RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
CLNS1A-209ENST00000527299 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
CLNS1A-209ENST00000527299 NDUFV2P19404 249 aa7.66□□□□□ -1.18
CLNS1A-209ENST00000527299 SSTR3P32745 418 aaPredicted RBP7.66□□□□□ -1.18
CLNS1A-209ENST00000527299 WDR4P57081 412 aaKnown RBP7.66□□□□□ -1.18
CLNS1A-209ENST00000527299 KRI1Q8N9T8 703 aaKnown RBP7.66□□□□□ -1.18
CLNS1A-209ENST00000527299 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
CLNS1A-209ENST00000527299 SOBPA7XYQ1 873 aa7.65□□□□□ -1.18
CLNS1A-209ENST00000527299 MOXD2PA6NHM9 499 aa7.64□□□□□ -1.19
CLNS1A-209ENST00000527299 SPDYE5A6NIY4 337 aa7.64□□□□□ -1.19
CLNS1A-209ENST00000527299 MTMR2Q13614 643 aa7.64□□□□□ -1.19
CLNS1A-209ENST00000527299 CDK15Q96Q40 435 aa7.64□□□□□ -1.19
CLNS1A-209ENST00000527299 FAM174AQ8TBP5 190 aa7.63□□□□□ -1.19
CLNS1A-209ENST00000527299 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
CLNS1A-209ENST00000527299 GSK3AP49840 483 aa7.6□□□□□ -1.19
CLNS1A-209ENST00000527299 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
CLNS1A-209ENST00000527299 ITPKCQ96DU7 683 aa7.6□□□□□ -1.19
CLNS1A-209ENST00000527299 ZFAND3Q9H8U3 227 aa7.6□□□□□ -1.19
CLNS1A-209ENST00000527299 MAN1A2O60476 641 aa7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 ZIC2O95409 532 aaPredicted RBP7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 CTHP32929 405 aa7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 GJA5P36382 358 aa7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 HAP1P54257 671 aaPredicted RBP7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 FOXJ1Q92949 421 aa7.59□□□□□ -1.19
CLNS1A-209ENST00000527299 PPFIA3O75145 1194 aa7.58□□□□□ -1.2
CLNS1A-209ENST00000527299 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
CLNS1A-209ENST00000527299 NR5A1Q13285 461 aa7.58□□□□□ -1.2
CLNS1A-209ENST00000527299 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-209ENST00000527299 NR3C2P08235 984 aa7.57□□□□□ -1.2
CLNS1A-209ENST00000527299 GRM5P41594 1212 aa7.57□□□□□ -1.2
CLNS1A-209ENST00000527299 AMHR2Q16671 573 aa7.57□□□□□ -1.2
CLNS1A-209ENST00000527299 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
CLNS1A-209ENST00000527299 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 MAP10Q9P2G4 905 aa7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 PCDHB15Q9Y5E8 787 aa7.56□□□□□ -1.2
CLNS1A-209ENST00000527299 TTLL12Q14166 644 aaPredicted RBP7.55□□□□□ -1.2
CLNS1A-209ENST00000527299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLNS1A-209ENST00000527299 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
CLNS1A-209ENST00000527299 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
CLNS1A-209ENST00000527299 TBC1D2Q9BYX2 928 aa7.55□□□□□ -1.2
CLNS1A-209ENST00000527299 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
CLNS1A-209ENST00000527299 BMP2P12643 396 aa7.54□□□□□ -1.2
CLNS1A-209ENST00000527299 GIGYF2Q6Y7W6 1299 aaKnown RBP7.54□□□□□ -1.2
CLNS1A-209ENST00000527299 MEIOBQ8N635 442 aa7.54□□□□□ -1.2
CLNS1A-209ENST00000527299 SPTLC1O15269 473 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 UPP2O95045 317 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 HRCP23327 699 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 BARGINQ6ZT62 677 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 KCTD17Q8N5Z5 321 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
CLNS1A-209ENST00000527299 KRT76Q01546 638 aa7.52□□□□□ -1.21
CLNS1A-209ENST00000527299 BPHLQ86WA6 291 aaPredicted RBP7.52□□□□□ -1.21
CLNS1A-209ENST00000527299 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
CLNS1A-209ENST00000527299 AGERQ15109 404 aa7.51□□□□□ -1.21
CLNS1A-209ENST00000527299 PRPF38BQ5VTL8 546 aaKnown RBP7.51□□□□□ -1.21
CLNS1A-209ENST00000527299 GPR161Q8N6U8 529 aaKnown RBP7.51□□□□□ -1.21
CLNS1A-209ENST00000527299 C1QTNF2Q9BXJ5 285 aa7.51□□□□□ -1.21
CLNS1A-209ENST00000527299 SH3RF1Q7Z6J0 888 aa7.5□□□□□ -1.21
CLNS1A-209ENST00000527299 PER1O15534 1290 aaPredicted RBP7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 ZMYND10O75800 440 aa7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 RASSF7Q02833 373 aa7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 TMEM151AQ8N4L1 468 aa7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 ADAMTS8Q9UP79 889 aa7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
CLNS1A-209ENST00000527299 GDF11O95390 407 aa7.48□□□□□ -1.21
CLNS1A-209ENST00000527299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.48□□□□□ -1.215e-10■■□□□ 12.6
CLNS1A-209ENST00000527299 CNTNAP3BQ96NU0 1288 aa7.48□□□□□ -1.21
CLNS1A-209ENST00000527299 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
CLNS1A-209ENST00000527299 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
CLNS1A-209ENST00000527299 FSHRP23945 695 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 TRMT44Q8IYL2 757 aaKnown RBP7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 ARMC2Q8NEN0 867 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 CABLES1Q8TDN4 633 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 EMILIN1Q9Y6C2 1016 aa7.47□□□□□ -1.21
CLNS1A-209ENST00000527299 TTLL8A6PVC2 850 aa7.46□□□□□ -1.22
CLNS1A-209ENST00000527299 RNF225M0QZC1 329 aaPredicted RBP7.46□□□□□ -1.22
CLNS1A-209ENST00000527299 PTSQ03393 145 aa7.46□□□□□ -1.22
CLNS1A-209ENST00000527299 VASH1Q7L8A9 365 aaPredicted RBP7.46□□□□□ -1.22
CLNS1A-209ENST00000527299 SH3BP5LQ7L8J4 393 aa7.45□□□□□ -1.22
CLNS1A-209ENST00000527299 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
CLNS1A-209ENST00000527299 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
CLNS1A-209ENST00000527299 NBPF14Q5TI25 921 aa7.44□□□□□ -1.22
CLNS1A-209ENST00000527299 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
CLNS1A-209ENST00000527299 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
CLNS1A-209ENST00000527299 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
CLNS1A-209ENST00000527299 LILRB3O75022 631 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 QPCTQ16769 361 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 CSPP1Q1MSJ5 1256 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 RNFT1Q5M7Z0 435 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 Q6ZVU0 165 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-209ENST00000527299 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms