RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 NEUROD1Q13562 356 aa28.35■■■□□ 2.13
COLCA2-203ENST00000528846 NBPF8Q3BBV2 869 aa28.35■■■□□ 2.13
COLCA2-203ENST00000528846 KIAA1210Q9ULL0 1709 aa28.35■■■□□ 2.13
COLCA2-203ENST00000528846 PLEKHG3A1L390 1219 aa28.34■■■□□ 2.13
COLCA2-203ENST00000528846 CENPJQ9HC77 1338 aaPredicted RBP28.34■■■□□ 2.13
COLCA2-203ENST00000528846 SRPK2P78362 688 aaKnown RBP28.33■■■□□ 2.13
COLCA2-203ENST00000528846 ALS2Q96Q42 1657 aa28.32■■■□□ 2.12
COLCA2-203ENST00000528846 ABCA3Q99758 1704 aa28.32■■■□□ 2.12
COLCA2-203ENST00000528846 NUTM2GQ5VZR2 741 aa28.32■■■□□ 2.12
COLCA2-203ENST00000528846 PRDM11Q9NQV5 511 aa28.32■■■□□ 2.12
COLCA2-203ENST00000528846 POLR3AO14802 1390 aaPredicted RBP28.31■■■□□ 2.12
COLCA2-203ENST00000528846 A0A0G2JS52 829 aa28.3■■■□□ 2.12
COLCA2-203ENST00000528846 MYT1Q01538 1121 aa28.3■■■□□ 2.12
COLCA2-203ENST00000528846 CABP2Q9NPB3 220 aa28.3■■■□□ 2.12
COLCA2-203ENST00000528846 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
COLCA2-203ENST00000528846 NWD2Q9ULI1 1742 aa28.29■■■□□ 2.12
COLCA2-203ENST00000528846 FAM98CQ17RN3 349 aaKnown RBP28.28■■■□□ 2.12
COLCA2-203ENST00000528846 KRT27Q7Z3Y8 459 aa28.28■■■□□ 2.12
COLCA2-203ENST00000528846 EP400Q96L91 3159 aa28.28■■■□□ 2.12
COLCA2-203ENST00000528846 ITSN1Q15811 1721 aa28.26■■■□□ 2.11
COLCA2-203ENST00000528846 ZC3H6P61129 1189 aaKnown RBP28.25■■■□□ 2.11
COLCA2-203ENST00000528846 CHRNA2Q15822 529 aa28.25■■■□□ 2.11
COLCA2-203ENST00000528846 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
COLCA2-203ENST00000528846 KIAA0232Q92628 1395 aa28.24■■■□□ 2.11
COLCA2-203ENST00000528846 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
COLCA2-203ENST00000528846 BLMP54132 1417 aaPredicted RBP28.23■■■□□ 2.11
COLCA2-203ENST00000528846 PPIP5K1Q6PFW1 1433 aa28.23■■■□□ 2.11
COLCA2-203ENST00000528846 SPATA31A5Q5VU36 1347 aa28.22■■■□□ 2.11
COLCA2-203ENST00000528846 SPATA31A7Q8IWB4 1347 aa28.22■■■□□ 2.11
COLCA2-203ENST00000528846 COL14A1Q05707 1796 aaKnown RBP28.22■■■□□ 2.11
COLCA2-203ENST00000528846 SF3B2Q13435 895 aaKnown RBP28.22■■■□□ 2.11
COLCA2-203ENST00000528846 CABP1Q9NZU7 370 aa28.2■■■□□ 2.1
COLCA2-203ENST00000528846 STRN4Q9NRL3 753 aa28.19■■■□□ 2.1
COLCA2-203ENST00000528846 DEFB132Q7Z7B7 95 aa28.18■■■□□ 2.1
COLCA2-203ENST00000528846 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
COLCA2-203ENST00000528846 TOPAZ1Q8N9V7 1692 aa28.18■■■□□ 2.1
COLCA2-203ENST00000528846 NRAPQ86VF7 1730 aa28.18■■■□□ 2.1
COLCA2-203ENST00000528846 NLRP13Q86W25 1043 aa28.17■■■□□ 2.1
COLCA2-203ENST00000528846 EVC2Q86UK5 1308 aa28.17■■■□□ 2.1
COLCA2-203ENST00000528846 CRYBG1Q9Y4K1 1723 aa28.16■■■□□ 2.1
COLCA2-203ENST00000528846 EVA1CP58658 441 aa28.15■■■□□ 2.1
COLCA2-203ENST00000528846 BRWD3Q6RI45 1802 aa28.15■■■□□ 2.1
COLCA2-203ENST00000528846 SPATA31A1Q5TZJ5 1347 aa28.14■■■□□ 2.09
COLCA2-203ENST00000528846 USP19O94966 1318 aa28.13■■■□□ 2.09
COLCA2-203ENST00000528846 GCP02774 474 aa28.12■■■□□ 2.09
COLCA2-203ENST00000528846 FAM182BQ5T319 152 aa28.11■■■□□ 2.09
COLCA2-203ENST00000528846 USP35Q9P2H5 1018 aa28.11■■■□□ 2.09
COLCA2-203ENST00000528846 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
COLCA2-203ENST00000528846 QRICH2Q9H0J4 1663 aa28.1■■■□□ 2.09
COLCA2-203ENST00000528846 NLRP6P59044 892 aa28.09■■■□□ 2.09
COLCA2-203ENST00000528846 TRPM1Q7Z4N2 1603 aa28.09■■■□□ 2.09
COLCA2-203ENST00000528846 PHRF1Q9P1Y6 1649 aaKnown RBP28.09■■■□□ 2.09
COLCA2-203ENST00000528846 CPDO75976 1380 aa28.08■■■□□ 2.09
COLCA2-203ENST00000528846 USP6P35125 1406 aa28.08■■■□□ 2.09
COLCA2-203ENST00000528846 BAG6P46379 1132 aa28.06■■■□□ 2.08
COLCA2-203ENST00000528846 LARP1Q6PKG0 1096 aaKnown RBP28.06■■■□□ 2.08
COLCA2-203ENST00000528846 SSH2Q76I76 1423 aa28.04■■■□□ 2.08
COLCA2-203ENST00000528846 ZBTB7CA1YPR0 619 aa28.04■■■□□ 2.08
COLCA2-203ENST00000528846 ZNF692Q9BU19 519 aaPredicted RBP28.04■■■□□ 2.08
COLCA2-203ENST00000528846 NRKQ7Z2Y5 1582 aa28.03■■■□□ 2.08
COLCA2-203ENST00000528846 CARD11Q9BXL7 1154 aa28.03■■■□□ 2.08
COLCA2-203ENST00000528846 CAMTA1Q9Y6Y1 1673 aa28.03■■■□□ 2.08
COLCA2-203ENST00000528846 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
COLCA2-203ENST00000528846 SRCAPQ6ZRS2 3230 aa28.01■■■□□ 2.08
COLCA2-203ENST00000528846 TCP11L2Q8N4U5 519 aa28.01■■■□□ 2.07
COLCA2-203ENST00000528846 TONSLQ96HA7 1378 aa27.99■■■□□ 2.07
COLCA2-203ENST00000528846 THSD7AQ9UPZ6 1657 aa27.99■■■□□ 2.07
COLCA2-203ENST00000528846 TTC21BQ7Z4L5 1316 aa27.98■■■□□ 2.07
COLCA2-203ENST00000528846 EN1Q05925 392 aaPredicted RBP27.98■■■□□ 2.07
COLCA2-203ENST00000528846 PDE3BQ13370 1112 aa27.98■■■□□ 2.07
COLCA2-203ENST00000528846 FAM196AQ6ZSG2 479 aa27.98■■■□□ 2.07
COLCA2-203ENST00000528846 THRAP3Q9Y2W1 955 aaKnown RBP27.96■■■□□ 2.07
COLCA2-203ENST00000528846 TRIM37O94972 964 aa27.95■■■□□ 2.06
COLCA2-203ENST00000528846 AATKQ6ZMQ8 1374 aa27.94■■■□□ 2.06
COLCA2-203ENST00000528846 COL5A2P05997 1499 aaPredicted RBP27.93■■■□□ 2.06
COLCA2-203ENST00000528846 LMO7Q8WWI1 1683 aa27.93■■■□□ 2.06
COLCA2-203ENST00000528846 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
COLCA2-203ENST00000528846 SOX12O15370 315 aa27.92■■■□□ 2.06
COLCA2-203ENST00000528846 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
COLCA2-203ENST00000528846 SBNO2Q9Y2G9 1366 aa27.91■■■□□ 2.06
COLCA2-203ENST00000528846 KCNH5Q8NCM2 988 aa27.91■■■□□ 2.06
COLCA2-203ENST00000528846 SLIT3O75094 1523 aa27.91■■■□□ 2.06
COLCA2-203ENST00000528846 CPSF1Q10570 1443 aaKnown RBP27.91■■■□□ 2.06
COLCA2-203ENST00000528846 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
COLCA2-203ENST00000528846 TOM1L2Q6ZVM7 507 aa27.89■■■□□ 2.06
COLCA2-203ENST00000528846 ARHGEF25Q86VW2 580 aa27.89■■■□□ 2.06
COLCA2-203ENST00000528846 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
COLCA2-203ENST00000528846 AXIN2Q9Y2T1 843 aa27.89■■■□□ 2.06
COLCA2-203ENST00000528846 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
COLCA2-203ENST00000528846 CRB1P82279 1406 aa27.88■■■□□ 2.05
COLCA2-203ENST00000528846 APBA3O96018 575 aa27.87■■■□□ 2.05
COLCA2-203ENST00000528846 EZH2Q15910 746 aaKnown RBP27.87■■■□□ 2.05
COLCA2-203ENST00000528846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.87■■■□□ 2.05
COLCA2-203ENST00000528846 CCER1Q8TC90 406 aaPredicted RBP27.87■■■□□ 2.05
COLCA2-203ENST00000528846 PIK3C2AO00443 1686 aa27.87■■■□□ 2.05
COLCA2-203ENST00000528846 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
COLCA2-203ENST00000528846 CAMKK2Q96RR4 588 aa27.84■■■□□ 2.05
COLCA2-203ENST00000528846 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
COLCA2-203ENST00000528846 HDGFL2Q7Z4V5 671 aaPredicted RBP27.83■■■□□ 2.05
COLCA2-203ENST00000528846 RGPD1P0DJD0 1748 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms