RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 DZIP1LQ8IYY4 767 aaKnown RBP22.5■■□□□ 1.19
CTSB-232ENST00000534510 SEC24BO95487 1268 aa22.49■■□□□ 1.19
CTSB-232ENST00000534510 BECN1Q14457 450 aa22.49■■□□□ 1.19
CTSB-232ENST00000534510 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
CTSB-232ENST00000534510 IL16Q14005 1332 aa22.49■■□□□ 1.19
CTSB-232ENST00000534510 MINK1Q8N4C8 1332 aaPredicted RBP22.48■■□□□ 1.19
CTSB-232ENST00000534510 TSR2Q969E8 191 aaKnown RBP22.47■■□□□ 1.19
CTSB-232ENST00000534510 PRAM1Q96QH2 718 aa22.47■■□□□ 1.19
CTSB-232ENST00000534510 UPF2Q9HAU5 1272 aaKnown RBP22.47■■□□□ 1.19
CTSB-232ENST00000534510 POGKQ9P215 609 aa22.47■■□□□ 1.19
CTSB-232ENST00000534510 ALKQ9UM73 1620 aa22.47■■□□□ 1.19
CTSB-232ENST00000534510 FYB1O15117 783 aa22.47■■□□□ 1.19
CTSB-232ENST00000534510 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
CTSB-232ENST00000534510 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
CTSB-232ENST00000534510 TRIM35Q9UPQ4 493 aa22.46■■□□□ 1.19
CTSB-232ENST00000534510 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
CTSB-232ENST00000534510 CDC42BPGQ6DT37 1551 aa22.45■■□□□ 1.18
CTSB-232ENST00000534510 PNNQ9H307 717 aaKnown RBP22.45■■□□□ 1.18
CTSB-232ENST00000534510 ARHGEF40Q8TER5 1519 aa22.43■■□□□ 1.18
CTSB-232ENST00000534510 PNPLA6Q8IY17 1366 aa22.42■■□□□ 1.18
CTSB-232ENST00000534510 DIAPH1O60610 1272 aaKnown RBP22.42■■□□□ 1.18
CTSB-232ENST00000534510 FRAT2O75474 233 aaPredicted RBP22.42■■□□□ 1.18
CTSB-232ENST00000534510 TBC1D32Q96NH3 1257 aa22.41■■□□□ 1.18
CTSB-232ENST00000534510 DDX19BQ9UMR2 479 aa22.41■■□□□ 1.18
CTSB-232ENST00000534510 SSH1Q8WYL5 1049 aa22.41■■□□□ 1.18
CTSB-232ENST00000534510 REREQ9P2R6 1566 aa22.4■■□□□ 1.18
CTSB-232ENST00000534510 TRIM27P14373 513 aa22.4■■□□□ 1.18
CTSB-232ENST00000534510 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
CTSB-232ENST00000534510 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
CTSB-232ENST00000534510 DLC1Q96QB1 1528 aa22.4■■□□□ 1.18
CTSB-232ENST00000534510 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
CTSB-232ENST00000534510 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.18
CTSB-232ENST00000534510 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.18
CTSB-232ENST00000534510 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.18
CTSB-232ENST00000534510 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.18
CTSB-232ENST00000534510 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.18
CTSB-232ENST00000534510 RIPK4P57078 832 aa22.39■■□□□ 1.17
CTSB-232ENST00000534510 LRRC7Q96NW7 1537 aa22.39■■□□□ 1.17
CTSB-232ENST00000534510 CDK19Q9BWU1 502 aa22.39■■□□□ 1.17
CTSB-232ENST00000534510 KIF16BQ96L93 1317 aa22.38■■□□□ 1.17
CTSB-232ENST00000534510 ATP7BP35670 1465 aa22.37■■□□□ 1.17
CTSB-232ENST00000534510 ITPRIPQ8IWB1 547 aa22.37■■□□□ 1.17
CTSB-232ENST00000534510 IL27Q8NEV9 243 aa22.37■■□□□ 1.17
CTSB-232ENST00000534510 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
CTSB-232ENST00000534510 NOB1Q9ULX3 412 aaKnown RBP22.35■■□□□ 1.17
CTSB-232ENST00000534510 AGLP35573 1532 aa22.35■■□□□ 1.17
CTSB-232ENST00000534510 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
CTSB-232ENST00000534510 FCHSD2O94868 740 aa22.34■■□□□ 1.17
CTSB-232ENST00000534510 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
CTSB-232ENST00000534510 CABP1Q9NZU7 370 aa22.34■■□□□ 1.17
CTSB-232ENST00000534510 FAM135BQ49AJ0 1406 aa22.34■■□□□ 1.17
CTSB-232ENST00000534510 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
CTSB-232ENST00000534510 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
CTSB-232ENST00000534510 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
CTSB-232ENST00000534510 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
CTSB-232ENST00000534510 SMC5Q8IY18 1101 aa22.31■■□□□ 1.16
CTSB-232ENST00000534510 TMEM57Q8N5G2 664 aa22.31■■□□□ 1.16
CTSB-232ENST00000534510 TSPOAP1O95153 1857 aa22.31■■□□□ 1.16
CTSB-232ENST00000534510 PPIP5K1Q6PFW1 1433 aa22.31■■□□□ 1.16
CTSB-232ENST00000534510 RSPH6AQ9H0K4 717 aa22.3■■□□□ 1.16
CTSB-232ENST00000534510 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
CTSB-232ENST00000534510 A2ML1A8K2U0 1454 aa22.29■■□□□ 1.16
CTSB-232ENST00000534510 ZNF428Q96B54 188 aa22.29■■□□□ 1.16
CTSB-232ENST00000534510 TBC1D2Q9BYX2 928 aa22.29■■□□□ 1.16
CTSB-232ENST00000534510 SLKQ9H2G2 1235 aaPredicted RBP22.29■■□□□ 1.16
CTSB-232ENST00000534510 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
CTSB-232ENST00000534510 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
CTSB-232ENST00000534510 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
CTSB-232ENST00000534510 PRKAR2BP31323 418 aa22.28■■□□□ 1.16
CTSB-232ENST00000534510 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
CTSB-232ENST00000534510 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
CTSB-232ENST00000534510 BRPF1P55201 1214 aaPredicted RBP22.27■■□□□ 1.15
CTSB-232ENST00000534510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.26■■□□□ 1.15
CTSB-232ENST00000534510 CALD1Q05682 793 aaKnown RBP22.25■■□□□ 1.15
CTSB-232ENST00000534510 C22orf23Q9BZE7 217 aa22.25■■□□□ 1.15
CTSB-232ENST00000534510 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
CTSB-232ENST00000534510 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
CTSB-232ENST00000534510 BRPF3Q9ULD4 1205 aa22.25■■□□□ 1.15
CTSB-232ENST00000534510 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
CTSB-232ENST00000534510 MFAP1P55081 439 aaKnown RBP22.23■■□□□ 1.15
CTSB-232ENST00000534510 CPSF1Q10570 1443 aaKnown RBP22.22■■□□□ 1.15
CTSB-232ENST00000534510 NUCB1Q02818 461 aa22.22■■□□□ 1.15
CTSB-232ENST00000534510 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
CTSB-232ENST00000534510 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
CTSB-232ENST00000534510 PTCH1Q13635 1447 aa22.21■■□□□ 1.15
CTSB-232ENST00000534510 NRXN3Q9Y4C0 1643 aa22.21■■□□□ 1.15
CTSB-232ENST00000534510 KNDC1Q76NI1 1749 aa22.2■■□□□ 1.14
CTSB-232ENST00000534510 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
CTSB-232ENST00000534510 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
CTSB-232ENST00000534510 GNAI1P63096 354 aa22.19■■□□□ 1.14
CTSB-232ENST00000534510 ARHGAP45Q92619 1136 aa22.19■■□□□ 1.14
CTSB-232ENST00000534510 RTN4Q9NQC3 1192 aaKnown RBP22.19■■□□□ 1.14
CTSB-232ENST00000534510 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
CTSB-232ENST00000534510 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
CTSB-232ENST00000534510 HMOX1P09601 288 aa22.18■■□□□ 1.14
CTSB-232ENST00000534510 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
CTSB-232ENST00000534510 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
CTSB-232ENST00000534510 FBLN1P23142 703 aa22.17■■□□□ 1.14
CTSB-232ENST00000534510 IL13P35225 146 aa22.17■■□□□ 1.14
CTSB-232ENST00000534510 MRPL50Q8N5N7 158 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms