RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 FYB1O15117 783 aa19.62■□□□□ 0.73
COLCA2-202ENST00000526216 CADPS2Q86UW7 1296 aa19.62■□□□□ 0.73
COLCA2-202ENST00000526216 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
COLCA2-202ENST00000526216 TTC21BQ7Z4L5 1316 aa19.61■□□□□ 0.73
COLCA2-202ENST00000526216 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
COLCA2-202ENST00000526216 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
COLCA2-202ENST00000526216 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
COLCA2-202ENST00000526216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
COLCA2-202ENST00000526216 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
COLCA2-202ENST00000526216 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
COLCA2-202ENST00000526216 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
COLCA2-202ENST00000526216 NME9Q86XW9 330 aa19.59■□□□□ 0.73
COLCA2-202ENST00000526216 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.73
COLCA2-202ENST00000526216 MARF1Q9Y4F3 1742 aaKnown RBP19.57■□□□□ 0.72
COLCA2-202ENST00000526216 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
COLCA2-202ENST00000526216 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 USP54Q70EL1 1684 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
COLCA2-202ENST00000526216 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
COLCA2-202ENST00000526216 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
COLCA2-202ENST00000526216 FOXO3O43524 673 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 BRINP3Q76B58 766 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 DDX17Q92841 729 aaKnown RBP19.52■□□□□ 0.72
COLCA2-202ENST00000526216 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
COLCA2-202ENST00000526216 PXDNQ92626 1479 aa19.51■□□□□ 0.71
COLCA2-202ENST00000526216 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
COLCA2-202ENST00000526216 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
COLCA2-202ENST00000526216 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
COLCA2-202ENST00000526216 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 PSME1Q06323 249 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 FBLN1P23142 703 aa19.48■□□□□ 0.71
COLCA2-202ENST00000526216 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
COLCA2-202ENST00000526216 COG3Q96JB2 828 aa19.47■□□□□ 0.71
COLCA2-202ENST00000526216 ROBO1Q9Y6N7 1651 aa19.46■□□□□ 0.71
COLCA2-202ENST00000526216 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
COLCA2-202ENST00000526216 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
COLCA2-202ENST00000526216 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
COLCA2-202ENST00000526216 SLIT3O75094 1523 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 MTHFSP49914 203 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 NLRP6P59044 892 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
COLCA2-202ENST00000526216 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 NFAT5O94916 1531 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
COLCA2-202ENST00000526216 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 SOS2Q07890 1332 aaPredicted RBP19.41■□□□□ 0.7
COLCA2-202ENST00000526216 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
COLCA2-202ENST00000526216 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 EMILIN1Q9Y6C2 1016 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 USP19O94966 1318 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 SPATA31A3Q5VYP0 1347 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 PHRF1Q9P1Y6 1649 aaKnown RBP19.38■□□□□ 0.69
COLCA2-202ENST00000526216 PNPLA6Q8IY17 1366 aa19.38■□□□□ 0.69
COLCA2-202ENST00000526216 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
COLCA2-202ENST00000526216 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
COLCA2-202ENST00000526216 INSRP06213 1382 aa19.37■□□□□ 0.69
COLCA2-202ENST00000526216 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
COLCA2-202ENST00000526216 SOX12O15370 315 aa19.35■□□□□ 0.69
COLCA2-202ENST00000526216 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
COLCA2-202ENST00000526216 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
COLCA2-202ENST00000526216 LTN1O94822 1766 aa19.33■□□□□ 0.69
COLCA2-202ENST00000526216 ABCA3Q99758 1704 aa19.33■□□□□ 0.69
COLCA2-202ENST00000526216 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
COLCA2-202ENST00000526216 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
COLCA2-202ENST00000526216 TOM1O60784 492 aa19.31■□□□□ 0.68
COLCA2-202ENST00000526216 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
COLCA2-202ENST00000526216 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 ADAMTS8Q9UP79 889 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
COLCA2-202ENST00000526216 GCP02774 474 aa19.29■□□□□ 0.68
COLCA2-202ENST00000526216 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
COLCA2-202ENST00000526216 KCNH5Q8NCM2 988 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 CABLES1Q8TDN4 633 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 FLT4P35916 1363 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
COLCA2-202ENST00000526216 RGPD1P0DJD0 1748 aa19.27■□□□□ 0.67
COLCA2-202ENST00000526216 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
COLCA2-202ENST00000526216 IL13P35225 146 aa19.26■□□□□ 0.67
COLCA2-202ENST00000526216 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
COLCA2-202ENST00000526216 HSP90AB2PQ58FF8 381 aa19.26■□□□□ 0.67
COLCA2-202ENST00000526216 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms