RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 EN1Q05925 392 aaPredicted RBP31.1■■■□□ 2.57
CHKA-206ENST00000531341 SPATA31A5Q5VU36 1347 aa31.09■■■□□ 2.57
CHKA-206ENST00000531341 SPATA31A7Q8IWB4 1347 aa31.09■■■□□ 2.57
CHKA-206ENST00000531341 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
CHKA-206ENST00000531341 COL14A1Q05707 1796 aaKnown RBP31.08■■■□□ 2.57
CHKA-206ENST00000531341 TULP4Q9NRJ4 1543 aa31.08■■■□□ 2.57
CHKA-206ENST00000531341 PAK3O75914 559 aaPredicted RBP31.07■■■□□ 2.56
CHKA-206ENST00000531341 HRCP23327 699 aa31.07■■■□□ 2.56
CHKA-206ENST00000531341 DCAF11Q8TEB1 546 aa31.07■■■□□ 2.56
CHKA-206ENST00000531341 LRP5O75197 1615 aa31.06■■■□□ 2.56
CHKA-206ENST00000531341 NGDNQ8NEJ9 315 aaKnown RBP31.05■■■□□ 2.56
CHKA-206ENST00000531341 CRYBG1Q9Y4K1 1723 aa31.03■■■□□ 2.56
CHKA-206ENST00000531341 EIF3AQ14152 1382 aaKnown RBP31.02■■■□□ 2.56
CHKA-206ENST00000531341 PRDM11Q9NQV5 511 aa31.01■■■□□ 2.55
CHKA-206ENST00000531341 CHRNA2Q15822 529 aa30.99■■■□□ 2.55
CHKA-206ENST00000531341 THSD7AQ9UPZ6 1657 aa30.99■■■□□ 2.55
CHKA-206ENST00000531341 KIAA0232Q92628 1395 aa30.98■■■□□ 2.55
CHKA-206ENST00000531341 R3HDM1Q15032 1099 aaKnown RBP30.97■■■□□ 2.55
CHKA-206ENST00000531341 NUDT16Q96DE0 195 aaKnown RBP30.97■■■□□ 2.55
CHKA-206ENST00000531341 EZH2Q15910 746 aaKnown RBP30.96■■■□□ 2.55
CHKA-206ENST00000531341 SPATA31A1Q5TZJ5 1347 aa30.96■■■□□ 2.55
CHKA-206ENST00000531341 NUTM2GQ5VZR2 741 aa30.95■■■□□ 2.55
CHKA-206ENST00000531341 RGPD1P0DJD0 1748 aa30.95■■■□□ 2.54
CHKA-206ENST00000531341 ATP7BP35670 1465 aa30.95■■■□□ 2.54
CHKA-206ENST00000531341 ZC3H6P61129 1189 aaKnown RBP30.94■■■□□ 2.54
CHKA-206ENST00000531341 STRN4Q9NRL3 753 aa30.94■■■□□ 2.54
CHKA-206ENST00000531341 DISP2A7MBM2 1401 aa30.91■■■□□ 2.54
CHKA-206ENST00000531341 TNS1Q9HBL0 1735 aaKnown RBP30.91■■■□□ 2.54
CHKA-206ENST00000531341 TRIM37O94972 964 aa30.91■■■□□ 2.54
CHKA-206ENST00000531341 CDK19Q9BWU1 502 aa30.9■■■□□ 2.54
CHKA-206ENST00000531341 CAMKK2Q96RR4 588 aa30.89■■■□□ 2.54
CHKA-206ENST00000531341 ARHGEF28Q8N1W1 1705 aaKnown RBP30.89■■■□□ 2.54
CHKA-206ENST00000531341 USP35Q9P2H5 1018 aa30.88■■■□□ 2.53
CHKA-206ENST00000531341 PHRF1Q9P1Y6 1649 aaKnown RBP30.87■■■□□ 2.53
CHKA-206ENST00000531341 STAC3Q96MF2 364 aa30.86■■■□□ 2.53
CHKA-206ENST00000531341 ACEP12821 1306 aa30.85■■■□□ 2.53
CHKA-206ENST00000531341 NBPF8Q3BBV2 869 aa30.85■■■□□ 2.53
CHKA-206ENST00000531341 FAM196AQ6ZSG2 479 aa30.85■■■□□ 2.53
CHKA-206ENST00000531341 POLR3AO14802 1390 aaPredicted RBP30.83■■■□□ 2.53
CHKA-206ENST00000531341 ITSN1Q15811 1721 aa30.83■■■□□ 2.53
CHKA-206ENST00000531341 APBA3O96018 575 aa30.82■■■□□ 2.52
CHKA-206ENST00000531341 LARP1Q6PKG0 1096 aaKnown RBP30.81■■■□□ 2.52
CHKA-206ENST00000531341 EVA1CP58658 441 aa30.8■■■□□ 2.52
CHKA-206ENST00000531341 CCDC61Q9Y6R9 512 aa30.8■■■□□ 2.52
CHKA-206ENST00000531341 SSH2Q76I76 1423 aa30.8■■■□□ 2.52
CHKA-206ENST00000531341 CAMTA1Q9Y6Y1 1673 aa30.79■■■□□ 2.52
CHKA-206ENST00000531341 PLEKHG3A1L390 1219 aa30.79■■■□□ 2.52
CHKA-206ENST00000531341 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
CHKA-206ENST00000531341 ABTB2Q8N961 1025 aa30.77■■■□□ 2.52
CHKA-206ENST00000531341 TOPAZ1Q8N9V7 1692 aa30.77■■■□□ 2.52
CHKA-206ENST00000531341 NRKQ7Z2Y5 1582 aa30.75■■■□□ 2.51
CHKA-206ENST00000531341 PDE3BQ13370 1112 aa30.75■■■□□ 2.51
CHKA-206ENST00000531341 NBPF1Q3BBV0 1214 aa30.75■■■□□ 2.51
CHKA-206ENST00000531341 USP19O94966 1318 aa30.73■■■□□ 2.51
CHKA-206ENST00000531341 TCP11L2Q8N4U5 519 aa30.72■■■□□ 2.51
CHKA-206ENST00000531341 CPDO75976 1380 aa30.71■■■□□ 2.51
CHKA-206ENST00000531341 LMO7Q8WWI1 1683 aa30.71■■■□□ 2.51
CHKA-206ENST00000531341 PARD3Q8TEW0 1356 aa30.7■■■□□ 2.51
CHKA-206ENST00000531341 GCP02774 474 aa30.69■■■□□ 2.5
CHKA-206ENST00000531341 CABP2Q9NPB3 220 aa30.67■■■□□ 2.5
CHKA-206ENST00000531341 RREB1Q92766 1687 aa30.67■■■□□ 2.5
CHKA-206ENST00000531341 PPIP5K1Q6PFW1 1433 aa30.65■■■□□ 2.5
CHKA-206ENST00000531341 NLRP13Q86W25 1043 aa30.65■■■□□ 2.5
CHKA-206ENST00000531341 NUP188Q5SRE5 1749 aa30.64■■■□□ 2.5
CHKA-206ENST00000531341 SRPK2P78362 688 aaKnown RBP30.64■■■□□ 2.5
CHKA-206ENST00000531341 THRAP3Q9Y2W1 955 aaKnown RBP30.64■■■□□ 2.5
CHKA-206ENST00000531341 COL5A2P05997 1499 aaPredicted RBP30.63■■■□□ 2.49
CHKA-206ENST00000531341 KIAA1210Q9ULL0 1709 aa30.61■■■□□ 2.49
CHKA-206ENST00000531341 ZBTB7CA1YPR0 619 aa30.6■■■□□ 2.49
CHKA-206ENST00000531341 NBPF14Q5TI25 921 aa30.6■■■□□ 2.49
CHKA-206ENST00000531341 CENPJQ9HC77 1338 aaPredicted RBP30.58■■■□□ 2.49
CHKA-206ENST00000531341 CABP1Q9NZU7 370 aa30.58■■■□□ 2.49
CHKA-206ENST00000531341 PARP4Q9UKK3 1724 aaKnown RBP30.56■■■□□ 2.48
CHKA-206ENST00000531341 CRB1P82279 1406 aa30.56■■■□□ 2.48
CHKA-206ENST00000531341 NLRP6P59044 892 aa30.55■■■□□ 2.48
CHKA-206ENST00000531341 PTF1AQ7RTS3 328 aa30.55■■■□□ 2.48
CHKA-206ENST00000531341 AXIN2Q9Y2T1 843 aa30.52■■■□□ 2.48
CHKA-206ENST00000531341 USP6P35125 1406 aa30.52■■■□□ 2.48
CHKA-206ENST00000531341 PEAK1Q9H792 1746 aa30.52■■■□□ 2.48
CHKA-206ENST00000531341 AATKQ6ZMQ8 1374 aa30.52■■■□□ 2.48
CHKA-206ENST00000531341 KCNQ2O43526 872 aa30.5■■■□□ 2.47
CHKA-206ENST00000531341 BRD4O60885 1362 aaPredicted RBP30.5■■■□□ 2.47
CHKA-206ENST00000531341 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
CHKA-206ENST00000531341 OVOS2A0A0J9YW53 1432 aa30.49■■■□□ 2.47
CHKA-206ENST00000531341 OVOS2Q6IE36 1432 aa30.49■■■□□ 2.47
CHKA-206ENST00000531341 SLIT3O75094 1523 aa30.49■■■□□ 2.47
CHKA-206ENST00000531341 SPON1Q9HCB6 807 aa30.49■■■□□ 2.47
CHKA-206ENST00000531341 DDB1Q16531 1140 aa30.48■■■□□ 2.47
CHKA-206ENST00000531341 TOM1L2Q6ZVM7 507 aa30.48■■■□□ 2.47
CHKA-206ENST00000531341 PLSCR1O15162 318 aa30.47■■■□□ 2.47
CHKA-206ENST00000531341 YY1P25490 414 aa30.47■■■□□ 2.47
CHKA-206ENST00000531341 ANO8Q9HCE9 1232 aaPredicted RBP30.47■■■□□ 2.47
CHKA-206ENST00000531341 QRICH2Q9H0J4 1663 aa30.46■■■□□ 2.47
CHKA-206ENST00000531341 PPP1R1BQ9UD71 204 aaPredicted RBP30.46■■■□□ 2.47
CHKA-206ENST00000531341 LRRC37A3O60309 1634 aa30.46■■■□□ 2.47
CHKA-206ENST00000531341 PDGFDQ9GZP0 370 aaPredicted RBP30.45■■■□□ 2.47
CHKA-206ENST00000531341 COL18A1P39060 1754 aa30.45■■■□□ 2.46
CHKA-206ENST00000531341 C11orf95C9JLR9 678 aaPredicted RBP30.44■■■□□ 2.46
CHKA-206ENST00000531341 PROM2Q8N271 834 aa30.44■■■□□ 2.46
CHKA-206ENST00000531341 MARCH10Q8NA82 808 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms