RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 KCNQ2O43526 872 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 PIK3C2GO75747 1445 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 APBA3O96018 575 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 PSME1Q06323 249 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
KNL1-212ENST00000534204 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 SPON1Q9HCB6 807 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
KNL1-212ENST00000534204 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.56
KNL1-212ENST00000534204 FAM196AQ6ZSG2 479 aa18.52■□□□□ 0.56
KNL1-212ENST00000534204 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
KNL1-212ENST00000534204 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
KNL1-212ENST00000534204 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
KNL1-212ENST00000534204 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
KNL1-212ENST00000534204 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
KNL1-212ENST00000534204 PARP4Q9UKK3 1724 aaKnown RBP18.48■□□□□ 0.55
KNL1-212ENST00000534204 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
KNL1-212ENST00000534204 ITGAEP38570 1179 aa18.46■□□□□ 0.55
KNL1-212ENST00000534204 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
KNL1-212ENST00000534204 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.55
KNL1-212ENST00000534204 PDGFDQ9GZP0 370 aaPredicted RBP18.45■□□□□ 0.54
KNL1-212ENST00000534204 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
KNL1-212ENST00000534204 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
KNL1-212ENST00000534204 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
KNL1-212ENST00000534204 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
KNL1-212ENST00000534204 CEP350Q5VT06 3117 aa18.43■□□□□ 0.54
KNL1-212ENST00000534204 PTGER2P43116 358 aa18.42■□□□□ 0.54
KNL1-212ENST00000534204 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
KNL1-212ENST00000534204 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
KNL1-212ENST00000534204 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
KNL1-212ENST00000534204 PRR36Q9H6K5 1346 aa18.41■□□□□ 0.54
KNL1-212ENST00000534204 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
KNL1-212ENST00000534204 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
KNL1-212ENST00000534204 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
KNL1-212ENST00000534204 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
KNL1-212ENST00000534204 LRRC37A3O60309 1634 aa18.39■□□□□ 0.53
KNL1-212ENST00000534204 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
KNL1-212ENST00000534204 TULP4Q9NRJ4 1543 aa18.38■□□□□ 0.53
KNL1-212ENST00000534204 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
KNL1-212ENST00000534204 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
KNL1-212ENST00000534204 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
KNL1-212ENST00000534204 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
KNL1-212ENST00000534204 ADGRB1O14514 1584 aa18.34■□□□□ 0.53
KNL1-212ENST00000534204 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
KNL1-212ENST00000534204 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
KNL1-212ENST00000534204 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
KNL1-212ENST00000534204 GPRASP1Q5JY77 1395 aa18.33■□□□□ 0.53
KNL1-212ENST00000534204 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
KNL1-212ENST00000534204 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.523e-7■■□□□ 13.3
KNL1-212ENST00000534204 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.52
KNL1-212ENST00000534204 SGIP1Q9BQI5 828 aa18.33■□□□□ 0.52
KNL1-212ENST00000534204 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
KNL1-212ENST00000534204 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
KNL1-212ENST00000534204 ZBTB7AO95365 584 aa18.32■□□□□ 0.52
KNL1-212ENST00000534204 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
KNL1-212ENST00000534204 PROM2Q8N271 834 aa18.32■□□□□ 0.52
KNL1-212ENST00000534204 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
KNL1-212ENST00000534204 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
KNL1-212ENST00000534204 ATP7BP35670 1465 aa18.32■□□□□ 0.52
KNL1-212ENST00000534204 PLSCR1O15162 318 aa18.31■□□□□ 0.52
KNL1-212ENST00000534204 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
KNL1-212ENST00000534204 LARP1Q6PKG0 1096 aaKnown RBP18.3■□□□□ 0.52
KNL1-212ENST00000534204 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
KNL1-212ENST00000534204 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
KNL1-212ENST00000534204 CFAP70Q5T0N1 1121 aa18.28■□□□□ 0.52
KNL1-212ENST00000534204 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
KNL1-212ENST00000534204 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
KNL1-212ENST00000534204 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
KNL1-212ENST00000534204 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
KNL1-212ENST00000534204 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
KNL1-212ENST00000534204 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
KNL1-212ENST00000534204 CPDO75976 1380 aa18.25■□□□□ 0.51
KNL1-212ENST00000534204 ARHGEF28Q8N1W1 1705 aaKnown RBP18.23■□□□□ 0.51
KNL1-212ENST00000534204 GOLGB1Q14789 3259 aaKnown RBP18.23■□□□□ 0.51
KNL1-212ENST00000534204 COL18A1P39060 1754 aa18.22■□□□□ 0.51
KNL1-212ENST00000534204 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
KNL1-212ENST00000534204 GIGYF1O75420 1035 aaPredicted RBP18.22■□□□□ 0.51
KNL1-212ENST00000534204 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
KNL1-212ENST00000534204 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
KNL1-212ENST00000534204 BCL9O00512 1426 aa18.22■□□□□ 0.51
KNL1-212ENST00000534204 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
KNL1-212ENST00000534204 BCL11BQ9C0K0 894 aaPredicted RBP18.2■□□□□ 0.5
KNL1-212ENST00000534204 CRB1P82279 1406 aa18.2■□□□□ 0.5
KNL1-212ENST00000534204 USP19O94966 1318 aa18.2■□□□□ 0.5
KNL1-212ENST00000534204 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
KNL1-212ENST00000534204 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
KNL1-212ENST00000534204 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
KNL1-212ENST00000534204 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
KNL1-212ENST00000534204 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
KNL1-212ENST00000534204 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
KNL1-212ENST00000534204 QSER1Q2KHR3 1735 aa18.18■□□□□ 0.5
KNL1-212ENST00000534204 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
KNL1-212ENST00000534204 EVA1CP58658 441 aa18.18■□□□□ 0.5
KNL1-212ENST00000534204 SLC15A2Q16348 729 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms