RNA–Protein interactions for RNA: ENST00000537007.5

MRPL48-208, Transcript of mitochondrial ribosomal protein L48, human

TSL 3

Gene MRPL48, Length 287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-208	ENST00000537007	DISP3	Q9P2K9	1392 aa		5.74	□□□□□ -1.49
MRPL48-208	ENST00000537007	SIAH2	O43255	324 aa		5.73	□□□□□ -1.49
MRPL48-208	ENST00000537007	SLC24A1	O60721	1099 aa		5.73	□□□□□ -1.49
MRPL48-208	ENST00000537007	ADH1C	P00326	375 aa		5.73	□□□□□ -1.49
MRPL48-208	ENST00000537007	NLRP7	Q8WX94	980 aa		5.73	□□□□□ -1.49
MRPL48-208	ENST00000537007	SEMA3E	O15041	775 aa		5.72	□□□□□ -1.49
MRPL48-208	ENST00000537007	PURB	Q96QR8	312 aa	Known RBP	5.72	□□□□□ -1.49
MRPL48-208	ENST00000537007	DCAF1	Q9Y4B6	1507 aa		5.72	□□□□□ -1.49
MRPL48-208	ENST00000537007	CHD1	O14646	1710 aa		5.71	□□□□□ -1.49
MRPL48-208	ENST00000537007	CD46	P15529	392 aa		5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	VARS	P26640	1264 aa	Known RBP	5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	FOXK2	Q01167	660 aa		5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	NNT	Q13423	1086 aa		5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	RETREG3	Q86VR2	466 aa		5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	RSF1	Q96T23	1441 aa	Predicted RBP	5.71	□□□□□ -1.5
MRPL48-208	ENST00000537007	CCNYL3	P0C7X3	344 aa		5.7	□□□□□ -1.5
MRPL48-208	ENST00000537007	MS4A1	P11836	297 aa		5.7	□□□□□ -1.5
MRPL48-208	ENST00000537007	WDR4	P57081	412 aa	Known RBP	5.7	□□□□□ -1.5
MRPL48-208	ENST00000537007	NUTM1	Q86Y26	1132 aa		5.7	□□□□□ -1.5
MRPL48-208	ENST00000537007	RBM26	Q5T8P6	1007 aa	Known RBP	5.69	□□□□□ -1.5
MRPL48-208	ENST00000537007	MPND	Q8N594	471 aa		5.69	□□□□□ -1.5
MRPL48-208	ENST00000537007	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.69	□□□□□ -1.5
MRPL48-208	ENST00000537007	SMARCA4	P51532	1647 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	HOXA2	O43364	376 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	SH3BP2	P78314	561 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	GPAT2	Q6NUI2	795 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	FAM174A	Q8TBP5	190 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	ADAMTS8	Q9UP79	889 aa		5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	BAZ1B	Q9UIG0	1483 aa	Known RBP	5.68	□□□□□ -1.5
MRPL48-208	ENST00000537007	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	CEP164	Q9UPV0	1460 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	PPFIA3	O75145	1194 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	MARS	P56192	900 aa	Known RBP	5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	KANK3	Q6NY19	840 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	GPIHBP1	Q8IV16	184 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	SVOP	Q8N4V2	548 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	TLL2	Q9Y6L7	1015 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	ZNF608	Q9ULD9	1512 aa	Predicted RBP	5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	KIF13A	Q9H1H9	1805 aa		5.67	□□□□□ -1.5
MRPL48-208	ENST00000537007	SYNJ2	O15056	1496 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	C6orf229	H3BNL8	230 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	BMP2	P12643	396 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	TIMP2	P16035	220 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	PTPRN	Q16849	979 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	LINC01559	Q495D7	138 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	C6orf118	Q5T5N4	469 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	KRI1	Q8N9T8	703 aa	Known RBP	5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	UNC93B1	Q9H1C4	597 aa		5.66	□□□□□ -1.5
MRPL48-208	ENST00000537007	TESPA1	A2RU30	521 aa	Predicted RBP	5.65	□□□□□ -1.5
MRPL48-208	ENST00000537007	SOBP	A7XYQ1	873 aa		5.65	□□□□□ -1.5
MRPL48-208	ENST00000537007	PTCRA	Q6ISU1	281 aa	Predicted RBP	5.65	□□□□□ -1.5
MRPL48-208	ENST00000537007	SCARF2	Q96GP6	870 aa	Predicted RBP	5.65	□□□□□ -1.5
MRPL48-208	ENST00000537007	PHOX2B	Q99453	314 aa		5.65	□□□□□ -1.5
MRPL48-208	ENST00000537007	CADPS	Q9ULU8	1353 aa		5.65	□□□□□ -1.51
MRPL48-208	ENST00000537007	SPTLC1	O15269	473 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	ZIC2	O95409	532 aa	Predicted RBP	5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	IRS1	P35568	1242 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	ARID5B	Q14865	1188 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	ZNF511	Q8NB15	262 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	BAP1	Q92560	729 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	CNTNAP3B	Q96NU0	1288 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	CNTNAP3	Q9BZ76	1288 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	TSHZ2	Q9NRE2	1034 aa		5.64	□□□□□ -1.51
MRPL48-208	ENST00000537007	TULP1	O00294	542 aa	Predicted RBP	5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	GSK3A	P49840	483 aa		5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	KCNH2	Q12809	1159 aa		5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	NR5A1	Q13285	461 aa		5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	EVA1B	Q9NVM1	165 aa		5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	URB2	Q14146	1524 aa	Known RBP	5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	SPATA31D1	Q6ZQQ2	1576 aa		5.63	□□□□□ -1.51
MRPL48-208	ENST00000537007	FDX1	P10109	184 aa		5.62	□□□□□ -1.51
MRPL48-208	ENST00000537007	MDM2	Q00987	491 aa	Predicted RBP	5.62	□□□□□ -1.51
MRPL48-208	ENST00000537007	SYMPK	Q92797	1274 aa	Known RBP	5.62	□□□□□ -1.51
MRPL48-208	ENST00000537007	HLA-C	Q95604	372 aa		5.62	□□□□□ -1.51
MRPL48-208	ENST00000537007	ADGRL1	O94910	1474 aa		5.62	□□□□□ -1.51
MRPL48-208	ENST00000537007	SPDYE5	A6NIY4	337 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	GPR37	O15354	613 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	EIF4G3	O43432	1585 aa	Known RBP	5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	CLCN1	P35523	988 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	GUCA2A	Q02747	115 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	MAP3K10	Q02779	954 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	MAP2K5	Q13163	448 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	AGER	Q15109	404 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	LINC00528	Q8N1L1	170 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	TSEN34	Q9BSV6	310 aa	Known RBP	5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	FANCD2	Q9BXW9	1451 aa		5.61	□□□□□ -1.51
MRPL48-208	ENST00000537007	CTH	P32929	405 aa		5.6	□□□□□ -1.51
MRPL48-208	ENST00000537007	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.6	□□□□□ -1.51
MRPL48-208	ENST00000537007	ENAM	Q9NRM1	1142 aa		5.6	□□□□□ -1.51
MRPL48-208	ENST00000537007	KDM6B	O15054	1643 aa		5.59	□□□□□ -1.51
MRPL48-208	ENST00000537007	DESI1	Q6ICB0	168 aa		5.59	□□□□□ -1.51
MRPL48-208	ENST00000537007	GPCPD1	Q9NPB8	672 aa		5.59	□□□□□ -1.51
MRPL48-208	ENST00000537007	CLASP1	Q7Z460	1538 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	PHF20L1	A8MW92	1017 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	MSTN	O14793	375 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	MEIOB	Q8N635	442 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	ITPKC	Q96DU7	683 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	CDK15	Q96Q40	435 aa		5.58	□□□□□ -1.52
MRPL48-208	ENST00000537007	ZFAND3	Q9H8U3	227 aa		5.58	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms