RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 LRRC7Q96NW7 1537 aa28.01■■■□□ 2.07
PDXDC1-205ENST00000535621 SENP3-EIF4A1A0A087X0R7 540 aa28.01■■■□□ 2.07
PDXDC1-205ENST00000535621 ZRANB1Q9UGI0 708 aa28.01■■■□□ 2.07
PDXDC1-205ENST00000535621 NME9Q86XW9 330 aa28■■■□□ 2.07
PDXDC1-205ENST00000535621 C19orf44Q9H6X5 657 aa28■■■□□ 2.07
PDXDC1-205ENST00000535621 USP6P35125 1406 aa27.99■■■□□ 2.07
PDXDC1-205ENST00000535621 MTHFSP49914 203 aa27.99■■■□□ 2.07
PDXDC1-205ENST00000535621 NGDNQ8NEJ9 315 aaKnown RBP27.98■■■□□ 2.07
PDXDC1-205ENST00000535621 ZNF692Q9BU19 519 aaPredicted RBP27.98■■■□□ 2.07
PDXDC1-205ENST00000535621 ORAI2Q96SN7 254 aa27.97■■■□□ 2.07
PDXDC1-205ENST00000535621 ESCO1Q5FWF5 840 aa27.96■■■□□ 2.07
PDXDC1-205ENST00000535621 PHF8Q9UPP1 1060 aa27.95■■■□□ 2.06
PDXDC1-205ENST00000535621 DMRT2Q9Y5R5 561 aa27.95■■■□□ 2.06
PDXDC1-205ENST00000535621 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
PDXDC1-205ENST00000535621 TTC21BQ7Z4L5 1316 aa27.94■■■□□ 2.06
PDXDC1-205ENST00000535621 SSH2Q76I76 1423 aa27.93■■■□□ 2.06
PDXDC1-205ENST00000535621 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
PDXDC1-205ENST00000535621 FBLN1P23142 703 aa27.92■■■□□ 2.06
PDXDC1-205ENST00000535621 MST1RQ04912 1400 aa27.92■■■□□ 2.06
PDXDC1-205ENST00000535621 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
PDXDC1-205ENST00000535621 ATF3P18847 181 aa27.91■■■□□ 2.06
PDXDC1-205ENST00000535621 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
PDXDC1-205ENST00000535621 SMG6Q86US8 1419 aaKnown RBP27.9■■■□□ 2.06
PDXDC1-205ENST00000535621 MSH6P52701 1360 aa27.9■■■□□ 2.06
PDXDC1-205ENST00000535621 DCCP43146 1447 aa27.88■■■□□ 2.05
PDXDC1-205ENST00000535621 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
PDXDC1-205ENST00000535621 PIK3C2AO00443 1686 aa27.87■■■□□ 2.05
PDXDC1-205ENST00000535621 XPCQ01831 940 aaPredicted RBP27.86■■■□□ 2.05
PDXDC1-205ENST00000535621 MAP2P11137 1827 aaKnown RBP27.86■■■□□ 2.05
PDXDC1-205ENST00000535621 NUDCQ9Y266 331 aa27.85■■■□□ 2.05
PDXDC1-205ENST00000535621 FOXO3O43524 673 aa27.84■■■□□ 2.05
PDXDC1-205ENST00000535621 COL3A1P02461 1466 aaPredicted RBP27.83■■■□□ 2.05
PDXDC1-205ENST00000535621 CADPS2Q86UW7 1296 aa27.83■■■□□ 2.05
PDXDC1-205ENST00000535621 MARF1Q9Y4F3 1742 aaKnown RBP27.83■■■□□ 2.04
PDXDC1-205ENST00000535621 CCDC146Q8IYE0 955 aa27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 SUPT16HQ9Y5B9 1047 aaKnown RBP27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 PDE3BQ13370 1112 aa27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 NUTM2GQ5VZR2 741 aa27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 DDX17Q92841 729 aaKnown RBP27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 COG3Q96JB2 828 aa27.82■■■□□ 2.04
PDXDC1-205ENST00000535621 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
PDXDC1-205ENST00000535621 OVOS2A0A0J9YW53 1432 aa27.81■■■□□ 2.04
PDXDC1-205ENST00000535621 OVOS2Q6IE36 1432 aa27.81■■■□□ 2.04
PDXDC1-205ENST00000535621 KIF1AQ12756 1690 aa27.81■■■□□ 2.04
PDXDC1-205ENST00000535621 PAK3O75914 559 aaPredicted RBP27.81■■■□□ 2.04
PDXDC1-205ENST00000535621 LTBP4Q8N2S1 1624 aa27.8■■■□□ 2.04
PDXDC1-205ENST00000535621 PSME1Q06323 249 aa27.79■■■□□ 2.04
PDXDC1-205ENST00000535621 POLKQ9UBT6 870 aa27.79■■■□□ 2.04
PDXDC1-205ENST00000535621 AATKQ6ZMQ8 1374 aa27.79■■■□□ 2.04
PDXDC1-205ENST00000535621 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
PDXDC1-205ENST00000535621 SOX12O15370 315 aa27.77■■■□□ 2.04
PDXDC1-205ENST00000535621 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
PDXDC1-205ENST00000535621 TRPM3Q9HCF6 1732 aaPredicted RBP27.76■■■□□ 2.04
PDXDC1-205ENST00000535621 APAF1O14727 1248 aa27.76■■■□□ 2.03
PDXDC1-205ENST00000535621 RRS1Q15050 365 aaKnown RBP27.75■■■□□ 2.03
PDXDC1-205ENST00000535621 EMILIN1Q9Y6C2 1016 aa27.75■■■□□ 2.03
PDXDC1-205ENST00000535621 ZNF521Q96K83 1311 aa27.74■■■□□ 2.03
PDXDC1-205ENST00000535621 NEFLP07196 543 aa27.74■■■□□ 2.03
PDXDC1-205ENST00000535621 ABTB2Q8N961 1025 aa27.74■■■□□ 2.03
PDXDC1-205ENST00000535621 PPM1GO15355 546 aaPredicted RBP27.73■■■□□ 2.03
PDXDC1-205ENST00000535621 FKBP8Q14318 412 aa27.73■■■□□ 2.03
PDXDC1-205ENST00000535621 CDCA7LQ96GN5 454 aa27.73■■■□□ 2.03
PDXDC1-205ENST00000535621 NLRP6P59044 892 aa27.72■■■□□ 2.03
PDXDC1-205ENST00000535621 U2AF1L5P0DN76 240 aaPredicted RBP27.72■■■□□ 2.03
PDXDC1-205ENST00000535621 U2AF1Q01081 240 aaKnown RBP eCLIP27.72■■■□□ 2.03
PDXDC1-205ENST00000535621 RUNDC1Q96C34 613 aa27.72■■■□□ 2.03
PDXDC1-205ENST00000535621 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
PDXDC1-205ENST00000535621 USP31Q70CQ4 1352 aa27.71■■■□□ 2.03
PDXDC1-205ENST00000535621 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.03
PDXDC1-205ENST00000535621 BRINP3Q76B58 766 aa27.7■■■□□ 2.03
PDXDC1-205ENST00000535621 KRT28Q7Z3Y7 464 aa27.7■■■□□ 2.03
PDXDC1-205ENST00000535621 NGEFQ8N5V2 710 aa27.7■■■□□ 2.03
PDXDC1-205ENST00000535621 USP54Q70EL1 1684 aa27.7■■■□□ 2.03
PDXDC1-205ENST00000535621 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.02
PDXDC1-205ENST00000535621 PLEKHG5O94827 1062 aa27.69■■■□□ 2.02
PDXDC1-205ENST00000535621 IQSEC2Q5JU85 1478 aa27.68■■■□□ 2.02
PDXDC1-205ENST00000535621 PEAK1Q9H792 1746 aa27.68■■■□□ 2.02
PDXDC1-205ENST00000535621 U2SURPO15042 1029 aaKnown RBP27.67■■■□□ 2.02
PDXDC1-205ENST00000535621 LMOD2Q6P5Q4 547 aa27.65■■■□□ 2.02
PDXDC1-205ENST00000535621 ALS2Q96Q42 1657 aa27.65■■■□□ 2.02
PDXDC1-205ENST00000535621 TCP11L2Q8N4U5 519 aa27.63■■■□□ 2.01
PDXDC1-205ENST00000535621 PXDNQ92626 1479 aa27.63■■■□□ 2.01
PDXDC1-205ENST00000535621 GOLGA2Q08379 1002 aa27.63■■■□□ 2.01
PDXDC1-205ENST00000535621 PLEKHF1Q96S99 279 aa27.62■■■□□ 2.01
PDXDC1-205ENST00000535621 NPHP3Q7Z494 1330 aa27.61■■■□□ 2.01
PDXDC1-205ENST00000535621 RNF123Q5XPI4 1314 aa27.6■■■□□ 2.01
PDXDC1-205ENST00000535621 MAP3K19Q56UN5 1328 aa27.6■■■□□ 2.01
PDXDC1-205ENST00000535621 LTN1O94822 1766 aa27.59■■■□□ 2.01
PDXDC1-205ENST00000535621 IL13P35225 146 aa27.59■■■□□ 2.01
PDXDC1-205ENST00000535621 WWC1Q8IX03 1113 aa27.58■■■□□ 2.01
PDXDC1-205ENST00000535621 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
PDXDC1-205ENST00000535621 NCBP3Q53F19 620 aaKnown RBP27.58■■■□□ 2.01
PDXDC1-205ENST00000535621 SLFN5Q08AF3 891 aa27.57■■■□□ 2
PDXDC1-205ENST00000535621 DUSP27Q5VZP5 1158 aa27.57■■■□□ 2
PDXDC1-205ENST00000535621 RRP7AQ9Y3A4 280 aaKnown RBP27.57■■■□□ 2
PDXDC1-205ENST00000535621 NFAT5O94916 1531 aa27.57■■■□□ 2
PDXDC1-205ENST00000535621 FCHSD2O94868 740 aa27.56■■■□□ 2
PDXDC1-205ENST00000535621 IRX6P78412 446 aaPredicted RBP27.56■■■□□ 2
PDXDC1-205ENST00000535621 NEUROD2Q15784 382 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 TRMT2AQ8IZ69 625 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms