RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
CAPN1-208ENST00000527323 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
CAPN1-208ENST00000527323 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
CAPN1-208ENST00000527323 CDK19Q9BWU1 502 aa15.91■□□□□ 0.14
CAPN1-208ENST00000527323 PODXL2Q9NZ53 605 aa15.91■□□□□ 0.14
CAPN1-208ENST00000527323 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-208ENST00000527323 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
CAPN1-208ENST00000527323 RLBP1P12271 317 aa15.9■□□□□ 0.14
CAPN1-208ENST00000527323 IQGAP1P46940 1657 aa15.9■□□□□ 0.14
CAPN1-208ENST00000527323 MYOM2P54296 1465 aa15.9■□□□□ 0.14
CAPN1-208ENST00000527323 TMEM2Q9UHN6 1383 aa15.89■□□□□ 0.13
CAPN1-208ENST00000527323 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
CAPN1-208ENST00000527323 RIMS1Q86UR5 1692 aaKnown RBP15.89■□□□□ 0.13
CAPN1-208ENST00000527323 POLR3AO14802 1390 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-208ENST00000527323 FAM43AQ8N2R8 423 aa15.88■□□□□ 0.13
CAPN1-208ENST00000527323 GGNBP2Q9H3C7 697 aa15.88■□□□□ 0.13
CAPN1-208ENST00000527323 YTHDC2Q9H6S0 1430 aaKnown RBP15.88■□□□□ 0.13
CAPN1-208ENST00000527323 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 FER1L4A9Z1Z3 1794 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 SPATA31D1Q6ZQQ2 1576 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 MTHFSP49914 203 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-208ENST00000527323 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 IFT172Q9UG01 1749 aa15.87■□□□□ 0.13
CAPN1-208ENST00000527323 AAMPQ13685 434 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
CAPN1-208ENST00000527323 TBC1D2Q9BYX2 928 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 PTPRMP28827 1452 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 C3P01024 1663 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 TBC1D32Q96NH3 1257 aa15.86■□□□□ 0.13
CAPN1-208ENST00000527323 L1TD1Q5T7N2 865 aaKnown RBP15.86■□□□□ 0.13
CAPN1-208ENST00000527323 NRXN1Q9ULB1 1477 aa15.85■□□□□ 0.13
CAPN1-208ENST00000527323 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
CAPN1-208ENST00000527323 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
CAPN1-208ENST00000527323 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-208ENST00000527323 KCNA6P17658 529 aa15.85■□□□□ 0.13
CAPN1-208ENST00000527323 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.13
CAPN1-208ENST00000527323 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
CAPN1-208ENST00000527323 ALKQ9UM73 1620 aa15.84■□□□□ 0.13
CAPN1-208ENST00000527323 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
CAPN1-208ENST00000527323 C14orf37Q86TY3 774 aa15.84■□□□□ 0.13
CAPN1-208ENST00000527323 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.83■□□□□ 0.13
CAPN1-208ENST00000527323 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.13
CAPN1-208ENST00000527323 ANTXR1Q9H6X2 564 aa15.83■□□□□ 0.12
CAPN1-208ENST00000527323 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
CAPN1-208ENST00000527323 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
CAPN1-208ENST00000527323 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
CAPN1-208ENST00000527323 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
CAPN1-208ENST00000527323 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
CAPN1-208ENST00000527323 MYOM1P52179 1685 aa15.82■□□□□ 0.12
CAPN1-208ENST00000527323 HDGFP51858 240 aaKnown RBP15.81■□□□□ 0.12
CAPN1-208ENST00000527323 MVPQ14764 893 aaKnown RBP15.81■□□□□ 0.12
CAPN1-208ENST00000527323 DZIP1LQ8IYY4 767 aaKnown RBP15.81■□□□□ 0.12
CAPN1-208ENST00000527323 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
CAPN1-208ENST00000527323 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
CAPN1-208ENST00000527323 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-208ENST00000527323 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
CAPN1-208ENST00000527323 SMC4Q9NTJ3 1288 aa15.79■□□□□ 0.12
CAPN1-208ENST00000527323 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
CAPN1-208ENST00000527323 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
CAPN1-208ENST00000527323 GOLGA6L3A6NEY3 463 aa15.79■□□□□ 0.12
CAPN1-208ENST00000527323 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
CAPN1-208ENST00000527323 ITPRIPQ8IWB1 547 aa15.78■□□□□ 0.12
CAPN1-208ENST00000527323 MCM4P33991 863 aa15.78■□□□□ 0.12
CAPN1-208ENST00000527323 QRICH2Q9H0J4 1663 aa15.77■□□□□ 0.12
CAPN1-208ENST00000527323 CCDC27Q2M243 656 aa15.77■□□□□ 0.11
CAPN1-208ENST00000527323 NLRP1Q9C000 1473 aa15.77■□□□□ 0.11
CAPN1-208ENST00000527323 NUDT16Q96DE0 195 aaKnown RBP15.76■□□□□ 0.11
CAPN1-208ENST00000527323 PTPRUQ92729 1446 aa15.76■□□□□ 0.11
CAPN1-208ENST00000527323 ADAMTS13Q76LX8 1427 aa15.76■□□□□ 0.11
CAPN1-208ENST00000527323 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
CAPN1-208ENST00000527323 EXOSC9Q06265 439 aaKnown RBP15.76■□□□□ 0.11
CAPN1-208ENST00000527323 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
CAPN1-208ENST00000527323 TULP4Q9NRJ4 1543 aa15.76■□□□□ 0.11
CAPN1-208ENST00000527323 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-208ENST00000527323 PRR36Q9H6K5 1346 aa15.75■□□□□ 0.11
CAPN1-208ENST00000527323 NME9Q86XW9 330 aa15.75■□□□□ 0.11
CAPN1-208ENST00000527323 RRAGDQ9NQL2 400 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-208ENST00000527323 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
CAPN1-208ENST00000527323 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
CAPN1-208ENST00000527323 XRCC6P12956 609 aaKnown RBP eCLIP15.74■□□□□ 0.11
CAPN1-208ENST00000527323 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
CAPN1-208ENST00000527323 ZBTB7CA1YPR0 619 aa15.73■□□□□ 0.11
CAPN1-208ENST00000527323 TRAK2O60296 914 aa15.73■□□□□ 0.11
CAPN1-208ENST00000527323 TRIM27P14373 513 aa15.72■□□□□ 0.11
CAPN1-208ENST00000527323 DDX19BQ9UMR2 479 aa15.72■□□□□ 0.11
CAPN1-208ENST00000527323 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
CAPN1-208ENST00000527323 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
CAPN1-208ENST00000527323 SSH1Q8WYL5 1049 aa15.72■□□□□ 0.11
CAPN1-208ENST00000527323 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
CAPN1-208ENST00000527323 NOB1Q9ULX3 412 aaKnown RBP15.71■□□□□ 0.11
CAPN1-208ENST00000527323 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
CAPN1-208ENST00000527323 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.1
CAPN1-208ENST00000527323 RRS1Q15050 365 aaKnown RBP15.7■□□□□ 0.1
CAPN1-208ENST00000527323 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
CAPN1-208ENST00000527323 PANK2Q9BZ23 570 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms