RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
LGR5-202ENST00000536515 AAMPQ13685 434 aa16.76■□□□□ 0.27
LGR5-202ENST00000536515 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
LGR5-202ENST00000536515 GSE1Q14687 1217 aa16.75■□□□□ 0.27
LGR5-202ENST00000536515 NLRP1Q9C000 1473 aa16.75■□□□□ 0.27
LGR5-202ENST00000536515 IL27Q8NEV9 243 aa16.75■□□□□ 0.27
LGR5-202ENST00000536515 PDZRN3Q9UPQ7 1066 aa16.75■□□□□ 0.27
LGR5-202ENST00000536515 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
LGR5-202ENST00000536515 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
LGR5-202ENST00000536515 ABCC11Q96J66 1382 aa16.74■□□□□ 0.27
LGR5-202ENST00000536515 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
LGR5-202ENST00000536515 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
LGR5-202ENST00000536515 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
LGR5-202ENST00000536515 ADGRB2O60241 1585 aa16.73■□□□□ 0.27
LGR5-202ENST00000536515 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
LGR5-202ENST00000536515 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
LGR5-202ENST00000536515 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
LGR5-202ENST00000536515 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
LGR5-202ENST00000536515 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
LGR5-202ENST00000536515 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
LGR5-202ENST00000536515 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
LGR5-202ENST00000536515 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
LGR5-202ENST00000536515 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
LGR5-202ENST00000536515 PLEKHF1Q96S99 279 aa16.71■□□□□ 0.27
LGR5-202ENST00000536515 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.26
LGR5-202ENST00000536515 SMC4Q9NTJ3 1288 aa16.71■□□□□ 0.26
LGR5-202ENST00000536515 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.26
LGR5-202ENST00000536515 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 FYB1O15117 783 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 POGKQ9P215 609 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
LGR5-202ENST00000536515 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
LGR5-202ENST00000536515 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
LGR5-202ENST00000536515 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
LGR5-202ENST00000536515 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
LGR5-202ENST00000536515 BECN1Q14457 450 aa16.68■□□□□ 0.26
LGR5-202ENST00000536515 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
LGR5-202ENST00000536515 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
LGR5-202ENST00000536515 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
LGR5-202ENST00000536515 TRIM27P14373 513 aa16.67■□□□□ 0.26
LGR5-202ENST00000536515 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
LGR5-202ENST00000536515 RTN4Q9NQC3 1192 aaKnown RBP16.67■□□□□ 0.26
LGR5-202ENST00000536515 RIPK4P57078 832 aa16.65■□□□□ 0.26
LGR5-202ENST00000536515 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
LGR5-202ENST00000536515 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
LGR5-202ENST00000536515 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
LGR5-202ENST00000536515 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
LGR5-202ENST00000536515 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
LGR5-202ENST00000536515 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
LGR5-202ENST00000536515 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
LGR5-202ENST00000536515 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
LGR5-202ENST00000536515 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
LGR5-202ENST00000536515 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
LGR5-202ENST00000536515 NOB1Q9ULX3 412 aaKnown RBP16.63■□□□□ 0.25
LGR5-202ENST00000536515 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
LGR5-202ENST00000536515 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
LGR5-202ENST00000536515 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
LGR5-202ENST00000536515 IL16Q14005 1332 aa16.62■□□□□ 0.25
LGR5-202ENST00000536515 MED14O60244 1454 aa16.61■□□□□ 0.25
LGR5-202ENST00000536515 SLIT1O75093 1534 aa16.61■□□□□ 0.25
LGR5-202ENST00000536515 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
LGR5-202ENST00000536515 FBLN1P23142 703 aa16.61■□□□□ 0.25
LGR5-202ENST00000536515 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
LGR5-202ENST00000536515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■■□ 20.9
LGR5-202ENST00000536515 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
LGR5-202ENST00000536515 ARHGAP23Q9P227 1491 aa16.6■□□□□ 0.25
LGR5-202ENST00000536515 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
LGR5-202ENST00000536515 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
LGR5-202ENST00000536515 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
LGR5-202ENST00000536515 ALKQ9UM73 1620 aa16.58■□□□□ 0.25
LGR5-202ENST00000536515 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
LGR5-202ENST00000536515 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
LGR5-202ENST00000536515 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
LGR5-202ENST00000536515 RIMS2Q9UQ26 1411 aa16.57■□□□□ 0.24
LGR5-202ENST00000536515 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
LGR5-202ENST00000536515 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
LGR5-202ENST00000536515 KIF16BQ96L93 1317 aa16.57■□□□□ 0.24
LGR5-202ENST00000536515 FCHSD2O94868 740 aa16.56■□□□□ 0.24
LGR5-202ENST00000536515 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
LGR5-202ENST00000536515 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
LGR5-202ENST00000536515 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
LGR5-202ENST00000536515 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
LGR5-202ENST00000536515 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
LGR5-202ENST00000536515 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
LGR5-202ENST00000536515 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
LGR5-202ENST00000536515 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
LGR5-202ENST00000536515 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
LGR5-202ENST00000536515 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
LGR5-202ENST00000536515 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
LGR5-202ENST00000536515 HMOX1P09601 288 aa16.54■□□□□ 0.24
LGR5-202ENST00000536515 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
LGR5-202ENST00000536515 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
LGR5-202ENST00000536515 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
LGR5-202ENST00000536515 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
LGR5-202ENST00000536515 LMTK3Q96Q04 1460 aa16.53■□□□□ 0.24
LGR5-202ENST00000536515 FAM135BQ49AJ0 1406 aa16.52■□□□□ 0.24
LGR5-202ENST00000536515 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
LGR5-202ENST00000536515 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms