RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 SSFA2P28290 1259 aa13.89□□□□□ -0.19
PFDN1-207ENST00000524074 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
PFDN1-207ENST00000524074 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
PFDN1-207ENST00000524074 FKBPLQ9UIM3 349 aa13.89□□□□□ -0.19
PFDN1-207ENST00000524074 SAMD7Q7Z3H4 446 aa13.87□□□□□ -0.19
PFDN1-207ENST00000524074 DEPDC4Q8N2C3 294 aa13.87□□□□□ -0.19
PFDN1-207ENST00000524074 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
PFDN1-207ENST00000524074 CRTC2Q53ET0 693 aaPredicted RBP13.86□□□□□ -0.19
PFDN1-207ENST00000524074 MORN1Q5T089 497 aa13.85□□□□□ -0.19
PFDN1-207ENST00000524074 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
PFDN1-207ENST00000524074 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
PFDN1-207ENST00000524074 HOXB1P14653 301 aaPredicted RBP13.84□□□□□ -0.19
PFDN1-207ENST00000524074 RASA1P20936 1047 aa13.84□□□□□ -0.19
PFDN1-207ENST00000524074 DNAJC14Q6Y2X3 702 aaPredicted RBP13.84□□□□□ -0.19
PFDN1-207ENST00000524074 FAM174AQ8TBP5 190 aa13.84□□□□□ -0.19
PFDN1-207ENST00000524074 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
PFDN1-207ENST00000524074 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
PFDN1-207ENST00000524074 SLC27A5Q9Y2P5 690 aa13.84□□□□□ -0.19
PFDN1-207ENST00000524074 ATP5J2-PTCD1G3V325 749 aa13.83□□□□□ -0.2
PFDN1-207ENST00000524074 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
PFDN1-207ENST00000524074 SOWAHDA6NJG2 315 aa13.82□□□□□ -0.2
PFDN1-207ENST00000524074 PSEN2P49810 448 aa13.82□□□□□ -0.2
PFDN1-207ENST00000524074 PTK7Q13308 1070 aa13.82□□□□□ -0.2
PFDN1-207ENST00000524074 PUS10Q3MIT2 529 aaKnown RBP13.82□□□□□ -0.2
PFDN1-207ENST00000524074 MRRFQ96E11 262 aaKnown RBP13.82□□□□□ -0.2
PFDN1-207ENST00000524074 NCOA4Q13772 614 aa13.81□□□□□ -0.2
PFDN1-207ENST00000524074 CDCA7Q9BWT1 371 aaPredicted RBP13.81□□□□□ -0.2
PFDN1-207ENST00000524074 SLC4A5Q9BY07 1137 aa13.81□□□□□ -0.2
PFDN1-207ENST00000524074 ATP2B4P23634 1241 aa13.8□□□□□ -0.2
PFDN1-207ENST00000524074 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
PFDN1-207ENST00000524074 IGSF5Q9NSI5 407 aa13.79□□□□□ -0.2
PFDN1-207ENST00000524074 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
PFDN1-207ENST00000524074 ACTN4O43707 911 aaKnown RBP13.78□□□□□ -0.2
PFDN1-207ENST00000524074 SERPINB4P48594 390 aa13.78□□□□□ -0.2
PFDN1-207ENST00000524074 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
PFDN1-207ENST00000524074 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
PFDN1-207ENST00000524074 ANKMY2Q8IV38 441 aa13.78□□□□□ -0.2
PFDN1-207ENST00000524074 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
PFDN1-207ENST00000524074 USB1Q9BQ65 265 aaKnown RBP13.78□□□□□ -0.2
PFDN1-207ENST00000524074 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
PFDN1-207ENST00000524074 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-207ENST00000524074 SNPHO15079 494 aa13.77□□□□□ -0.21
PFDN1-207ENST00000524074 LZTS3O60299 673 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-207ENST00000524074 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-207ENST00000524074 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
PFDN1-207ENST00000524074 CEP126Q9P2H0 1117 aa13.77□□□□□ -0.21
PFDN1-207ENST00000524074 LAPTM4BQ86VI4 370 aa13.76□□□□□ -0.21
PFDN1-207ENST00000524074 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-207ENST00000524074 MAP10Q9P2G4 905 aa13.76□□□□□ -0.21
PFDN1-207ENST00000524074 ARHGAP33O14559 1287 aa13.75□□□□□ -0.21
PFDN1-207ENST00000524074 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
PFDN1-207ENST00000524074 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-207ENST00000524074 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-207ENST00000524074 SWI5Q1ZZU3 235 aa13.75□□□□□ -0.21
PFDN1-207ENST00000524074 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
PFDN1-207ENST00000524074 PLPP7Q8NBV4 271 aa13.75□□□□□ -0.21
PFDN1-207ENST00000524074 EML3Q32P44 896 aa13.74□□□□□ -0.21
PFDN1-207ENST00000524074 PRR14Q9BWN1 585 aa13.74□□□□□ -0.21
PFDN1-207ENST00000524074 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
PFDN1-207ENST00000524074 CTHP32929 405 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 PTK2Q05397 1052 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 DPYDQ12882 1025 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 BLOC1S3Q6QNY0 202 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 GPSM3Q9Y4H4 160 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 PCDHB9Q9Y5E1 797 aa13.73□□□□□ -0.21
PFDN1-207ENST00000524074 PTPRNQ16849 979 aa13.72□□□□□ -0.21
PFDN1-207ENST00000524074 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
PFDN1-207ENST00000524074 GIPC2Q8TF65 315 aa13.72□□□□□ -0.21
PFDN1-207ENST00000524074 MAP7D1Q3KQU3 841 aa13.71□□□□□ -0.21
PFDN1-207ENST00000524074 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.21
PFDN1-207ENST00000524074 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
PFDN1-207ENST00000524074 JUNDP17535 347 aa13.7□□□□□ -0.22
PFDN1-207ENST00000524074 ATP1A2P50993 1020 aa13.7□□□□□ -0.22
PFDN1-207ENST00000524074 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-207ENST00000524074 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-207ENST00000524074 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
PFDN1-207ENST00000524074 NOM1Q5C9Z4 860 aaKnown RBP13.69□□□□□ -0.22
PFDN1-207ENST00000524074 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
PFDN1-207ENST00000524074 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
PFDN1-207ENST00000524074 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
PFDN1-207ENST00000524074 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
PFDN1-207ENST00000524074 PDXDC2PQ6P474 469 aa13.68□□□□□ -0.22
PFDN1-207ENST00000524074 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
PFDN1-207ENST00000524074 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
PFDN1-207ENST00000524074 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
PFDN1-207ENST00000524074 DNAAF2Q9NVR5 837 aaKnown RBP13.68□□□□□ -0.22
PFDN1-207ENST00000524074 ANKRD33BA6NCL7 494 aa13.67□□□□□ -0.22
PFDN1-207ENST00000524074 FMNL1O95466 1100 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-207ENST00000524074 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
PFDN1-207ENST00000524074 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
PFDN1-207ENST00000524074 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
PFDN1-207ENST00000524074 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
PFDN1-207ENST00000524074 NBPF14Q5TI25 921 aa13.65□□□□□ -0.22
PFDN1-207ENST00000524074 TCF3P15923 654 aa13.64□□□□□ -0.23
PFDN1-207ENST00000524074 CLDN10P78369 228 aa13.64□□□□□ -0.23
PFDN1-207ENST00000524074 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
PFDN1-207ENST00000524074 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
PFDN1-207ENST00000524074 RBM19Q9Y4C8 960 aaKnown RBP13.64□□□□□ -0.23
PFDN1-207ENST00000524074 ABL1P00519 1130 aa13.63□□□□□ -0.23
PFDN1-207ENST00000524074 SCNN1AP37088 669 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms