RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 FAM98CQ17RN3 349 aaKnown RBP26.02■■□□□ 1.76
LTBR-206ENST00000536876 BTG4Q9NY30 223 aa26.02■■□□□ 1.76
LTBR-206ENST00000536876 MINK1Q8N4C8 1332 aaPredicted RBP26.01■■□□□ 1.75
LTBR-206ENST00000536876 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
LTBR-206ENST00000536876 SF3B2Q13435 895 aaKnown RBP26■■□□□ 1.75
LTBR-206ENST00000536876 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
LTBR-206ENST00000536876 GPRASP1Q5JY77 1395 aa25.97■■□□□ 1.75
LTBR-206ENST00000536876 SPATA31A5Q5VU36 1347 aa25.97■■□□□ 1.75
LTBR-206ENST00000536876 SPATA31A7Q8IWB4 1347 aa25.97■■□□□ 1.75
LTBR-206ENST00000536876 DISP2A7MBM2 1401 aa25.97■■□□□ 1.75
LTBR-206ENST00000536876 PSDA5PKW4 1024 aaPredicted RBP25.96■■□□□ 1.75
LTBR-206ENST00000536876 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
LTBR-206ENST00000536876 FAM182BQ5T319 152 aa25.95■■□□□ 1.74
LTBR-206ENST00000536876 NRKQ7Z2Y5 1582 aa25.95■■□□□ 1.74
LTBR-206ENST00000536876 A0A0G2JS52 829 aa25.94■■□□□ 1.74
LTBR-206ENST00000536876 MYT1Q01538 1121 aa25.94■■□□□ 1.74
LTBR-206ENST00000536876 BAG6P46379 1132 aa25.93■■□□□ 1.74
LTBR-206ENST00000536876 RREB1Q92766 1687 aa25.93■■□□□ 1.74
LTBR-206ENST00000536876 HRCP23327 699 aa25.92■■□□□ 1.74
LTBR-206ENST00000536876 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
LTBR-206ENST00000536876 KIAA0232Q92628 1395 aa25.9■■□□□ 1.74
LTBR-206ENST00000536876 EN1Q05925 392 aaPredicted RBP25.89■■□□□ 1.74
LTBR-206ENST00000536876 NUP188Q5SRE5 1749 aa25.88■■□□□ 1.73
LTBR-206ENST00000536876 KDM2AQ9Y2K7 1162 aa25.88■■□□□ 1.73
LTBR-206ENST00000536876 KIAA1210Q9ULL0 1709 aa25.88■■□□□ 1.73
LTBR-206ENST00000536876 DCAF11Q8TEB1 546 aa25.87■■□□□ 1.73
LTBR-206ENST00000536876 SPATA31A1Q5TZJ5 1347 aa25.87■■□□□ 1.73
LTBR-206ENST00000536876 NGDNQ8NEJ9 315 aaKnown RBP25.86■■□□□ 1.73
LTBR-206ENST00000536876 PRDM11Q9NQV5 511 aa25.86■■□□□ 1.73
LTBR-206ENST00000536876 POLR3AO14802 1390 aaPredicted RBP25.84■■□□□ 1.73
LTBR-206ENST00000536876 PAK3O75914 559 aaPredicted RBP25.83■■□□□ 1.73
LTBR-206ENST00000536876 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
LTBR-206ENST00000536876 CAMTA1Q9Y6Y1 1673 aa25.83■■□□□ 1.73
LTBR-206ENST00000536876 NUDT16Q96DE0 195 aaKnown RBP25.82■■□□□ 1.72
LTBR-206ENST00000536876 SSH2Q76I76 1423 aa25.8■■□□□ 1.72
LTBR-206ENST00000536876 R3HDM1Q15032 1099 aaKnown RBP25.8■■□□□ 1.72
LTBR-206ENST00000536876 PARP4Q9UKK3 1724 aaKnown RBP25.8■■□□□ 1.72
LTBR-206ENST00000536876 EZH2Q15910 746 aaKnown RBP25.79■■□□□ 1.72
LTBR-206ENST00000536876 NUTM2GQ5VZR2 741 aa25.77■■□□□ 1.72
LTBR-206ENST00000536876 CAMKK2Q96RR4 588 aa25.77■■□□□ 1.72
LTBR-206ENST00000536876 ZC3H6P61129 1189 aaKnown RBP25.76■■□□□ 1.71
LTBR-206ENST00000536876 PEAK1Q9H792 1746 aa25.76■■□□□ 1.71
LTBR-206ENST00000536876 WNK3Q9BYP7 1800 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 USP19O94966 1318 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 ACEP12821 1306 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 TRIM37O94972 964 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 STAC3Q96MF2 364 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 STRN4Q9NRL3 753 aa25.75■■□□□ 1.71
LTBR-206ENST00000536876 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
LTBR-206ENST00000536876 CPDO75976 1380 aa25.73■■□□□ 1.71
LTBR-206ENST00000536876 SBF2Q86WG5 1849 aa25.72■■□□□ 1.71
LTBR-206ENST00000536876 LRRC37A3O60309 1634 aa25.72■■□□□ 1.71
LTBR-206ENST00000536876 PARD3Q8TEW0 1356 aa25.71■■□□□ 1.71
LTBR-206ENST00000536876 FAM196AQ6ZSG2 479 aa25.71■■□□□ 1.71
LTBR-206ENST00000536876 BARGINQ6ZT62 677 aa25.71■■□□□ 1.71
LTBR-206ENST00000536876 COL5A2P05997 1499 aaPredicted RBP25.71■■□□□ 1.71
LTBR-206ENST00000536876 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
LTBR-206ENST00000536876 NBPF8Q3BBV2 869 aa25.7■■□□□ 1.7
LTBR-206ENST00000536876 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
LTBR-206ENST00000536876 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
LTBR-206ENST00000536876 LARP1Q6PKG0 1096 aaKnown RBP25.69■■□□□ 1.7
LTBR-206ENST00000536876 USP35Q9P2H5 1018 aa25.69■■□□□ 1.7
LTBR-206ENST00000536876 COL18A1P39060 1754 aa25.69■■□□□ 1.7
LTBR-206ENST00000536876 PIK3C2AO00443 1686 aa25.68■■□□□ 1.7
LTBR-206ENST00000536876 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
LTBR-206ENST00000536876 SLIT3O75094 1523 aa25.68■■□□□ 1.7
LTBR-206ENST00000536876 PPIP5K1Q6PFW1 1433 aa25.66■■□□□ 1.7
LTBR-206ENST00000536876 APBA3O96018 575 aa25.65■■□□□ 1.7
LTBR-206ENST00000536876 NBPF1Q3BBV0 1214 aa25.64■■□□□ 1.7
LTBR-206ENST00000536876 TCP11L2Q8N4U5 519 aa25.62■■□□□ 1.69
LTBR-206ENST00000536876 ABTB2Q8N961 1025 aa25.62■■□□□ 1.69
LTBR-206ENST00000536876 CASZ1Q86V15 1759 aa25.61■■□□□ 1.69
LTBR-206ENST00000536876 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
LTBR-206ENST00000536876 AKAP12Q02952 1782 aa25.59■■□□□ 1.69
LTBR-206ENST00000536876 EVA1CP58658 441 aa25.59■■□□□ 1.69
LTBR-206ENST00000536876 USP6P35125 1406 aa25.59■■□□□ 1.69
LTBR-206ENST00000536876 CRB1P82279 1406 aa25.58■■□□□ 1.69
LTBR-206ENST00000536876 GCP02774 474 aa25.58■■□□□ 1.69
LTBR-206ENST00000536876 PDE3BQ13370 1112 aa25.58■■□□□ 1.69
LTBR-206ENST00000536876 CABP2Q9NPB3 220 aa25.56■■□□□ 1.68
LTBR-206ENST00000536876 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
LTBR-206ENST00000536876 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
LTBR-206ENST00000536876 CENPJQ9HC77 1338 aaPredicted RBP25.55■■□□□ 1.68
LTBR-206ENST00000536876 OVOS2A0A0G2JMS6 1433 aa25.54■■□□□ 1.68
LTBR-206ENST00000536876 OVOS2A0A0J9YW53 1432 aa25.54■■□□□ 1.68
LTBR-206ENST00000536876 OVOS2Q6IE36 1432 aa25.54■■□□□ 1.68
LTBR-206ENST00000536876 BRD4O60885 1362 aaPredicted RBP25.54■■□□□ 1.68
LTBR-206ENST00000536876 NLRP13Q86W25 1043 aa25.53■■□□□ 1.68
LTBR-206ENST00000536876 AATKQ6ZMQ8 1374 aa25.53■■□□□ 1.68
LTBR-206ENST00000536876 SRPK2P78362 688 aaKnown RBP25.52■■□□□ 1.68
LTBR-206ENST00000536876 NFAT5O94916 1531 aa25.48■■□□□ 1.67
LTBR-206ENST00000536876 CPSF1Q10570 1443 aaKnown RBP25.48■■□□□ 1.67
LTBR-206ENST00000536876 PTF1AQ7RTS3 328 aa25.48■■□□□ 1.67
LTBR-206ENST00000536876 ANO8Q9HCE9 1232 aaPredicted RBP25.47■■□□□ 1.67
LTBR-206ENST00000536876 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
LTBR-206ENST00000536876 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
LTBR-206ENST00000536876 MYOM1P52179 1685 aa25.46■■□□□ 1.67
LTBR-206ENST00000536876 NBPF14Q5TI25 921 aa25.45■■□□□ 1.66
LTBR-206ENST00000536876 USP54Q70EL1 1684 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms