RNA–Protein interactions for RNA: ENST00000530522.1

THUMPD2-208, Transcript of THUMP domain containing 2, humanhuman

TSL 2

Gene THUMPD2, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-208ENST00000530522 FOXO3O43524 673 aa22.37■■□□□ 1.17
THUMPD2-208ENST00000530522 SLAIN2Q9P270 581 aa22.37■■□□□ 1.17
THUMPD2-208ENST00000530522 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
THUMPD2-208ENST00000530522 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
THUMPD2-208ENST00000530522 NME9Q86XW9 330 aa22.36■■□□□ 1.17
THUMPD2-208ENST00000530522 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
THUMPD2-208ENST00000530522 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
THUMPD2-208ENST00000530522 MRS2Q9HD23 443 aa22.35■■□□□ 1.17
THUMPD2-208ENST00000530522 TTC21AQ8NDW8 1320 aa22.35■■□□□ 1.17
THUMPD2-208ENST00000530522 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
THUMPD2-208ENST00000530522 NRKQ7Z2Y5 1582 aa22.34■■□□□ 1.17
THUMPD2-208ENST00000530522 COG3Q96JB2 828 aa22.33■■□□□ 1.17
THUMPD2-208ENST00000530522 PPP2R1AP30153 589 aa22.33■■□□□ 1.16
THUMPD2-208ENST00000530522 BRD4O60885 1362 aaPredicted RBP22.32■■□□□ 1.16
THUMPD2-208ENST00000530522 SSH2Q76I76 1423 aa22.32■■□□□ 1.16
THUMPD2-208ENST00000530522 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
THUMPD2-208ENST00000530522 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
THUMPD2-208ENST00000530522 BRINP3Q76B58 766 aa22.3■■□□□ 1.16
THUMPD2-208ENST00000530522 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
THUMPD2-208ENST00000530522 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
THUMPD2-208ENST00000530522 ABTB2Q8N961 1025 aa22.29■■□□□ 1.16
THUMPD2-208ENST00000530522 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
THUMPD2-208ENST00000530522 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
THUMPD2-208ENST00000530522 DDX17Q92841 729 aaKnown RBP22.27■■□□□ 1.16
THUMPD2-208ENST00000530522 NLRP6P59044 892 aa22.26■■□□□ 1.15
THUMPD2-208ENST00000530522 LMOD2Q6P5Q4 547 aa22.25■■□□□ 1.15
THUMPD2-208ENST00000530522 NUTM2GQ5VZR2 741 aa22.25■■□□□ 1.15
THUMPD2-208ENST00000530522 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
THUMPD2-208ENST00000530522 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
THUMPD2-208ENST00000530522 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
THUMPD2-208ENST00000530522 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
THUMPD2-208ENST00000530522 MTHFSP49914 203 aa22.22■■□□□ 1.15
THUMPD2-208ENST00000530522 USP31Q70CQ4 1352 aa22.22■■□□□ 1.15
THUMPD2-208ENST00000530522 TOM1O60784 492 aa22.21■■□□□ 1.15
THUMPD2-208ENST00000530522 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
THUMPD2-208ENST00000530522 SOX12O15370 315 aa22.21■■□□□ 1.15
THUMPD2-208ENST00000530522 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
THUMPD2-208ENST00000530522 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
THUMPD2-208ENST00000530522 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
THUMPD2-208ENST00000530522 FBLN1P23142 703 aa22.19■■□□□ 1.14
THUMPD2-208ENST00000530522 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
THUMPD2-208ENST00000530522 TRPM3Q9HCF6 1732 aaPredicted RBP22.18■■□□□ 1.14
THUMPD2-208ENST00000530522 PXDNQ92626 1479 aa22.18■■□□□ 1.14
THUMPD2-208ENST00000530522 AATKQ6ZMQ8 1374 aa22.17■■□□□ 1.14
THUMPD2-208ENST00000530522 UBAP1LF5GYI3 381 aa22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 PLEKHG5O94827 1062 aa22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 RRS1Q15050 365 aaKnown RBP22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 TNS3Q68CZ2 1445 aa22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 CERKQ8TCT0 537 aa22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 POLKQ9UBT6 870 aa22.16■■□□□ 1.14
THUMPD2-208ENST00000530522 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
THUMPD2-208ENST00000530522 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
THUMPD2-208ENST00000530522 ROBO1Q9Y6N7 1651 aa22.15■■□□□ 1.14
THUMPD2-208ENST00000530522 SOS2Q07890 1332 aaPredicted RBP22.15■■□□□ 1.14
THUMPD2-208ENST00000530522 WDR43Q15061 677 aaKnown RBP eCLIP22.14■■□□□ 1.13
THUMPD2-208ENST00000530522 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
THUMPD2-208ENST00000530522 SPATA31A3Q5VYP0 1347 aa22.14■■□□□ 1.13
THUMPD2-208ENST00000530522 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
THUMPD2-208ENST00000530522 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
THUMPD2-208ENST00000530522 USP54Q70EL1 1684 aa22.12■■□□□ 1.13
THUMPD2-208ENST00000530522 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
THUMPD2-208ENST00000530522 ALS2Q96Q42 1657 aa22.11■■□□□ 1.13
THUMPD2-208ENST00000530522 MAP2P11137 1827 aaKnown RBP22.1■■□□□ 1.13
THUMPD2-208ENST00000530522 MARF1Q9Y4F3 1742 aaKnown RBP22.09■■□□□ 1.13
THUMPD2-208ENST00000530522 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
THUMPD2-208ENST00000530522 AMPHP49418 695 aa22.08■■□□□ 1.13
THUMPD2-208ENST00000530522 USP19O94966 1318 aa22.08■■□□□ 1.12
THUMPD2-208ENST00000530522 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.12
THUMPD2-208ENST00000530522 GCP02774 474 aa22.08■■□□□ 1.12
THUMPD2-208ENST00000530522 CDK12Q9NYV4 1490 aaPredicted RBP22.07■■□□□ 1.12
THUMPD2-208ENST00000530522 NUDCQ9Y266 331 aa22.07■■□□□ 1.12
THUMPD2-208ENST00000530522 PNPLA6Q8IY17 1366 aa22.06■■□□□ 1.12
THUMPD2-208ENST00000530522 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
THUMPD2-208ENST00000530522 DIAPH1O60610 1272 aaKnown RBP22.06■■□□□ 1.12
THUMPD2-208ENST00000530522 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
THUMPD2-208ENST00000530522 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
THUMPD2-208ENST00000530522 SLIT3O75094 1523 aa22.05■■□□□ 1.12
THUMPD2-208ENST00000530522 ADAMTS8Q9UP79 889 aa22.04■■□□□ 1.12
THUMPD2-208ENST00000530522 INSRP06213 1382 aa22.04■■□□□ 1.12
THUMPD2-208ENST00000530522 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
THUMPD2-208ENST00000530522 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
THUMPD2-208ENST00000530522 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
THUMPD2-208ENST00000530522 FLT4P35916 1363 aa22.03■■□□□ 1.12
THUMPD2-208ENST00000530522 NFAT5O94916 1531 aa22.03■■□□□ 1.12
THUMPD2-208ENST00000530522 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
THUMPD2-208ENST00000530522 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
THUMPD2-208ENST00000530522 MED1Q15648 1581 aaPredicted RBP22.02■■□□□ 1.12
THUMPD2-208ENST00000530522 KIF24Q5T7B8 1368 aa22.02■■□□□ 1.12
THUMPD2-208ENST00000530522 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
THUMPD2-208ENST00000530522 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
THUMPD2-208ENST00000530522 ZC3H6P61129 1189 aaKnown RBP22■■□□□ 1.11
THUMPD2-208ENST00000530522 HSP90AB2PQ58FF8 381 aa22■■□□□ 1.11
THUMPD2-208ENST00000530522 PHLPP1O60346 1717 aa22■■□□□ 1.11
THUMPD2-208ENST00000530522 HOXC9P31274 260 aa21.99■■□□□ 1.11
THUMPD2-208ENST00000530522 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
THUMPD2-208ENST00000530522 PEAK1Q9H792 1746 aa21.99■■□□□ 1.11
THUMPD2-208ENST00000530522 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
THUMPD2-208ENST00000530522 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
THUMPD2-208ENST00000530522 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms