RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
SORL1-205ENST00000527649 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
SORL1-205ENST00000527649 NSD2O96028 1365 aa18.4■□□□□ 0.54
SORL1-205ENST00000527649 ZRANB1Q9UGI0 708 aa18.4■□□□□ 0.54
SORL1-205ENST00000527649 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
SORL1-205ENST00000527649 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
SORL1-205ENST00000527649 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
SORL1-205ENST00000527649 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
SORL1-205ENST00000527649 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
SORL1-205ENST00000527649 KIF1AQ12756 1690 aa18.39■□□□□ 0.53
SORL1-205ENST00000527649 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
SORL1-205ENST00000527649 BRINP3Q76B58 766 aa18.38■□□□□ 0.53
SORL1-205ENST00000527649 PSME1Q06323 249 aa18.37■□□□□ 0.53
SORL1-205ENST00000527649 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
SORL1-205ENST00000527649 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
SORL1-205ENST00000527649 PAK3O75914 559 aaPredicted RBP18.35■□□□□ 0.53
SORL1-205ENST00000527649 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
SORL1-205ENST00000527649 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
SORL1-205ENST00000527649 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
SORL1-205ENST00000527649 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
SORL1-205ENST00000527649 FBLN1P23142 703 aa18.33■□□□□ 0.53
SORL1-205ENST00000527649 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.53
SORL1-205ENST00000527649 NUTM2GQ5VZR2 741 aa18.32■□□□□ 0.52
SORL1-205ENST00000527649 COG3Q96JB2 828 aa18.32■□□□□ 0.52
SORL1-205ENST00000527649 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
SORL1-205ENST00000527649 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
SORL1-205ENST00000527649 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
SORL1-205ENST00000527649 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
SORL1-205ENST00000527649 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
SORL1-205ENST00000527649 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
SORL1-205ENST00000527649 PXDNQ92626 1479 aa18.3■□□□□ 0.52
SORL1-205ENST00000527649 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
SORL1-205ENST00000527649 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
SORL1-205ENST00000527649 NLRP6P59044 892 aa18.29■□□□□ 0.52
SORL1-205ENST00000527649 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
SORL1-205ENST00000527649 MTHFSP49914 203 aa18.27■□□□□ 0.51
SORL1-205ENST00000527649 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.51
SORL1-205ENST00000527649 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
SORL1-205ENST00000527649 SOX12O15370 315 aa18.26■□□□□ 0.51
SORL1-205ENST00000527649 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
SORL1-205ENST00000527649 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
SORL1-205ENST00000527649 NHSL1Q5SYE7 1610 aa18.25■□□□□ 0.51
SORL1-205ENST00000527649 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
SORL1-205ENST00000527649 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
SORL1-205ENST00000527649 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
SORL1-205ENST00000527649 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
SORL1-205ENST00000527649 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
SORL1-205ENST00000527649 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
SORL1-205ENST00000527649 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
SORL1-205ENST00000527649 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
SORL1-205ENST00000527649 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
SORL1-205ENST00000527649 TOM1O60784 492 aa18.23■□□□□ 0.51
SORL1-205ENST00000527649 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
SORL1-205ENST00000527649 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
SORL1-205ENST00000527649 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
SORL1-205ENST00000527649 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
SORL1-205ENST00000527649 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
SORL1-205ENST00000527649 UBAP1LF5GYI3 381 aa18.22■□□□□ 0.51
SORL1-205ENST00000527649 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
SORL1-205ENST00000527649 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
SORL1-205ENST00000527649 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
SORL1-205ENST00000527649 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
SORL1-205ENST00000527649 USP19O94966 1318 aa18.19■□□□□ 0.5
SORL1-205ENST00000527649 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
SORL1-205ENST00000527649 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
SORL1-205ENST00000527649 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
SORL1-205ENST00000527649 SLIT3O75094 1523 aa18.18■□□□□ 0.5
SORL1-205ENST00000527649 NFAT5O94916 1531 aa18.18■□□□□ 0.5
SORL1-205ENST00000527649 MAP3K19Q56UN5 1328 aa18.18■□□□□ 0.5
SORL1-205ENST00000527649 PNPLA6Q8IY17 1366 aa18.18■□□□□ 0.5
SORL1-205ENST00000527649 PEAK1Q9H792 1746 aa18.17■□□□□ 0.5
SORL1-205ENST00000527649 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
SORL1-205ENST00000527649 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
SORL1-205ENST00000527649 GCP02774 474 aa18.16■□□□□ 0.5
SORL1-205ENST00000527649 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
SORL1-205ENST00000527649 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
SORL1-205ENST00000527649 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
SORL1-205ENST00000527649 KCNH5Q8NCM2 988 aa18.14■□□□□ 0.49
SORL1-205ENST00000527649 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
SORL1-205ENST00000527649 INSRP06213 1382 aa18.14■□□□□ 0.49
SORL1-205ENST00000527649 CRYBG1Q9Y4K1 1723 aa18.14■□□□□ 0.49
SORL1-205ENST00000527649 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
SORL1-205ENST00000527649 LTN1O94822 1766 aa18.13■□□□□ 0.49
SORL1-205ENST00000527649 PHLPP1O60346 1717 aa18.13■□□□□ 0.49
SORL1-205ENST00000527649 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
SORL1-205ENST00000527649 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
SORL1-205ENST00000527649 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
SORL1-205ENST00000527649 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
SORL1-205ENST00000527649 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
SORL1-205ENST00000527649 AMPHP49418 695 aa18.11■□□□□ 0.49
SORL1-205ENST00000527649 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
SORL1-205ENST00000527649 FLT4P35916 1363 aa18.1■□□□□ 0.49
SORL1-205ENST00000527649 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
SORL1-205ENST00000527649 ARHGEF25Q86VW2 580 aa18.1■□□□□ 0.49
SORL1-205ENST00000527649 HOXC9P31274 260 aa18.09■□□□□ 0.49
SORL1-205ENST00000527649 MYT1Q01538 1121 aa18.09■□□□□ 0.49
SORL1-205ENST00000527649 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
SORL1-205ENST00000527649 IL13P35225 146 aa18.09■□□□□ 0.49
SORL1-205ENST00000527649 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.48
SORL1-205ENST00000527649 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms