.13e-7■■□□□ 13.4
SORT1-209ENST00000538502 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 STK38Q15208 465 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 ZNF428Q96B54 188 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 NUP62CLQ9H1M0 184 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 POLA1P09884 1462 aaPredicted RBP8.19□□□□□ -1.1
SORT1-209ENST00000538502 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
SORT1-209ENST00000538502 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 TTC5Q8N0Z6 440 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 DYDC1Q8WWB3 177 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 PPP6R1Q9UPN7 881 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 TRAK1Q9UPV9 953 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 ERICH3Q5RHP9 1530 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 HNRNPMP52272 730 aaKnown RBP eCLIP8.19□□□□□ -1.17e-9■■■■□ 23.5
SORT1-209ENST00000538502 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
SORT1-209ENST00000538502 GOLGA6L10A0A0M3HER8 536 aa8.18□□□□□ -1.1
SORT1-209ENST00000538502 RBM33Q96EV2 1170 aaKnown RBP8.18□□□□□ -1.1
SORT1-209ENST00000538502 CCDC183Q5T5S1 534 aa8.18□□□□□ -1.1
SORT1-209ENST00000538502 CLASRPQ8N2M8 674 aaKnown RBP8.18□□□□□ -1.1
SORT1-209ENST00000538502 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
SORT1-209ENST00000538502 PTPN14Q15678 1187 aa8.18□□□□□ -1.1
SORT1-209ENST00000538502 SEPT7Q16181 437 aaKnown RBP8.18□□□□□ -1.1
SORT1-209ENST00000538502 EZRP15311 586 aaKnown RBP8.18□□□□□ -1.1
SORT1-209ENST00000538502 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
SORT1-209ENST00000538502 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
SORT1-209ENST00000538502 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCDC27Q2M243 656 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 ELL2O00472 640 aaPredicted RBP8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCDC30Q5VVM6 783 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 FIBPO43427 364 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCDC83Q8IWF9 413 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCDC43Q96MW1 224 aaKnown RBP8.17□□□□□ -1.1
SORT1-209ENST00000538502 PAXBP1Q9Y5B6 917 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CTAGE5O15320 804 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCT4P50991 539 aaKnown RBP8.17□□□□□ -1.1
SORT1-209ENST00000538502 SYCP1Q15431 976 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CDKL5O76039 1030 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 KRT32Q14532 448 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 CRACR2AQ9BSW2 395 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 GTPBP4Q9BZE4 634 aaKnown RBP8.17□□□□□ -1.1
SORT1-209ENST00000538502 AKNAQ7Z591 1439 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 PLCD4Q9BRC7 762 aa8.17□□□□□ -1.1
SORT1-209ENST00000538502 TUBB4AP04350 444 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 GSDMDP57764 484 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 FSD1Q9BTV5 496 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 GNAI2P04899 355 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 CASQ1P31415 396 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 MVPQ14764 893 aaKnown RBP8.16□□□□□ -1.1
SORT1-209ENST00000538502 NBPF1Q3BBV0 1214 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 TIGD1Q96MW7 591 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 CAVIN2O95810 425 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
SORT1-209ENST00000538502 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 SPATA32Q96LK8 384 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
SORT1-209ENST00000538502 HFM1A2PYH4 1435 aa8.16□□□□□ -1.1
SORT1-209ENST00000538502 SLC3A2P08195 630 aaKnown RBP8.15□□□□□ -1.1
SORT1-209ENST00000538502 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 808.8 ms