RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
KDM2B-206ENST00000538046 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 INSRP06213 1382 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 PDE3BQ13370 1112 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 BRINP3Q76B58 766 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 EVC2Q86UK5 1308 aa12.46□□□□□ -0.41
KDM2B-206ENST00000538046 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
KDM2B-206ENST00000538046 PANK3Q9H999 370 aa12.45□□□□□ -0.42
KDM2B-206ENST00000538046 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
KDM2B-206ENST00000538046 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
KDM2B-206ENST00000538046 PMFBP1Q8TBY8 1022 aa12.44□□□□□ -0.42
KDM2B-206ENST00000538046 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
KDM2B-206ENST00000538046 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
KDM2B-206ENST00000538046 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
KDM2B-206ENST00000538046 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
KDM2B-206ENST00000538046 SBNO2Q9Y2G9 1366 aa12.42□□□□□ -0.42
KDM2B-206ENST00000538046 FOXO3O43524 673 aa12.42□□□□□ -0.42
KDM2B-206ENST00000538046 HSPA1LP34931 641 aa12.42□□□□□ -0.42
KDM2B-206ENST00000538046 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
KDM2B-206ENST00000538046 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
KDM2B-206ENST00000538046 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
KDM2B-206ENST00000538046 ATP7BP35670 1465 aa12.41□□□□□ -0.42
KDM2B-206ENST00000538046 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
KDM2B-206ENST00000538046 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
KDM2B-206ENST00000538046 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
KDM2B-206ENST00000538046 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
KDM2B-206ENST00000538046 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
KDM2B-206ENST00000538046 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
KDM2B-206ENST00000538046 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
KDM2B-206ENST00000538046 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
KDM2B-206ENST00000538046 PHLPP1O60346 1717 aa12.38□□□□□ -0.43
KDM2B-206ENST00000538046 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
KDM2B-206ENST00000538046 PSME1Q06323 249 aa12.38□□□□□ -0.43
KDM2B-206ENST00000538046 CABP1Q9NZU7 370 aa12.38□□□□□ -0.43
KDM2B-206ENST00000538046 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
KDM2B-206ENST00000538046 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
KDM2B-206ENST00000538046 KIF1AQ12756 1690 aa12.37□□□□□ -0.43
KDM2B-206ENST00000538046 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
KDM2B-206ENST00000538046 ACEP12821 1306 aa12.36□□□□□ -0.43
KDM2B-206ENST00000538046 RRP1P56182 461 aaKnown RBP12.36□□□□□ -0.43
KDM2B-206ENST00000538046 NHSL1Q5SYE7 1610 aa12.36□□□□□ -0.43
KDM2B-206ENST00000538046 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
KDM2B-206ENST00000538046 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
KDM2B-206ENST00000538046 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
KDM2B-206ENST00000538046 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
KDM2B-206ENST00000538046 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
KDM2B-206ENST00000538046 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
KDM2B-206ENST00000538046 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
KDM2B-206ENST00000538046 SLC12A5Q9H2X9 1139 aa12.34□□□□□ -0.43
KDM2B-206ENST00000538046 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
KDM2B-206ENST00000538046 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
KDM2B-206ENST00000538046 COL16A1Q07092 1604 aaPredicted RBP12.34□□□□□ -0.43
KDM2B-206ENST00000538046 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
KDM2B-206ENST00000538046 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
KDM2B-206ENST00000538046 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
KDM2B-206ENST00000538046 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
KDM2B-206ENST00000538046 PXDNQ92626 1479 aa12.32□□□□□ -0.44
KDM2B-206ENST00000538046 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
KDM2B-206ENST00000538046 PUS7Q96PZ0 661 aaKnown RBP12.32□□□□□ -0.44
KDM2B-206ENST00000538046 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
KDM2B-206ENST00000538046 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
KDM2B-206ENST00000538046 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
KDM2B-206ENST00000538046 JCADQ9P266 1359 aa12.3□□□□□ -0.44
KDM2B-206ENST00000538046 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
KDM2B-206ENST00000538046 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 MS4A1P11836 297 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 NUTM2GQ5VZR2 741 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
KDM2B-206ENST00000538046 USP6P35125 1406 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
KDM2B-206ENST00000538046 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
KDM2B-206ENST00000538046 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
KDM2B-206ENST00000538046 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
KDM2B-206ENST00000538046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
KDM2B-206ENST00000538046 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
KDM2B-206ENST00000538046 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
KDM2B-206ENST00000538046 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
KDM2B-206ENST00000538046 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
KDM2B-206ENST00000538046 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
KDM2B-206ENST00000538046 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.44
KDM2B-206ENST00000538046 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.44
KDM2B-206ENST00000538046 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
KDM2B-206ENST00000538046 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
KDM2B-206ENST00000538046 PNPLA6Q8IY17 1366 aa12.27□□□□□ -0.45
KDM2B-206ENST00000538046 MYOM1P52179 1685 aa12.27□□□□□ -0.45
KDM2B-206ENST00000538046 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
KDM2B-206ENST00000538046 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.45
KDM2B-206ENST00000538046 AKAP12Q02952 1782 aa12.27□□□□□ -0.45
KDM2B-206ENST00000538046 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.45
KDM2B-206ENST00000538046 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
KDM2B-206ENST00000538046 ANKRD36BQ8N2N9 1353 aa12.26□□□□□ -0.45
KDM2B-206ENST00000538046 NEFMP07197 916 aa12.26□□□□□ -0.45
KDM2B-206ENST00000538046 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
KDM2B-206ENST00000538046 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms