RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
USP35-201ENST00000526425 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 SYNMO15061 1565 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
USP35-201ENST00000526425 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
USP35-201ENST00000526425 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.41
USP35-201ENST00000526425 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
USP35-201ENST00000526425 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
USP35-201ENST00000526425 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
USP35-201ENST00000526425 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
USP35-201ENST00000526425 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
USP35-201ENST00000526425 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
USP35-201ENST00000526425 RIPK4P57078 832 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 A2ML1A8K2U0 1454 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 LAMC1P11047 1609 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
USP35-201ENST00000526425 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
USP35-201ENST00000526425 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 LTKP29376 864 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
USP35-201ENST00000526425 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
USP35-201ENST00000526425 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
USP35-201ENST00000526425 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
USP35-201ENST00000526425 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
USP35-201ENST00000526425 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
USP35-201ENST00000526425 NEXMIFQ5QGS0 1516 aa12.48□□□□□ -0.41
USP35-201ENST00000526425 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
USP35-201ENST00000526425 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
USP35-201ENST00000526425 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
USP35-201ENST00000526425 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
USP35-201ENST00000526425 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
USP35-201ENST00000526425 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
USP35-201ENST00000526425 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
USP35-201ENST00000526425 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
USP35-201ENST00000526425 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
USP35-201ENST00000526425 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
USP35-201ENST00000526425 NUDT16Q96DE0 195 aaKnown RBP12.46□□□□□ -0.41
USP35-201ENST00000526425 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
USP35-201ENST00000526425 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
USP35-201ENST00000526425 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
USP35-201ENST00000526425 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
USP35-201ENST00000526425 PRKAR2BP31323 418 aa12.46□□□□□ -0.42
USP35-201ENST00000526425 COG3Q96JB2 828 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 APBB1O00213 710 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 NME9Q86XW9 330 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 METP08581 1390 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
USP35-201ENST00000526425 SIGLEC1Q9BZZ2 1709 aa12.44□□□□□ -0.42
USP35-201ENST00000526425 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
USP35-201ENST00000526425 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
USP35-201ENST00000526425 POLR1AO95602 1720 aaPredicted RBP12.44□□□□□ -0.42
USP35-201ENST00000526425 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
USP35-201ENST00000526425 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
USP35-201ENST00000526425 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
USP35-201ENST00000526425 KDM5AP29375 1690 aaKnown RBP12.44□□□□□ -0.42
USP35-201ENST00000526425 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
USP35-201ENST00000526425 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
USP35-201ENST00000526425 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
USP35-201ENST00000526425 NLRP1Q9C000 1473 aa12.43□□□□□ -0.42
USP35-201ENST00000526425 IQGAP1P46940 1657 aa12.43□□□□□ -0.42
USP35-201ENST00000526425 FYB1O15117 783 aa12.43□□□□□ -0.42
USP35-201ENST00000526425 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
USP35-201ENST00000526425 TMEM131LA2VDJ0 1609 aa12.42□□□□□ -0.42
USP35-201ENST00000526425 A0A1W2PP64 1363 aa12.42□□□□□ -0.42
USP35-201ENST00000526425 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
USP35-201ENST00000526425 PPLO60437 1756 aa12.42□□□□□ -0.42
USP35-201ENST00000526425 ADGRB1O14514 1584 aa12.42□□□□□ -0.42
USP35-201ENST00000526425 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
USP35-201ENST00000526425 TBX22Q9Y458 520 aa12.41□□□□□ -0.42
USP35-201ENST00000526425 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
USP35-201ENST00000526425 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
USP35-201ENST00000526425 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
USP35-201ENST00000526425 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.42
USP35-201ENST00000526425 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.43
USP35-201ENST00000526425 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.43
USP35-201ENST00000526425 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
USP35-201ENST00000526425 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
USP35-201ENST00000526425 AMPHP49418 695 aa12.39□□□□□ -0.43
USP35-201ENST00000526425 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
USP35-201ENST00000526425 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
USP35-201ENST00000526425 PDCL3Q9H2J4 239 aa12.39□□□□□ -0.43
USP35-201ENST00000526425 NSD2O96028 1365 aa12.38□□□□□ -0.43
USP35-201ENST00000526425 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
USP35-201ENST00000526425 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
USP35-201ENST00000526425 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
USP35-201ENST00000526425 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
USP35-201ENST00000526425 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
USP35-201ENST00000526425 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms