RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
CCDC90B-206ENST00000526265 PBX2P40425 430 aa14.83□□□□□ -0.04
CCDC90B-206ENST00000526265 PDE4DQ08499 809 aa14.83□□□□□ -0.04
CCDC90B-206ENST00000526265 AMHR2Q16671 573 aa14.83□□□□□ -0.04
CCDC90B-206ENST00000526265 COL17A1Q9UMD9 1497 aaPredicted RBP14.82□□□□□ -0.04
CCDC90B-206ENST00000526265 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
CCDC90B-206ENST00000526265 ZNF687Q8N1G0 1237 aa14.82□□□□□ -0.04
CCDC90B-206ENST00000526265 ARHGAP33O14559 1287 aa14.81□□□□□ -0.04
CCDC90B-206ENST00000526265 OATP04181 439 aa14.81□□□□□ -0.04
CCDC90B-206ENST00000526265 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-206ENST00000526265 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-206ENST00000526265 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
CCDC90B-206ENST00000526265 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
CCDC90B-206ENST00000526265 REREQ9P2R6 1566 aa14.79□□□□□ -0.04
CCDC90B-206ENST00000526265 HS3ST6Q96QI5 342 aa14.79□□□□□ -0.04
CCDC90B-206ENST00000526265 A2MP01023 1474 aa14.79□□□□□ -0.04
CCDC90B-206ENST00000526265 DIP2CQ9Y2E4 1556 aa14.78□□□□□ -0.04
CCDC90B-206ENST00000526265 TRIM6-TRIM34B2RNG4 842 aa14.78□□□□□ -0.04
CCDC90B-206ENST00000526265 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
CCDC90B-206ENST00000526265 ATP10AO60312 1499 aa14.77□□□□□ -0.04
CCDC90B-206ENST00000526265 PSEN2P49810 448 aa14.77□□□□□ -0.04
CCDC90B-206ENST00000526265 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.04
CCDC90B-206ENST00000526265 FAM198AQ9UFP1 575 aa14.77□□□□□ -0.04
CCDC90B-206ENST00000526265 TSKSQ9UJT2 592 aa14.77□□□□□ -0.04
CCDC90B-206ENST00000526265 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.05
CCDC90B-206ENST00000526265 METTL3Q86U44 580 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-206ENST00000526265 ZBED2Q9BTP6 218 aa14.76□□□□□ -0.05
CCDC90B-206ENST00000526265 BCORL1Q5H9F3 1711 aa14.76□□□□□ -0.05
CCDC90B-206ENST00000526265 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
CCDC90B-206ENST00000526265 SLC4A5Q9BY07 1137 aa14.75□□□□□ -0.05
CCDC90B-206ENST00000526265 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
CCDC90B-206ENST00000526265 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
CCDC90B-206ENST00000526265 RBM46Q8TBY0 533 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-206ENST00000526265 POTEB3A0JP26 581 aa14.74□□□□□ -0.05
CCDC90B-206ENST00000526265 POTEBQ6S5H4 581 aa14.74□□□□□ -0.05
CCDC90B-206ENST00000526265 PACS2Q86VP3 889 aa14.74□□□□□ -0.05
CCDC90B-206ENST00000526265 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
CCDC90B-206ENST00000526265 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
CCDC90B-206ENST00000526265 PROX2Q3B8N5 592 aa14.73□□□□□ -0.05
CCDC90B-206ENST00000526265 GPBP1L1Q9HC44 474 aaPredicted RBP14.73□□□□□ -0.05
CCDC90B-206ENST00000526265 AXIN2Q9Y2T1 843 aa14.73□□□□□ -0.05
CCDC90B-206ENST00000526265 UNC13BO14795 1591 aa14.73□□□□□ -0.05
CCDC90B-206ENST00000526265 AGLP35573 1532 aa14.72□□□□□ -0.05
CCDC90B-206ENST00000526265 PARP9Q8IXQ6 854 aa14.72□□□□□ -0.05
CCDC90B-206ENST00000526265 PHOX2BQ99453 314 aa14.72□□□□□ -0.05
CCDC90B-206ENST00000526265 DEPDC5O75140 1603 aa14.71□□□□□ -0.05
CCDC90B-206ENST00000526265 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
CCDC90B-206ENST00000526265 KDM4CQ9H3R0 1056 aa14.71□□□□□ -0.05
CCDC90B-206ENST00000526265 KDM5DQ9BY66 1539 aa14.71□□□□□ -0.06
CCDC90B-206ENST00000526265 KANK1Q14678 1352 aa14.7□□□□□ -0.06
CCDC90B-206ENST00000526265 KIF3BO15066 747 aa14.7□□□□□ -0.06
CCDC90B-206ENST00000526265 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
CCDC90B-206ENST00000526265 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-206ENST00000526265 CLCN1P35523 988 aa14.69□□□□□ -0.06
CCDC90B-206ENST00000526265 DMRTA1Q5VZB9 504 aa14.69□□□□□ -0.06
CCDC90B-206ENST00000526265 EYA1Q99502 592 aa14.68□□□□□ -0.06
CCDC90B-206ENST00000526265 PRDM15P57071 1507 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-206ENST00000526265 NUP155O75694 1391 aa14.68□□□□□ -0.06
CCDC90B-206ENST00000526265 NUDT18Q6ZVK8 323 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 TATDN2Q93075 761 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 IQGAP3Q86VI3 1631 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 FAM135AQ9P2D6 1515 aa14.67□□□□□ -0.06
CCDC90B-206ENST00000526265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 TMEM132AQ24JP5 1023 aa14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 TMUB1Q9BVT8 246 aa14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 GPCPD1Q9NPB8 672 aa14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 RABGEF1Q9UJ41 708 aa14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 KIAA1468Q9P260 1216 aa14.66□□□□□ -0.06
CCDC90B-206ENST00000526265 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
CCDC90B-206ENST00000526265 DAXXQ9UER7 740 aaPredicted RBP14.65□□□□□ -0.06
CCDC90B-206ENST00000526265 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 C3orf80F5H4A9 247 aa14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 CCER1Q8TC90 406 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 MPHOSPH9Q99550 1183 aa14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 VPS9D1Q9Y2B5 631 aa14.64□□□□□ -0.07
CCDC90B-206ENST00000526265 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
CCDC90B-206ENST00000526265 TK2O00142 265 aa14.63□□□□□ -0.07
CCDC90B-206ENST00000526265 RCCD1A6NED2 376 aa14.62□□□□□ -0.07
CCDC90B-206ENST00000526265 GGT6Q6P531 493 aa14.62□□□□□ -0.07
CCDC90B-206ENST00000526265 PZPP20742 1482 aa14.62□□□□□ -0.07
CCDC90B-206ENST00000526265 LMTK2Q8IWU2 1503 aa14.62□□□□□ -0.07
CCDC90B-206ENST00000526265 DNAJB2P25686 324 aa14.61□□□□□ -0.07
CCDC90B-206ENST00000526265 REPIN1Q9BWE0 567 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-206ENST00000526265 TET3O43151 1660 aa14.61□□□□□ -0.07
CCDC90B-206ENST00000526265 LSM11P83369 360 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC90B-206ENST00000526265 ARID4BQ4LE39 1312 aaPredicted RBP14.6□□□□□ -0.07
CCDC90B-206ENST00000526265 WASHC2CQ9Y4E1 1318 aa14.59□□□□□ -0.07
CCDC90B-206ENST00000526265 NLRP7Q8WX94 980 aa14.59□□□□□ -0.07
CCDC90B-206ENST00000526265 SMAPO00193 183 aa14.58□□□□□ -0.07
CCDC90B-206ENST00000526265 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.07
CCDC90B-206ENST00000526265 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.08
CCDC90B-206ENST00000526265 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-206ENST00000526265 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-206ENST00000526265 CEP152O94986 1710 aa14.57□□□□□ -0.08
CCDC90B-206ENST00000526265 NBPF3Q9H094 633 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms