RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
SNHG1-206ENST00000537925 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNHG1-206ENST00000537925 TMF1P82094 1093 aa16.03■□□□□ 0.16
SNHG1-206ENST00000537925 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
SNHG1-206ENST00000537925 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
SNHG1-206ENST00000537925 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.15
SNHG1-206ENST00000537925 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.15
SNHG1-206ENST00000537925 USP6P35125 1406 aa16.02■□□□□ 0.15
SNHG1-206ENST00000537925 POTEAQ6S8J7 498 aa16.02■□□□□ 0.15
SNHG1-206ENST00000537925 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.15
SNHG1-206ENST00000537925 MYOM1P52179 1685 aa16.02■□□□□ 0.15
SNHG1-206ENST00000537925 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
SNHG1-206ENST00000537925 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
SNHG1-206ENST00000537925 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
SNHG1-206ENST00000537925 HSPA5P11021 654 aaKnown RBP16■□□□□ 0.15
SNHG1-206ENST00000537925 PIK3C2AO00443 1686 aa16■□□□□ 0.15
SNHG1-206ENST00000537925 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
SNHG1-206ENST00000537925 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
SNHG1-206ENST00000537925 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
SNHG1-206ENST00000537925 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
SNHG1-206ENST00000537925 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
SNHG1-206ENST00000537925 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
SNHG1-206ENST00000537925 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
SNHG1-206ENST00000537925 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
SNHG1-206ENST00000537925 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
SNHG1-206ENST00000537925 USP54Q70EL1 1684 aa15.96■□□□□ 0.15
SNHG1-206ENST00000537925 KTN1Q86UP2 1357 aaKnown RBP15.96■□□□□ 0.15
SNHG1-206ENST00000537925 ADAMTS2O95450 1211 aa15.96■□□□□ 0.14
SNHG1-206ENST00000537925 CABLES1Q8TDN4 633 aa15.96■□□□□ 0.14
SNHG1-206ENST00000537925 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
SNHG1-206ENST00000537925 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
SNHG1-206ENST00000537925 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
SNHG1-206ENST00000537925 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
SNHG1-206ENST00000537925 ABTB2Q8N961 1025 aa15.94■□□□□ 0.14
SNHG1-206ENST00000537925 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
SNHG1-206ENST00000537925 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
SNHG1-206ENST00000537925 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
SNHG1-206ENST00000537925 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
SNHG1-206ENST00000537925 TTC21AQ8NDW8 1320 aa15.93■□□□□ 0.14
SNHG1-206ENST00000537925 USP19O94966 1318 aa15.92■□□□□ 0.14
SNHG1-206ENST00000537925 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
SNHG1-206ENST00000537925 ANKRD36BQ8N2N9 1353 aa15.92■□□□□ 0.14
SNHG1-206ENST00000537925 EDC4Q6P2E9 1401 aaKnown RBP15.92■□□□□ 0.14
SNHG1-206ENST00000537925 SLIT3O75094 1523 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 AFF2P51816 1311 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 PLEKHG5O94827 1062 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 HAP1P54257 671 aaPredicted RBP15.91■□□□□ 0.14
SNHG1-206ENST00000537925 NLRP13Q86W25 1043 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 FNBP4Q8N3X1 1017 aaPredicted RBP15.91■□□□□ 0.14
SNHG1-206ENST00000537925 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
SNHG1-206ENST00000537925 KIF20BQ96Q89 1820 aa15.9■□□□□ 0.14
SNHG1-206ENST00000537925 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
SNHG1-206ENST00000537925 SLIT2O94813 1529 aa15.89■□□□□ 0.13
SNHG1-206ENST00000537925 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
SNHG1-206ENST00000537925 NLRP6P59044 892 aa15.89■□□□□ 0.13
SNHG1-206ENST00000537925 ZNF772Q68DY9 489 aaPredicted RBP15.89■□□□□ 0.13
SNHG1-206ENST00000537925 UPF1Q92900 1129 aaKnown RBP eCLIP15.88■□□□□ 0.131e-26■□□□□ 8.6
SNHG1-206ENST00000537925 USP31Q70CQ4 1352 aa15.88■□□□□ 0.13
SNHG1-206ENST00000537925 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
SNHG1-206ENST00000537925 FAM83GA6ND36 823 aa15.86■□□□□ 0.13
SNHG1-206ENST00000537925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNHG1-206ENST00000537925 LTN1O94822 1766 aa15.86■□□□□ 0.13
SNHG1-206ENST00000537925 COL18A1P39060 1754 aa15.86■□□□□ 0.13
SNHG1-206ENST00000537925 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
SNHG1-206ENST00000537925 GCP02774 474 aa15.85■□□□□ 0.13
SNHG1-206ENST00000537925 USP21Q9UK80 565 aa15.85■□□□□ 0.13
SNHG1-206ENST00000537925 RGPD5Q99666 1765 aa15.85■□□□□ 0.13
SNHG1-206ENST00000537925 CPDO75976 1380 aa15.85■□□□□ 0.13
SNHG1-206ENST00000537925 KIAA0232Q92628 1395 aa15.85■□□□□ 0.13
SNHG1-206ENST00000537925 NME9Q86XW9 330 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 NFAT5O94916 1531 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
SNHG1-206ENST00000537925 ATRNO75882 1429 aa15.83■□□□□ 0.12
SNHG1-206ENST00000537925 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.12
SNHG1-206ENST00000537925 ZC3H6P61129 1189 aaKnown RBP15.83■□□□□ 0.12
SNHG1-206ENST00000537925 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
SNHG1-206ENST00000537925 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
SNHG1-206ENST00000537925 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.12
SNHG1-206ENST00000537925 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
SNHG1-206ENST00000537925 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
SNHG1-206ENST00000537925 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
SNHG1-206ENST00000537925 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
SNHG1-206ENST00000537925 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
SNHG1-206ENST00000537925 NSD3Q9BZ95 1437 aa15.81■□□□□ 0.12
SNHG1-206ENST00000537925 CAMTA1Q9Y6Y1 1673 aa15.8■□□□□ 0.12
SNHG1-206ENST00000537925 GLI3P10071 1580 aa15.79■□□□□ 0.12
SNHG1-206ENST00000537925 FYB1O15117 783 aa15.79■□□□□ 0.12
SNHG1-206ENST00000537925 CHRNA2Q15822 529 aa15.79■□□□□ 0.12
SNHG1-206ENST00000537925 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
SNHG1-206ENST00000537925 CCDC7Q96M83 1385 aa15.79■□□□□ 0.12
SNHG1-206ENST00000537925 RXRBP28702 533 aa15.78■□□□□ 0.12
SNHG1-206ENST00000537925 ABCC6O95255 1503 aa15.78■□□□□ 0.12
SNHG1-206ENST00000537925 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
SNHG1-206ENST00000537925 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
SNHG1-206ENST00000537925 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
SNHG1-206ENST00000537925 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms