RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 MRGPRX2Q96LB1 330 aa13.62□□□□□ -0.23
LMO3-212ENST00000535535 WNT7BP56706 349 aa13.61□□□□□ -0.23
LMO3-212ENST00000535535 PTCRAQ6ISU1 281 aaPredicted RBP13.61□□□□□ -0.23
LMO3-212ENST00000535535 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
LMO3-212ENST00000535535 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
LMO3-212ENST00000535535 CHD1O14646 1710 aa13.61□□□□□ -0.23
LMO3-212ENST00000535535 CCNYL3P0C7X3 344 aa13.61□□□□□ -0.23
LMO3-212ENST00000535535 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
LMO3-212ENST00000535535 SPTLC1O15269 473 aa13.6□□□□□ -0.23
LMO3-212ENST00000535535 PTPRNQ16849 979 aa13.6□□□□□ -0.23
LMO3-212ENST00000535535 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
LMO3-212ENST00000535535 TTC24A2A3L6 582 aaPredicted RBP13.59□□□□□ -0.23
LMO3-212ENST00000535535 SPDYE5A6NIY4 337 aa13.59□□□□□ -0.23
LMO3-212ENST00000535535 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
LMO3-212ENST00000535535 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
LMO3-212ENST00000535535 DESI1Q6ICB0 168 aa13.58□□□□□ -0.24
LMO3-212ENST00000535535 SMPD1P17405 629 aa13.57□□□□□ -0.24
LMO3-212ENST00000535535 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
LMO3-212ENST00000535535 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
LMO3-212ENST00000535535 POTECB2RU33 542 aa13.56□□□□□ -0.24
LMO3-212ENST00000535535 CTC1Q2NKJ3 1217 aa13.55□□□□□ -0.24
LMO3-212ENST00000535535 J3QL48 77 aa13.54□□□□□ -0.24
LMO3-212ENST00000535535 SMCPP49901 116 aaPredicted RBP13.54□□□□□ -0.24
LMO3-212ENST00000535535 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
LMO3-212ENST00000535535 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
LMO3-212ENST00000535535 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
LMO3-212ENST00000535535 ARAP1Q96P48 1450 aa13.52□□□□□ -0.24
LMO3-212ENST00000535535 HRCP23327 699 aa13.52□□□□□ -0.25
LMO3-212ENST00000535535 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
LMO3-212ENST00000535535 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
LMO3-212ENST00000535535 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
LMO3-212ENST00000535535 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
LMO3-212ENST00000535535 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
LMO3-212ENST00000535535 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
LMO3-212ENST00000535535 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
LMO3-212ENST00000535535 PRPF38BQ5VTL8 546 aaKnown RBP13.51□□□□□ -0.25
LMO3-212ENST00000535535 AXIN1O15169 862 aa13.5□□□□□ -0.25
LMO3-212ENST00000535535 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
LMO3-212ENST00000535535 LIMD1Q9UGP4 676 aa13.5□□□□□ -0.25
LMO3-212ENST00000535535 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
LMO3-212ENST00000535535 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
LMO3-212ENST00000535535 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
LMO3-212ENST00000535535 SH3BP2P78314 561 aa13.48□□□□□ -0.25
LMO3-212ENST00000535535 LYPD8Q6UX82 237 aa13.48□□□□□ -0.25
LMO3-212ENST00000535535 SIAH2O43255 324 aa13.48□□□□□ -0.25
LMO3-212ENST00000535535 TUSC1Q2TAM9 212 aa13.48□□□□□ -0.25
LMO3-212ENST00000535535 ZNF775Q96BV0 537 aaPredicted RBP13.47□□□□□ -0.25
LMO3-212ENST00000535535 BCANQ96GW7 911 aa13.47□□□□□ -0.25
LMO3-212ENST00000535535 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
LMO3-212ENST00000535535 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.25
LMO3-212ENST00000535535 QPCTQ16769 361 aa13.45□□□□□ -0.26
LMO3-212ENST00000535535 HPS1Q92902 700 aa13.45□□□□□ -0.26
LMO3-212ENST00000535535 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMO3-212ENST00000535535 F12P00748 615 aaPredicted RBP13.44□□□□□ -0.26
LMO3-212ENST00000535535 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
LMO3-212ENST00000535535 ZNF511Q8NB15 262 aa13.43□□□□□ -0.26
LMO3-212ENST00000535535 BAP1Q92560 729 aa13.43□□□□□ -0.26
LMO3-212ENST00000535535 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
LMO3-212ENST00000535535 GMPR2Q9P2T1 348 aaKnown RBP13.42□□□□□ -0.26
LMO3-212ENST00000535535 LILRB3O75022 631 aa13.42□□□□□ -0.26
LMO3-212ENST00000535535 MAP10Q9P2G4 905 aa13.42□□□□□ -0.26
LMO3-212ENST00000535535 CLASP1Q7Z460 1538 aa13.4□□□□□ -0.26
LMO3-212ENST00000535535 CLK2P49760 499 aaKnown RBP13.4□□□□□ -0.26
LMO3-212ENST00000535535 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
LMO3-212ENST00000535535 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
LMO3-212ENST00000535535 CTHP32929 405 aa13.39□□□□□ -0.27
LMO3-212ENST00000535535 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
LMO3-212ENST00000535535 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
LMO3-212ENST00000535535 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
LMO3-212ENST00000535535 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
LMO3-212ENST00000535535 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
LMO3-212ENST00000535535 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
LMO3-212ENST00000535535 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
LMO3-212ENST00000535535 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
LMO3-212ENST00000535535 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
LMO3-212ENST00000535535 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
LMO3-212ENST00000535535 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
LMO3-212ENST00000535535 TSC1Q92574 1164 aa13.34□□□□□ -0.27
LMO3-212ENST00000535535 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
LMO3-212ENST00000535535 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
LMO3-212ENST00000535535 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
LMO3-212ENST00000535535 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
LMO3-212ENST00000535535 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
LMO3-212ENST00000535535 WASF2Q9Y6W5 498 aa13.33□□□□□ -0.28
LMO3-212ENST00000535535 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
LMO3-212ENST00000535535 MPNDQ8N594 471 aa13.32□□□□□ -0.28
LMO3-212ENST00000535535 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
LMO3-212ENST00000535535 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
LMO3-212ENST00000535535 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
LMO3-212ENST00000535535 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
LMO3-212ENST00000535535 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
LMO3-212ENST00000535535 SOGA1O94964 1423 aa13.28□□□□□ -0.28
LMO3-212ENST00000535535 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
LMO3-212ENST00000535535 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
LMO3-212ENST00000535535 FAM117AQ9C073 453 aa13.28□□□□□ -0.28
LMO3-212ENST00000535535 PLEKHG3A1L390 1219 aa13.27□□□□□ -0.29
LMO3-212ENST00000535535 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.29
LMO3-212ENST00000535535 C4orf48Q5BLP8 95 aa13.27□□□□□ -0.29
LMO3-212ENST00000535535 FAM174AQ8TBP5 190 aa13.27□□□□□ -0.29
LMO3-212ENST00000535535 SENP2Q9HC62 589 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms