RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 DLC1Q96QB1 1528 aa8.88□□□□□ -0.99
FAM49B-228ENST00000523993 RGL3Q3MIN7 710 aa8.87□□□□□ -0.99
FAM49B-228ENST00000523993 PXDNQ92626 1479 aa8.87□□□□□ -0.99
FAM49B-228ENST00000523993 ADGRB1O14514 1584 aa8.86□□□□□ -0.99
FAM49B-228ENST00000523993 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
FAM49B-228ENST00000523993 STAC3Q96MF2 364 aa8.86□□□□□ -0.99
FAM49B-228ENST00000523993 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
FAM49B-228ENST00000523993 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
FAM49B-228ENST00000523993 NPHP3Q7Z494 1330 aa8.84□□□□□ -0.99
FAM49B-228ENST00000523993 GSE1Q14687 1217 aa8.84□□□□□ -0.99
FAM49B-228ENST00000523993 DDX17Q92841 729 aaKnown RBP8.84□□□□□ -0.99
FAM49B-228ENST00000523993 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.84□□□□□ -0.99
FAM49B-228ENST00000523993 KIAA1210Q9ULL0 1709 aa8.84□□□□□ -0.99
FAM49B-228ENST00000523993 EP400Q96L91 3159 aa8.84□□□□□ -0.99
FAM49B-228ENST00000523993 DHX57Q6P158 1386 aaKnown RBP8.84□□□□□ -0.99
FAM49B-228ENST00000523993 PLEKHH1Q9ULM0 1364 aa8.84□□□□□ -0.99
FAM49B-228ENST00000523993 USP32Q8NFA0 1604 aa8.83□□□□□ -1
FAM49B-228ENST00000523993 MEX3CQ5U5Q3 659 aaKnown RBP8.83□□□□□ -1
FAM49B-228ENST00000523993 TMEM132EQ6IEE7 984 aa8.83□□□□□ -1
FAM49B-228ENST00000523993 WAPLQ7Z5K2 1190 aa8.83□□□□□ -1
FAM49B-228ENST00000523993 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
FAM49B-228ENST00000523993 AFF2P51816 1311 aa8.82□□□□□ -1
FAM49B-228ENST00000523993 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
FAM49B-228ENST00000523993 ABCA3Q99758 1704 aa8.81□□□□□ -1
FAM49B-228ENST00000523993 RXRBP28702 533 aa8.81□□□□□ -1
FAM49B-228ENST00000523993 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
FAM49B-228ENST00000523993 CFAP70Q5T0N1 1121 aa8.81□□□□□ -1
FAM49B-228ENST00000523993 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
FAM49B-228ENST00000523993 STK26Q9P289 416 aa8.81□□□□□ -1
FAM49B-228ENST00000523993 ANKARQ7Z5J8 1434 aa8.8□□□□□ -1
FAM49B-228ENST00000523993 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
FAM49B-228ENST00000523993 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
FAM49B-228ENST00000523993 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
FAM49B-228ENST00000523993 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
FAM49B-228ENST00000523993 ITSN1Q15811 1721 aa8.8□□□□□ -1
FAM49B-228ENST00000523993 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
FAM49B-228ENST00000523993 ALS2Q96Q42 1657 aa8.79□□□□□ -1
FAM49B-228ENST00000523993 STK25O00506 426 aa8.79□□□□□ -1
FAM49B-228ENST00000523993 FOXO3O43524 673 aa8.79□□□□□ -1
FAM49B-228ENST00000523993 RBM6P78332 1123 aaKnown RBP8.79□□□□□ -1
FAM49B-228ENST00000523993 ATRNO75882 1429 aa8.79□□□□□ -1
FAM49B-228ENST00000523993 SPATA31A3Q5VYP0 1347 aa8.79□□□□□ -1
FAM49B-228ENST00000523993 BCL9LQ86UU0 1499 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 SBNO1A3KN83 1393 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 CRYBG1Q9Y4K1 1723 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 PRR29P0C7W0 189 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 NUBP1P53384 320 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 C8orf37Q96NL8 207 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
FAM49B-228ENST00000523993 RGS12O14924 1447 aa8.78□□□□□ -1
FAM49B-228ENST00000523993 SLIT2O94813 1529 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 TULP4Q9NRJ4 1543 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 TMEM132AQ24JP5 1023 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 UPF1Q92900 1129 aaKnown RBP eCLIP8.77□□□□□ -1.01
FAM49B-228ENST00000523993 NGLY1Q96IV0 654 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 PRAM1Q96QH2 718 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 ARXQ96QS3 562 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 TNS3Q68CZ2 1445 aa8.77□□□□□ -1.01
FAM49B-228ENST00000523993 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
FAM49B-228ENST00000523993 PLCH1Q4KWH8 1693 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 TOPAZ1Q8N9V7 1692 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 CHADLQ6NUI6 762 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 ERICH6Q7L0X2 663 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 TRPC5Q9UL62 973 aaPredicted RBP8.76□□□□□ -1.01
FAM49B-228ENST00000523993 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
FAM49B-228ENST00000523993 ADAMTS2O95450 1211 aa8.75□□□□□ -1.01
FAM49B-228ENST00000523993 DCAF8Q5TAQ9 597 aa8.75□□□□□ -1.01
FAM49B-228ENST00000523993 KRT28Q7Z3Y7 464 aa8.75□□□□□ -1.01
FAM49B-228ENST00000523993 USP21Q9UK80 565 aa8.75□□□□□ -1.01
FAM49B-228ENST00000523993 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
FAM49B-228ENST00000523993 ARHGEF10O15013 1369 aa8.74□□□□□ -1.01
FAM49B-228ENST00000523993 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
FAM49B-228ENST00000523993 NUTM2FA1L443 756 aa8.74□□□□□ -1.01
FAM49B-228ENST00000523993 PSME1Q06323 249 aa8.74□□□□□ -1.01
FAM49B-228ENST00000523993 ATP7BP35670 1465 aa8.74□□□□□ -1.01
FAM49B-228ENST00000523993 GLI3P10071 1580 aa8.73□□□□□ -1.01
FAM49B-228ENST00000523993 WASLO00401 505 aaPredicted RBP8.73□□□□□ -1.01
FAM49B-228ENST00000523993 CLCN6P51797 869 aa8.73□□□□□ -1.01
FAM49B-228ENST00000523993 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
FAM49B-228ENST00000523993 POGKQ9P215 609 aa8.73□□□□□ -1.01
FAM49B-228ENST00000523993 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
FAM49B-228ENST00000523993 PRR36Q9H6K5 1346 aa8.73□□□□□ -1.01
FAM49B-228ENST00000523993 COL14A1Q05707 1796 aaKnown RBP8.72□□□□□ -1.01
FAM49B-228ENST00000523993 UNC5CLQ8IV45 518 aa8.72□□□□□ -1.01
FAM49B-228ENST00000523993 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
FAM49B-228ENST00000523993 SRCAPQ6ZRS2 3230 aa8.72□□□□□ -1.01
FAM49B-228ENST00000523993 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
FAM49B-228ENST00000523993 SAFB2Q14151 953 aaKnown RBP eCLIP8.71□□□□□ -1.02
FAM49B-228ENST00000523993 GJD4Q96KN9 370 aaPredicted RBP8.71□□□□□ -1.02
FAM49B-228ENST00000523993 TRPM1Q7Z4N2 1603 aa8.71□□□□□ -1.02
FAM49B-228ENST00000523993 POLR3AO14802 1390 aaPredicted RBP8.71□□□□□ -1.02
FAM49B-228ENST00000523993 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
FAM49B-228ENST00000523993 RALGAPBQ86X10 1494 aa8.7□□□□□ -1.02
FAM49B-228ENST00000523993 PHRF1Q9P1Y6 1649 aaKnown RBP8.7□□□□□ -1.02
FAM49B-228ENST00000523993 QRICH2Q9H0J4 1663 aa8.7□□□□□ -1.02
FAM49B-228ENST00000523993 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
FAM49B-228ENST00000523993 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
FAM49B-228ENST00000523993 VPS72Q15906 364 aa8.69□□□□□ -1.02
FAM49B-228ENST00000523993 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms