RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 COL3A1P02461 1466 aaPredicted RBP24.09■■□□□ 1.45
TM9SF1-206ENST00000528669 DZIP1LQ8IYY4 767 aaKnown RBP24.09■■□□□ 1.45
TM9SF1-206ENST00000528669 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
TM9SF1-206ENST00000528669 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
TM9SF1-206ENST00000528669 CD163L1Q9NR16 1453 aa24.08■■□□□ 1.45
TM9SF1-206ENST00000528669 FRAT2O75474 233 aaPredicted RBP24.08■■□□□ 1.44
TM9SF1-206ENST00000528669 GSE1Q14687 1217 aa24.08■■□□□ 1.44
TM9SF1-206ENST00000528669 NLRP1Q9C000 1473 aa24.06■■□□□ 1.44
TM9SF1-206ENST00000528669 IL27Q8NEV9 243 aa24.05■■□□□ 1.44
TM9SF1-206ENST00000528669 SSH1Q8WYL5 1049 aa24.05■■□□□ 1.44
TM9SF1-206ENST00000528669 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
TM9SF1-206ENST00000528669 RIPK4P57078 832 aa24.04■■□□□ 1.44
TM9SF1-206ENST00000528669 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
TM9SF1-206ENST00000528669 TRIM27P14373 513 aa24.04■■□□□ 1.44
TM9SF1-206ENST00000528669 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
TM9SF1-206ENST00000528669 CT47B1P0C2W7 299 aaPredicted RBP24.03■■□□□ 1.44
TM9SF1-206ENST00000528669 DIAPH1O60610 1272 aaKnown RBP24.03■■□□□ 1.44
TM9SF1-206ENST00000528669 HDGFL2Q7Z4V5 671 aaPredicted RBP24.03■■□□□ 1.44
TM9SF1-206ENST00000528669 STAG3Q9UJ98 1225 aa24.02■■□□□ 1.44
TM9SF1-206ENST00000528669 FBLN1P23142 703 aa24.02■■□□□ 1.44
TM9SF1-206ENST00000528669 CLTCQ00610 1675 aaKnown RBP24.01■■□□□ 1.43
TM9SF1-206ENST00000528669 ITPRIPQ8IWB1 547 aa24.01■■□□□ 1.43
TM9SF1-206ENST00000528669 NOB1Q9ULX3 412 aaKnown RBP24.01■■□□□ 1.43
TM9SF1-206ENST00000528669 ALKQ9UM73 1620 aa24■■□□□ 1.43
TM9SF1-206ENST00000528669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24■■□□□ 1.43
TM9SF1-206ENST00000528669 MED14O60244 1454 aa23.99■■□□□ 1.43
TM9SF1-206ENST00000528669 BECN1Q14457 450 aa23.99■■□□□ 1.43
TM9SF1-206ENST00000528669 ATF7IPQ6VMQ6 1270 aa23.99■■□□□ 1.43
TM9SF1-206ENST00000528669 UPF2Q9HAU5 1272 aaKnown RBP23.99■■□□□ 1.43
TM9SF1-206ENST00000528669 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
TM9SF1-206ENST00000528669 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
TM9SF1-206ENST00000528669 ARHGEF40Q8TER5 1519 aa23.97■■□□□ 1.43
TM9SF1-206ENST00000528669 TBC1D32Q96NH3 1257 aa23.96■■□□□ 1.43
TM9SF1-206ENST00000528669 IL16Q14005 1332 aa23.96■■□□□ 1.43
TM9SF1-206ENST00000528669 ZMYM3Q14202 1370 aa23.96■■□□□ 1.43
TM9SF1-206ENST00000528669 TMEM57Q8N5G2 664 aa23.95■■□□□ 1.43
TM9SF1-206ENST00000528669 DDX19BQ9UMR2 479 aa23.95■■□□□ 1.43
TM9SF1-206ENST00000528669 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.43
TM9SF1-206ENST00000528669 PNPLA6Q8IY17 1366 aa23.95■■□□□ 1.42
TM9SF1-206ENST00000528669 RTN4Q9NQC3 1192 aaKnown RBP23.94■■□□□ 1.42
TM9SF1-206ENST00000528669 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
TM9SF1-206ENST00000528669 HDAC1Q13547 482 aaPredicted RBP23.92■■□□□ 1.42
TM9SF1-206ENST00000528669 PNNQ9H307 717 aaKnown RBP23.92■■□□□ 1.42
TM9SF1-206ENST00000528669 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
TM9SF1-206ENST00000528669 POLKQ9UBT6 870 aa23.91■■□□□ 1.42
TM9SF1-206ENST00000528669 FCHSD2O94868 740 aa23.9■■□□□ 1.42
TM9SF1-206ENST00000528669 BRPF3Q9ULD4 1205 aa23.9■■□□□ 1.42
TM9SF1-206ENST00000528669 HMOX1P09601 288 aa23.9■■□□□ 1.42
TM9SF1-206ENST00000528669 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
TM9SF1-206ENST00000528669 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
TM9SF1-206ENST00000528669 TBC1D2Q9BYX2 928 aa23.89■■□□□ 1.42
TM9SF1-206ENST00000528669 KIF16BQ96L93 1317 aa23.88■■□□□ 1.41
TM9SF1-206ENST00000528669 ZBTB40Q9NUA8 1239 aa23.88■■□□□ 1.41
TM9SF1-206ENST00000528669 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
TM9SF1-206ENST00000528669 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
TM9SF1-206ENST00000528669 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
TM9SF1-206ENST00000528669 MFAP1P55081 439 aaKnown RBP23.86■■□□□ 1.41
TM9SF1-206ENST00000528669 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
TM9SF1-206ENST00000528669 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
TM9SF1-206ENST00000528669 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
TM9SF1-206ENST00000528669 SMC5Q8IY18 1101 aa23.85■■□□□ 1.41
TM9SF1-206ENST00000528669 SPRYD3Q8NCJ5 442 aa23.85■■□□□ 1.41
TM9SF1-206ENST00000528669 ANTXR1Q9H6X2 564 aa23.85■■□□□ 1.41
TM9SF1-206ENST00000528669 EMILIN1Q9Y6C2 1016 aa23.85■■□□□ 1.41
TM9SF1-206ENST00000528669 MLECQ14165 292 aa23.84■■□□□ 1.41
TM9SF1-206ENST00000528669 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
TM9SF1-206ENST00000528669 ALDH1L2Q3SY69 923 aa23.84■■□□□ 1.41
TM9SF1-206ENST00000528669 ZRANB1Q9UGI0 708 aa23.83■■□□□ 1.41
TM9SF1-206ENST00000528669 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
TM9SF1-206ENST00000528669 C22orf23Q9BZE7 217 aa23.83■■□□□ 1.41
TM9SF1-206ENST00000528669 RIMS2Q9UQ26 1411 aa23.83■■□□□ 1.4
TM9SF1-206ENST00000528669 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
TM9SF1-206ENST00000528669 ATP7BP35670 1465 aa23.82■■□□□ 1.4
TM9SF1-206ENST00000528669 NME9Q86XW9 330 aa23.82■■□□□ 1.4
TM9SF1-206ENST00000528669 NFE2L2Q16236 605 aa23.81■■□□□ 1.4
TM9SF1-206ENST00000528669 DLC1Q96QB1 1528 aa23.8■■□□□ 1.4
TM9SF1-206ENST00000528669 ELL2O00472 640 aaPredicted RBP23.8■■□□□ 1.4
TM9SF1-206ENST00000528669 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
TM9SF1-206ENST00000528669 LNPKQ9C0E8 428 aa23.8■■□□□ 1.4
TM9SF1-206ENST00000528669 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
TM9SF1-206ENST00000528669 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
TM9SF1-206ENST00000528669 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
TM9SF1-206ENST00000528669 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
TM9SF1-206ENST00000528669 NCKAP5LQ9HCH0 1330 aa23.78■■□□□ 1.4
TM9SF1-206ENST00000528669 VAMP4O75379 141 aa23.78■■□□□ 1.4
TM9SF1-206ENST00000528669 PPIP5K1Q6PFW1 1433 aa23.78■■□□□ 1.4
TM9SF1-206ENST00000528669 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
TM9SF1-206ENST00000528669 IL13P35225 146 aa23.77■■□□□ 1.4
TM9SF1-206ENST00000528669 NUCB1Q02818 461 aa23.77■■□□□ 1.4
TM9SF1-206ENST00000528669 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
TM9SF1-206ENST00000528669 C1orf115Q9H7X2 142 aa23.76■■□□□ 1.39
TM9SF1-206ENST00000528669 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
TM9SF1-206ENST00000528669 RRS1Q15050 365 aaKnown RBP23.75■■□□□ 1.39
TM9SF1-206ENST00000528669 METP08581 1390 aa23.74■■□□□ 1.39
TM9SF1-206ENST00000528669 CPSF1Q10570 1443 aaKnown RBP23.74■■□□□ 1.39
TM9SF1-206ENST00000528669 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
TM9SF1-206ENST00000528669 EDC4Q6P2E9 1401 aaKnown RBP23.74■■□□□ 1.39
TM9SF1-206ENST00000528669 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
TM9SF1-206ENST00000528669 CHD1LQ86WJ1 897 aa23.73■■□□□ 1.39
TM9SF1-206ENST00000528669 ZBTB7BO15156 539 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms