RNA–Protein interactions for RNA: ENST00000538453.5

NLRC5-213, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 2

Gene NLRC5, Length 4,121 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-213ENST00000538453 TRAK2O60296 914 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
NLRC5-213ENST00000538453 PKNOX2Q96KN3 472 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
NLRC5-213ENST00000538453 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
NLRC5-213ENST00000538453 GNL2Q13823 731 aaKnown RBP12.86□□□□□ -0.35
NLRC5-213ENST00000538453 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 IFIT2P09913 472 aaKnown RBP12.85□□□□□ -0.35
NLRC5-213ENST00000538453 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
NLRC5-213ENST00000538453 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
NLRC5-213ENST00000538453 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
NLRC5-213ENST00000538453 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
NLRC5-213ENST00000538453 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
NLRC5-213ENST00000538453 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
NLRC5-213ENST00000538453 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
NLRC5-213ENST00000538453 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
NLRC5-213ENST00000538453 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
NLRC5-213ENST00000538453 ABCC11Q96J66 1382 aa12.83□□□□□ -0.35
NLRC5-213ENST00000538453 MRE11P49959 708 aa12.83□□□□□ -0.36
NLRC5-213ENST00000538453 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
NLRC5-213ENST00000538453 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
NLRC5-213ENST00000538453 TRAPPC8Q9Y2L5 1435 aa12.83□□□□□ -0.36
NLRC5-213ENST00000538453 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
NLRC5-213ENST00000538453 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
NLRC5-213ENST00000538453 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
NLRC5-213ENST00000538453 IGHDP01880 384 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 MCM4P33991 863 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
NLRC5-213ENST00000538453 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 SPATA31E1Q6ZUB1 1445 aa12.82□□□□□ -0.36
NLRC5-213ENST00000538453 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
NLRC5-213ENST00000538453 GNAI2P04899 355 aa12.81□□□□□ -0.36
NLRC5-213ENST00000538453 RABEP1Q15276 862 aa12.81□□□□□ -0.36
NLRC5-213ENST00000538453 ASXL1Q8IXJ9 1541 aa12.81□□□□□ -0.36
NLRC5-213ENST00000538453 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
NLRC5-213ENST00000538453 NEK4P51957 841 aa12.8□□□□□ -0.36
NLRC5-213ENST00000538453 ERC2O15083 957 aa12.8□□□□□ -0.36
NLRC5-213ENST00000538453 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
NLRC5-213ENST00000538453 NSD2O96028 1365 aa12.8□□□□□ -0.36
NLRC5-213ENST00000538453 TRIM27P14373 513 aa12.79□□□□□ -0.36
NLRC5-213ENST00000538453 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
NLRC5-213ENST00000538453 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
NLRC5-213ENST00000538453 THEMISQ8N1K5 641 aaPredicted RBP12.79□□□□□ -0.36
NLRC5-213ENST00000538453 EIF4G3O43432 1585 aaKnown RBP12.79□□□□□ -0.36
NLRC5-213ENST00000538453 NME9Q86XW9 330 aa12.79□□□□□ -0.36
NLRC5-213ENST00000538453 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
NLRC5-213ENST00000538453 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
NLRC5-213ENST00000538453 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
NLRC5-213ENST00000538453 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
NLRC5-213ENST00000538453 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 H3BQV1 296 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
NLRC5-213ENST00000538453 SEC24BO95487 1268 aa12.77□□□□□ -0.36
NLRC5-213ENST00000538453 RNF20Q5VTR2 975 aa12.77□□□□□ -0.36
NLRC5-213ENST00000538453 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.36
NLRC5-213ENST00000538453 PANK2Q9BZ23 570 aa12.77□□□□□ -0.36
NLRC5-213ENST00000538453 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
NLRC5-213ENST00000538453 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 PLEKHH1Q9ULM0 1364 aa12.77□□□□□ -0.37
NLRC5-213ENST00000538453 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.37
NLRC5-213ENST00000538453 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.37
NLRC5-213ENST00000538453 ESPNB1AK53 854 aa12.76□□□□□ -0.37
NLRC5-213ENST00000538453 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 WASLO00401 505 aaPredicted RBP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
NLRC5-213ENST00000538453 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 MCM2P49736 904 aa12.76□□□□□ -0.37
NLRC5-213ENST00000538453 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
NLRC5-213ENST00000538453 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
NLRC5-213ENST00000538453 KDM6BO15054 1643 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 A2MP01023 1474 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
NLRC5-213ENST00000538453 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 MCM10Q7L590 875 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
NLRC5-213ENST00000538453 EIF2AK4Q9P2K8 1649 aaKnown RBP12.75□□□□□ -0.37
NLRC5-213ENST00000538453 FYB1O15117 783 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms