RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 DNAJC2Q99543 621 aaKnown RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 TCP11L2Q8N4U5 519 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-227ENST00000530748 GNAI2P04899 355 aa10.18□□□□□ -0.78
CTNND1-227ENST00000530748 TEX35Q5T0J7 233 aa10.18□□□□□ -0.78
CTNND1-227ENST00000530748 EPS15P42566 896 aa10.18□□□□□ -0.78
CTNND1-227ENST00000530748 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
CTNND1-227ENST00000530748 ZNF692Q9BU19 519 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-227ENST00000530748 EXOSC9Q06265 439 aaKnown RBP10.17□□□□□ -0.78
CTNND1-227ENST00000530748 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 AK7Q96M32 723 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 CCT4P50991 539 aaKnown RBP10.17□□□□□ -0.78
CTNND1-227ENST00000530748 NAP1L1P55209 391 aaKnown RBP10.17□□□□□ -0.78
CTNND1-227ENST00000530748 RPGRIP1LQ68CZ1 1315 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 CUL7Q14999 1698 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 MCM2P49736 904 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
CTNND1-227ENST00000530748 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CTNND1-227ENST00000530748 SURF6O75683 361 aaKnown RBP10.17□□□□□ -0.78
CTNND1-227ENST00000530748 CT47B1P0C2W7 299 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-227ENST00000530748 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-227ENST00000530748 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 KIF14Q15058 1648 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 ZNF771Q7L3S4 317 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-227ENST00000530748 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-227ENST00000530748 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■□□ 16.3
CTNND1-227ENST00000530748 IFT57Q9NWB7 429 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 NESP48681 1621 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
CTNND1-227ENST00000530748 GNL3LQ9NVN8 582 aaKnown RBP10.16□□□□□ -0.78
CTNND1-227ENST00000530748 CABP4P57796 275 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 RUFY1Q96T51 708 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-227ENST00000530748 WDR63Q8IWG1 891 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 RABEP1Q15276 862 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-227ENST00000530748 CNNM1Q9NRU3 951 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
CTNND1-227ENST00000530748 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-227ENST00000530748 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
CTNND1-227ENST00000530748 TSPY26PQ9H489 355 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 CDR1P51861 262 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-227ENST00000530748 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 CT47A1Q5JQC4 288 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-227ENST00000530748 PDILTQ8N807 584 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-227ENST00000530748 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
CTNND1-227ENST00000530748 IQGAP2Q13576 1575 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 PRXQ9BXM0 1461 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 PCF11O94913 1555 aaKnown RBP10.13□□□□□ -0.79
CTNND1-227ENST00000530748 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 CCP110O43303 1012 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 MRE11P49959 708 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 PTPN23Q9H3S7 1636 aa10.13□□□□□ -0.79
CTNND1-227ENST00000530748 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-227ENST00000530748 FAM177BA6PVY3 158 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 TXLNAP40222 546 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-227ENST00000530748 ZSCAN25Q6NSZ9 544 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 SLC52A1Q9NWF4 448 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 MBD3O95983 291 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 SMARCE1Q969G3 411 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
CTNND1-227ENST00000530748 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
CTNND1-227ENST00000530748 PDCP20941 246 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
CTNND1-227ENST00000530748 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
CTNND1-227ENST00000530748 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 FAM43AQ8N2R8 423 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 CAMSAP2Q08AD1 1489 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms