RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 NEUROD1Q13562 356 aa15.58■□□□□ 0.08
SDHD-208ENST00000534010 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
SDHD-208ENST00000534010 AKAP12Q02952 1782 aa15.57■□□□□ 0.08
SDHD-208ENST00000534010 ACEP12821 1306 aa15.57■□□□□ 0.08
SDHD-208ENST00000534010 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
SDHD-208ENST00000534010 ROCK2O75116 1388 aaKnown RBP15.57■□□□□ 0.08
SDHD-208ENST00000534010 CABLES1Q8TDN4 633 aa15.56■□□□□ 0.08
SDHD-208ENST00000534010 NRKQ7Z2Y5 1582 aa15.55■□□□□ 0.08
SDHD-208ENST00000534010 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
SDHD-208ENST00000534010 UNC5CLQ8IV45 518 aa15.55■□□□□ 0.08
SDHD-208ENST00000534010 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■□□□□ 9.2
SDHD-208ENST00000534010 USP19O94966 1318 aa15.54■□□□□ 0.08
SDHD-208ENST00000534010 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
SDHD-208ENST00000534010 LMO7Q8WWI1 1683 aa15.54■□□□□ 0.08
SDHD-208ENST00000534010 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
SDHD-208ENST00000534010 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
SDHD-208ENST00000534010 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
SDHD-208ENST00000534010 GJD4Q96KN9 370 aaPredicted RBP15.53■□□□□ 0.08
SDHD-208ENST00000534010 USP54Q70EL1 1684 aa15.53■□□□□ 0.08
SDHD-208ENST00000534010 USP6P35125 1406 aa15.52■□□□□ 0.08
SDHD-208ENST00000534010 CPSF1Q10570 1443 aaKnown RBP15.52■□□□□ 0.08
SDHD-208ENST00000534010 PIK3C2AO00443 1686 aa15.52■□□□□ 0.08
SDHD-208ENST00000534010 VPS72Q15906 364 aa15.52■□□□□ 0.08
SDHD-208ENST00000534010 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
SDHD-208ENST00000534010 MON2Q7Z3U7 1717 aa15.51■□□□□ 0.07
SDHD-208ENST00000534010 TONSLQ96HA7 1378 aa15.51■□□□□ 0.07
SDHD-208ENST00000534010 SLIT3O75094 1523 aa15.51■□□□□ 0.07
SDHD-208ENST00000534010 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
SDHD-208ENST00000534010 CPDO75976 1380 aa15.49■□□□□ 0.07
SDHD-208ENST00000534010 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
SDHD-208ENST00000534010 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
SDHD-208ENST00000534010 THSD7AQ9UPZ6 1657 aa15.49■□□□□ 0.07
SDHD-208ENST00000534010 SRPK2P78362 688 aaKnown RBP15.48■□□□□ 0.07
SDHD-208ENST00000534010 CABP1Q9NZU7 370 aa15.48■□□□□ 0.07
SDHD-208ENST00000534010 COL18A1P39060 1754 aa15.48■□□□□ 0.07
SDHD-208ENST00000534010 PUS7Q96PZ0 661 aaKnown RBP15.47■□□□□ 0.07
SDHD-208ENST00000534010 TESK2Q96S53 571 aa15.47■□□□□ 0.07
SDHD-208ENST00000534010 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
SDHD-208ENST00000534010 CARD11Q9BXL7 1154 aa15.46■□□□□ 0.07
SDHD-208ENST00000534010 KIAA0232Q92628 1395 aa15.46■□□□□ 0.07
SDHD-208ENST00000534010 SRCAPQ6ZRS2 3230 aa15.45■□□□□ 0.06
SDHD-208ENST00000534010 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
SDHD-208ENST00000534010 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
SDHD-208ENST00000534010 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
SDHD-208ENST00000534010 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
SDHD-208ENST00000534010 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
SDHD-208ENST00000534010 NFAT5O94916 1531 aa15.43■□□□□ 0.06
SDHD-208ENST00000534010 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
SDHD-208ENST00000534010 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
SDHD-208ENST00000534010 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
SDHD-208ENST00000534010 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
SDHD-208ENST00000534010 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
SDHD-208ENST00000534010 TTC21BQ7Z4L5 1316 aa15.41■□□□□ 0.06
SDHD-208ENST00000534010 USP31Q70CQ4 1352 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 ABCC6O95255 1503 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 GCP02774 474 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
SDHD-208ENST00000534010 SPATA31A1Q5TZJ5 1347 aa15.39■□□□□ 0.05
SDHD-208ENST00000534010 COL5A2P05997 1499 aaPredicted RBP15.39■□□□□ 0.05
SDHD-208ENST00000534010 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
SDHD-208ENST00000534010 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
SDHD-208ENST00000534010 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
SDHD-208ENST00000534010 ST20-MTHFSA0A0A6YYL1 179 aa15.37■□□□□ 0.05
SDHD-208ENST00000534010 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
SDHD-208ENST00000534010 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
SDHD-208ENST00000534010 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
SDHD-208ENST00000534010 WNK3Q9BYP7 1800 aa15.36■□□□□ 0.05
SDHD-208ENST00000534010 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
SDHD-208ENST00000534010 CHRNA2Q15822 529 aa15.36■□□□□ 0.05
SDHD-208ENST00000534010 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
SDHD-208ENST00000534010 EDC4Q6P2E9 1401 aaKnown RBP15.35■□□□□ 0.05
SDHD-208ENST00000534010 CCDC125Q86Z20 511 aa15.35■□□□□ 0.05
SDHD-208ENST00000534010 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
SDHD-208ENST00000534010 USP47Q96K76 1375 aa15.35■□□□□ 0.05
SDHD-208ENST00000534010 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
SDHD-208ENST00000534010 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 NLRP6P59044 892 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 MYOM1P52179 1685 aa15.34■□□□□ 0.05
SDHD-208ENST00000534010 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
SDHD-208ENST00000534010 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
SDHD-208ENST00000534010 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
SDHD-208ENST00000534010 FAM98CQ17RN3 349 aaKnown RBP15.32■□□□□ 0.04
SDHD-208ENST00000534010 KRT27Q7Z3Y8 459 aa15.32■□□□□ 0.04
SDHD-208ENST00000534010 LTN1O94822 1766 aa15.31■□□□□ 0.04
SDHD-208ENST00000534010 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
SDHD-208ENST00000534010 DISP2A7MBM2 1401 aa15.31■□□□□ 0.04
SDHD-208ENST00000534010 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SDHD-208ENST00000534010 CRB1P82279 1406 aa15.3■□□□□ 0.04
SDHD-208ENST00000534010 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
SDHD-208ENST00000534010 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
SDHD-208ENST00000534010 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
SDHD-208ENST00000534010 THRAP3Q9Y2W1 955 aaKnown RBP15.29■□□□□ 0.04
SDHD-208ENST00000534010 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 755.9 ms