RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
SF3B2-211ENST00000531041 EDC4Q6P2E9 1401 aaKnown RBP23.38■■□□□ 1.33
SF3B2-211ENST00000531041 HSPA1LP34931 641 aa23.36■■□□□ 1.33
SF3B2-211ENST00000531041 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
SF3B2-211ENST00000531041 PANK3Q9H999 370 aa23.36■■□□□ 1.33
SF3B2-211ENST00000531041 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
SF3B2-211ENST00000531041 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
SF3B2-211ENST00000531041 TNS3Q68CZ2 1445 aa23.35■■□□□ 1.33
SF3B2-211ENST00000531041 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
SF3B2-211ENST00000531041 PIK3C2AO00443 1686 aa23.35■■□□□ 1.33
SF3B2-211ENST00000531041 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
SF3B2-211ENST00000531041 TTC21BQ7Z4L5 1316 aa23.33■■□□□ 1.33
SF3B2-211ENST00000531041 TTC21AQ8NDW8 1320 aa23.33■■□□□ 1.33
SF3B2-211ENST00000531041 PAK3O75914 559 aaPredicted RBP23.33■■□□□ 1.32
SF3B2-211ENST00000531041 COL22A1Q8NFW1 1626 aaPredicted RBP23.32■■□□□ 1.32
SF3B2-211ENST00000531041 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
SF3B2-211ENST00000531041 NSD3Q9BZ95 1437 aa23.31■■□□□ 1.32
SF3B2-211ENST00000531041 MARF1Q9Y4F3 1742 aaKnown RBP23.31■■□□□ 1.32
SF3B2-211ENST00000531041 CRYBG1Q9Y4K1 1723 aa23.3■■□□□ 1.32
SF3B2-211ENST00000531041 ARHGEF10O15013 1369 aa23.3■■□□□ 1.32
SF3B2-211ENST00000531041 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
SF3B2-211ENST00000531041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.28■■□□□ 1.32
SF3B2-211ENST00000531041 ABTB2Q8N961 1025 aa23.28■■□□□ 1.32
SF3B2-211ENST00000531041 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
SF3B2-211ENST00000531041 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
SF3B2-211ENST00000531041 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
SF3B2-211ENST00000531041 PNPLA6Q8IY17 1366 aa23.27■■□□□ 1.32
SF3B2-211ENST00000531041 JCADQ9P266 1359 aa23.27■■□□□ 1.32
SF3B2-211ENST00000531041 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
SF3B2-211ENST00000531041 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
SF3B2-211ENST00000531041 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
SF3B2-211ENST00000531041 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
SF3B2-211ENST00000531041 PHRF1Q9P1Y6 1649 aaKnown RBP23.24■■□□□ 1.31
SF3B2-211ENST00000531041 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
SF3B2-211ENST00000531041 NME9Q86XW9 330 aa23.24■■□□□ 1.31
SF3B2-211ENST00000531041 FYB1O15117 783 aa23.23■■□□□ 1.31
SF3B2-211ENST00000531041 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
SF3B2-211ENST00000531041 NLRP6P59044 892 aa23.22■■□□□ 1.31
SF3B2-211ENST00000531041 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
SF3B2-211ENST00000531041 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
SF3B2-211ENST00000531041 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
SF3B2-211ENST00000531041 ILDR1Q86SU0 546 aaPredicted RBP23.2■■□□□ 1.3
SF3B2-211ENST00000531041 USP19O94966 1318 aa23.19■■□□□ 1.3
SF3B2-211ENST00000531041 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
SF3B2-211ENST00000531041 ZRANB1Q9UGI0 708 aa23.19■■□□□ 1.3
SF3B2-211ENST00000531041 SLIT3O75094 1523 aa23.19■■□□□ 1.3
SF3B2-211ENST00000531041 NSD2O96028 1365 aa23.19■■□□□ 1.3
SF3B2-211ENST00000531041 NPC1L1Q9UHC9 1359 aa23.18■■□□□ 1.3
SF3B2-211ENST00000531041 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
SF3B2-211ENST00000531041 GGNBP2Q9H3C7 697 aa23.17■■□□□ 1.3
SF3B2-211ENST00000531041 COG3Q96JB2 828 aa23.16■■□□□ 1.3
SF3B2-211ENST00000531041 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
SF3B2-211ENST00000531041 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
SF3B2-211ENST00000531041 LTN1O94822 1766 aa23.14■■□□□ 1.29
SF3B2-211ENST00000531041 NFAT5O94916 1531 aa23.13■■□□□ 1.29
SF3B2-211ENST00000531041 GCP02774 474 aa23.12■■□□□ 1.29
SF3B2-211ENST00000531041 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
SF3B2-211ENST00000531041 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
SF3B2-211ENST00000531041 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
SF3B2-211ENST00000531041 LRP6O75581 1613 aa23.1■■□□□ 1.29
SF3B2-211ENST00000531041 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
SF3B2-211ENST00000531041 NUTM2BA6NNL0 878 aaPredicted RBP23.08■■□□□ 1.29
SF3B2-211ENST00000531041 NUTM2EB1AL46 878 aaPredicted RBP23.08■■□□□ 1.29
SF3B2-211ENST00000531041 NUTM2AQ8IVF1 878 aaPredicted RBP23.08■■□□□ 1.29
SF3B2-211ENST00000531041 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
SF3B2-211ENST00000531041 CPDO75976 1380 aa23.06■■□□□ 1.28
SF3B2-211ENST00000531041 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
SF3B2-211ENST00000531041 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
SF3B2-211ENST00000531041 COL18A1P39060 1754 aa23.05■■□□□ 1.28
SF3B2-211ENST00000531041 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
SF3B2-211ENST00000531041 SOX12O15370 315 aa23.04■■□□□ 1.28
SF3B2-211ENST00000531041 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
SF3B2-211ENST00000531041 KIAA0232Q92628 1395 aa23.03■■□□□ 1.28
SF3B2-211ENST00000531041 ADAMTS2O95450 1211 aa23.03■■□□□ 1.28
SF3B2-211ENST00000531041 ZC3H6P61129 1189 aaKnown RBP23.03■■□□□ 1.28
SF3B2-211ENST00000531041 NWD2Q9ULI1 1742 aa23.03■■□□□ 1.28
SF3B2-211ENST00000531041 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
SF3B2-211ENST00000531041 LMO7Q8WWI1 1683 aa23.02■■□□□ 1.28
SF3B2-211ENST00000531041 FBLN1P23142 703 aa23.01■■□□□ 1.27
SF3B2-211ENST00000531041 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
SF3B2-211ENST00000531041 ABCC6O95255 1503 aa23.01■■□□□ 1.27
SF3B2-211ENST00000531041 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
SF3B2-211ENST00000531041 TNNT2P45379 298 aaPredicted RBP22.99■■□□□ 1.27
SF3B2-211ENST00000531041 PRDM11Q9NQV5 511 aa22.99■■□□□ 1.27
SF3B2-211ENST00000531041 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
SF3B2-211ENST00000531041 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
SF3B2-211ENST00000531041 MAP3K19Q56UN5 1328 aa22.98■■□□□ 1.27
SF3B2-211ENST00000531041 RRS1Q15050 365 aaKnown RBP22.98■■□□□ 1.27
SF3B2-211ENST00000531041 KIF24Q5T7B8 1368 aa22.97■■□□□ 1.27
SF3B2-211ENST00000531041 RALBP1Q15311 655 aa22.97■■□□□ 1.27
SF3B2-211ENST00000531041 MEX3CQ5U5Q3 659 aaKnown RBP22.97■■□□□ 1.27
SF3B2-211ENST00000531041 POLKQ9UBT6 870 aa22.97■■□□□ 1.27
SF3B2-211ENST00000531041 NRAPQ86VF7 1730 aa22.96■■□□□ 1.27
SF3B2-211ENST00000531041 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.96■■□□□ 1.27
SF3B2-211ENST00000531041 SMG6Q86US8 1419 aaKnown RBP22.96■■□□□ 1.27
SF3B2-211ENST00000531041 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
SF3B2-211ENST00000531041 SLIT2O94813 1529 aa22.95■■□□□ 1.26
SF3B2-211ENST00000531041 C8orf37Q96NL8 207 aa22.95■■□□□ 1.26
SF3B2-211ENST00000531041 PRKRIP1Q9H875 184 aaPredicted RBP22.95■■□□□ 1.26
SF3B2-211ENST00000531041 RTL1A6NKG5 1358 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms