RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 BOLA1Q9Y3E2 137 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 PCDHGA10Q9Y5H3 936 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 hCG_2014768A0A024R1R8 64 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 RCCD1A6NED2 376 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 PIK3CDO00329 1044 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 GTF2F1P35269 517 aaKnown RBP eCLIP6.39□□□□□ -1.39
C11orf54-213ENST00000533585 SCNN1AP37088 669 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 SDE2Q6IQ49 451 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 GLYCTKQ8IVS8 523 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 PLEKHM2Q8IWE5 1019 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 EPS8L1Q8TE68 723 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 RBM27Q9P2N5 1060 aaKnown RBP6.39□□□□□ -1.39
C11orf54-213ENST00000533585 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 SUGT1Q9Y2Z0 365 aa6.39□□□□□ -1.39
C11orf54-213ENST00000533585 USP17L5A8MUK1 530 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 H3BRB1 525 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 TPD52L2O43399 206 aaKnown RBP6.38□□□□□ -1.39
C11orf54-213ENST00000533585 FDX1P10109 184 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 RASA1P20936 1047 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 IBSPP21815 317 aaPredicted RBP6.38□□□□□ -1.39
C11orf54-213ENST00000533585 GORABQ5T7V8 394 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 TTC13Q8NBP0 860 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 TUT1Q9H6E5 874 aaKnown RBP6.38□□□□□ -1.39
C11orf54-213ENST00000533585 PRDM16Q9HAZ2 1276 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
C11orf54-213ENST00000533585 DCTN4Q9UJW0 460 aa6.38□□□□□ -1.39
C11orf54-213ENST00000533585 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 PTK7Q13308 1070 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 PTPROQ16827 1216 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 EGFLAMQ63HQ2 1017 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 SLF2Q8IX21 1173 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 DEPDC4Q8N2C3 294 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 LARGE2Q8N3Y3 721 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 SLC43A3Q8NBI5 491 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 C1orf216Q8TAB5 229 aa6.37□□□□□ -1.39
C11orf54-213ENST00000533585 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-213ENST00000533585 TTLL13PA6NNM8 815 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ICMTO60725 284 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-213ENST00000533585 MRPL58Q14197 206 aaKnown RBP6.36□□□□□ -1.39
C11orf54-213ENST00000533585 SWI5Q1ZZU3 235 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 NT5DC4Q86YG4 428 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ANKMY2Q8IV38 441 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 PTCD2Q8WV60 388 aaKnown RBP6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ARMC5Q96C12 935 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 GPATCH3Q96I76 525 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 TINF2Q9BSI4 451 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 NLRP2Q9NX02 1062 aa6.36□□□□□ -1.39
C11orf54-213ENST00000533585 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 TIE1P35590 1138 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 ANAPC15P60006 121 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 USP46P62068 366 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 NR1H3Q13133 447 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 NR6A1Q15406 480 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 TMEM87AQ8NBN3 555 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 PMFBP1Q8TBY8 1022 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 SPACA7Q96KW9 195 aa6.35□□□□□ -1.39
C11orf54-213ENST00000533585 PRSS12P56730 875 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 MTMR2Q13614 643 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
C11orf54-213ENST00000533585 C6orf132Q5T0Z8 1188 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 EXOC8Q8IYI6 725 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 PDCD7Q8N8D1 485 aaKnown RBP6.34□□□□□ -1.39
C11orf54-213ENST00000533585 RDH13Q8NBN7 331 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 KCNB2Q92953 911 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 MS4A3Q96HJ5 214 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 TGIF2Q9GZN2 237 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 ZSWIM4Q9H7M6 989 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 SLC52A1Q9NWF4 448 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 TBX22Q9Y458 520 aa6.34□□□□□ -1.39
C11orf54-213ENST00000533585 PPP1R3GB7ZBB8 358 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 HOXA2O43364 376 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 C21orf2O43822 256 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 DPYDQ12882 1025 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 VTI1AQ96AJ9 217 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 PIF1Q9H611 641 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 PCDHGC3Q9UN70 934 aa6.33□□□□□ -1.4
C11orf54-213ENST00000533585 PRMT3O60678 531 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 ITGAEP38570 1179 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 XPCQ01831 940 aaPredicted RBP6.32□□□□□ -1.4
C11orf54-213ENST00000533585 METTL16Q86W50 562 aaKnown RBP6.32□□□□□ -1.4
C11orf54-213ENST00000533585 RGL4Q8IZJ4 473 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 ZCRB1Q8TBF4 217 aaKnown RBP6.32□□□□□ -1.4
C11orf54-213ENST00000533585 RNF34Q969K3 372 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 MRS2Q9HD23 443 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 TRIM35Q9UPQ4 493 aa6.32□□□□□ -1.4
C11orf54-213ENST00000533585 CFAP99D6REC4 459 aa6.31□□□□□ -1.4
C11orf54-213ENST00000533585 DNAJB2P25686 324 aa6.31□□□□□ -1.4
C11orf54-213ENST00000533585 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
C11orf54-213ENST00000533585 NCOA4Q13772 614 aa6.31□□□□□ -1.4
C11orf54-213ENST00000533585 SOGA3Q5TF21 947 aa6.31□□□□□ -1.4
C11orf54-213ENST00000533585 TMEM92Q6UXU6 159 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms