RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 FYB1O15117 783 aa19.62■□□□□ 0.73
COLCA2-202ENST00000526216 CADPS2Q86UW7 1296 aa19.62■□□□□ 0.73
COLCA2-202ENST00000526216 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
COLCA2-202ENST00000526216 TTC21BQ7Z4L5 1316 aa19.61■□□□□ 0.73
COLCA2-202ENST00000526216 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
COLCA2-202ENST00000526216 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
COLCA2-202ENST00000526216 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
COLCA2-202ENST00000526216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
COLCA2-202ENST00000526216 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
COLCA2-202ENST00000526216 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
COLCA2-202ENST00000526216 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
COLCA2-202ENST00000526216 NME9Q86XW9 330 aa19.59■□□□□ 0.73
COLCA2-202ENST00000526216 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.73
COLCA2-202ENST00000526216 MARF1Q9Y4F3 1742 aaKnown RBP19.57■□□□□ 0.72
COLCA2-202ENST00000526216 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
COLCA2-202ENST00000526216 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 USP54Q70EL1 1684 aa19.56■□□□□ 0.72
COLCA2-202ENST00000526216 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
COLCA2-202ENST00000526216 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
COLCA2-202ENST00000526216 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
COLCA2-202ENST00000526216 FOXO3O43524 673 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 BRINP3Q76B58 766 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 DDX17Q92841 729 aaKnown RBP19.52■□□□□ 0.72
COLCA2-202ENST00000526216 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
COLCA2-202ENST00000526216 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
COLCA2-202ENST00000526216 PXDNQ92626 1479 aa19.51■□□□□ 0.71
COLCA2-202ENST00000526216 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
COLCA2-202ENST00000526216 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
COLCA2-202ENST00000526216 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
COLCA2-202ENST00000526216 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 PSME1Q06323 249 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
COLCA2-202ENST00000526216 FBLN1P23142 703 aa19.48■□□□□ 0.71
COLCA2-202ENST00000526216 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
COLCA2-202ENST00000526216 COG3Q96JB2 828 aa19.47■□□□□ 0.71
COLCA2-202ENST00000526216 ROBO1Q9Y6N7 1651 aa19.46■□□□□ 0.71
COLCA2-202ENST00000526216 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
COLCA2-202ENST00000526216 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
COLCA2-202ENST00000526216 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
COLCA2-202ENST00000526216 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
COLCA2-202ENST00000526216 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
COLCA2-202ENST00000526216 SLIT3O75094 1523 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 MTHFSP49914 203 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
COLCA2-202ENST00000526216 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 NLRP6P59044 892 aa19.42■□□□□ 0.7
COLCA2-202ENST00000526216 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
COLCA2-202ENST00000526216 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 NFAT5O94916 1531 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
COLCA2-202ENST00000526216 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
COLCA2-202ENST00000526216 SOS2Q07890 1332 aaPredicted RBP19.41■□□□□ 0.7
COLCA2-202ENST00000526216 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
COLCA2-202ENST00000526216 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 EMILIN1Q9Y6C2 1016 aa19.4■□□□□ 0.7
COLCA2-202ENST00000526216 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 USP19O94966 1318 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 SPATA31A3Q5VYP0 1347 aa19.39■□□□□ 0.69
COLCA2-202ENST00000526216 PHRF1Q9P1Y6 1649 aaKnown RBP19.38■□□□□ 0.69
COLCA2-202ENST00000526216 PNPLA6Q8IY17 1366 aa19.38■□□□□ 0.69
COLCA2-202ENST00000526216 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
COLCA2-202ENST00000526216 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
COLCA2-202ENST00000526216 INSRP06213 1382 aa19.37■□□□□ 0.69
COLCA2-202ENST00000526216 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
COLCA2-202ENST00000526216 SOX12O15370 315 aa19.35■□□□□ 0.69
COLCA2-202ENST00000526216 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
COLCA2-202ENST00000526216 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
COLCA2-202ENST00000526216 LTN1O94822 1766 aa19.33■□□□□ 0.69
COLCA2-202ENST00000526216 ABCA3Q99758 1704 aa19.33■□□□□ 0.69
COLCA2-202ENST00000526216 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
COLCA2-202ENST00000526216 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
COLCA2-202ENST00000526216 TOM1O60784 492 aa19.31■□□□□ 0.68
COLCA2-202ENST00000526216 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
COLCA2-202ENST00000526216 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 ADAMTS8Q9UP79 889 aa19.3■□□□□ 0.68
COLCA2-202ENST00000526216 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
COLCA2-202ENST00000526216 GCP02774 474 aa19.29■□□□□ 0.68
COLCA2-202ENST00000526216 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
COLCA2-202ENST00000526216 KCNH5Q8NCM2 988 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 CABLES1Q8TDN4 633 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 FLT4P35916 1363 aa19.27■□□□□ 0.68
COLCA2-202ENST00000526216 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
COLCA2-202ENST00000526216 RGPD1P0DJD0 1748 aa19.27■□□□□ 0.67
COLCA2-202ENST00000526216 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
COLCA2-202ENST00000526216 IL13P35225 146 aa19.26■□□□□ 0.67
COLCA2-202ENST00000526216 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
COLCA2-202ENST00000526216 HSP90AB2PQ58FF8 381 aa19.26■□□□□ 0.67
COLCA2-202ENST00000526216 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms