RNA–Protein interactions for RNA: ENST00000531690.5

GMDS-209, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-209ENST00000531690 METP08581 1390 aa8.46□□□□□ -1.06
GMDS-209ENST00000531690 EDC4Q6P2E9 1401 aaKnown RBP8.46□□□□□ -1.06
GMDS-209ENST00000531690 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 NEFMP07197 916 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 TNNT2P45379 298 aaPredicted RBP8.45□□□□□ -1.06
GMDS-209ENST00000531690 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 RNF123Q5XPI4 1314 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 PLEKHH1Q9ULM0 1364 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 ADAMTS13Q76LX8 1427 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 CD163L1Q9NR16 1453 aa8.45□□□□□ -1.06
GMDS-209ENST00000531690 TOPAZ1Q8N9V7 1692 aa8.44□□□□□ -1.06
GMDS-209ENST00000531690 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
GMDS-209ENST00000531690 ZNF692Q9BU19 519 aaPredicted RBP8.44□□□□□ -1.06
GMDS-209ENST00000531690 E9PSI1 815 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 MTHFSP49914 203 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 WAPLQ7Z5K2 1190 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
GMDS-209ENST00000531690 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
GMDS-209ENST00000531690 XRN1Q8IZH2 1706 aaKnown RBP8.43□□□□□ -1.06
GMDS-209ENST00000531690 SENP3-EIF4A1A0A087X0R7 540 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
GMDS-209ENST00000531690 CCDC136Q96JN2 1154 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 CCDC61Q9Y6R9 512 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 IQSEC2Q5JU85 1478 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 ADAMTSL3P82987 1691 aa8.42□□□□□ -1.06
GMDS-209ENST00000531690 APAF1O14727 1248 aa8.41□□□□□ -1.06
GMDS-209ENST00000531690 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
GMDS-209ENST00000531690 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
GMDS-209ENST00000531690 TBX22Q9Y458 520 aa8.41□□□□□ -1.06
GMDS-209ENST00000531690 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.06
GMDS-209ENST00000531690 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
GMDS-209ENST00000531690 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.06
GMDS-209ENST00000531690 CPSF1Q10570 1443 aaKnown RBP8.4□□□□□ -1.06
GMDS-209ENST00000531690 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
GMDS-209ENST00000531690 ZNF521Q96K83 1311 aa8.4□□□□□ -1.06
GMDS-209ENST00000531690 U2AF1L5P0DN76 240 aaPredicted RBP8.4□□□□□ -1.06
GMDS-209ENST00000531690 U2AF1Q01081 240 aaKnown RBP eCLIP8.4□□□□□ -1.06
GMDS-209ENST00000531690 COG3Q96JB2 828 aa8.4□□□□□ -1.06
GMDS-209ENST00000531690 COL3A1P02461 1466 aaPredicted RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 SETD1BQ9UPS6 1966 aaKnown RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 FYB1O15117 783 aa8.39□□□□□ -1.07
GMDS-209ENST00000531690 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 LTKP29376 864 aa8.39□□□□□ -1.07
GMDS-209ENST00000531690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■■□□□ 12.6
GMDS-209ENST00000531690 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
GMDS-209ENST00000531690 RBM42Q9BTD8 480 aaKnown RBP8.39□□□□□ -1.07
GMDS-209ENST00000531690 MYH16Q9H6N6 1097 aa8.39□□□□□ -1.07
GMDS-209ENST00000531690 ANKARQ7Z5J8 1434 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 AATKQ6ZMQ8 1374 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 SLFN5Q08AF3 891 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 CCDC27Q2M243 656 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 DUSP27Q5VZP5 1158 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 ANKLE2Q86XL3 938 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
GMDS-209ENST00000531690 MAP2P11137 1827 aaKnown RBP8.38□□□□□ -1.07
GMDS-209ENST00000531690 FMN2Q9NZ56 1722 aa8.37□□□□□ -1.07
GMDS-209ENST00000531690 PTPRUQ92729 1446 aa8.37□□□□□ -1.07
GMDS-209ENST00000531690 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
GMDS-209ENST00000531690 TTC21AQ8NDW8 1320 aa8.36□□□□□ -1.07
GMDS-209ENST00000531690 LRRC7Q96NW7 1537 aa8.36□□□□□ -1.07
GMDS-209ENST00000531690 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
GMDS-209ENST00000531690 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
GMDS-209ENST00000531690 NALCNQ8IZF0 1738 aa8.36□□□□□ -1.07
GMDS-209ENST00000531690 USP6P35125 1406 aa8.36□□□□□ -1.07
GMDS-209ENST00000531690 PNPLA6Q8IY17 1366 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
GMDS-209ENST00000531690 CT47B1P0C2W7 299 aaPredicted RBP8.35□□□□□ -1.07
GMDS-209ENST00000531690 LMOD3Q0VAK6 560 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 NEUROD2Q15784 382 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 TSHZ2Q9NRE2 1034 aa8.35□□□□□ -1.07
GMDS-209ENST00000531690 DNAJC5Q9H3Z4 198 aa8.34□□□□□ -1.07
GMDS-209ENST00000531690 ACEP12821 1306 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
GMDS-209ENST00000531690 FCHSD2O94868 740 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 MS4A1P11836 297 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 NME9Q86XW9 330 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
GMDS-209ENST00000531690 NGDNQ8NEJ9 315 aaKnown RBP8.33□□□□□ -1.08
GMDS-209ENST00000531690 EXOC6Q8TAG9 804 aa8.33□□□□□ -1.08
GMDS-209ENST00000531690 RRP7AQ9Y3A4 280 aaKnown RBP8.33□□□□□ -1.08
GMDS-209ENST00000531690 IL16Q14005 1332 aa8.32□□□□□ -1.08
GMDS-209ENST00000531690 NWD1Q149M9 1564 aa8.32□□□□□ -1.08
GMDS-209ENST00000531690 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
GMDS-209ENST00000531690 POLKQ9UBT6 870 aa8.32□□□□□ -1.08
GMDS-209ENST00000531690 USP54Q70EL1 1684 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms