RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 VGFO15240 615 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 TRIM27P14373 513 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 POGKQ9P215 609 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 CD163L1Q9NR16 1453 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 TSPOAP1O95153 1857 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 MINK1Q8N4C8 1332 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 FTSJ3Q8IY81 847 aaKnown RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 DZIP1LQ8IYY4 767 aaKnown RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 SSH1Q8WYL5 1049 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 SMC4Q9NTJ3 1288 aa10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 PTPRMP28827 1452 aa10.21□□□□□ -0.77
TNFRSF10B-208ENST00000523752 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ANTXR1Q9H6X2 564 aa10.21□□□□□ -0.78
TNFRSF10B-208ENST00000523752 FYB1O15117 783 aa10.2□□□□□ -0.78
TNFRSF10B-208ENST00000523752 FBLN1P23142 703 aa10.2□□□□□ -0.78
TNFRSF10B-208ENST00000523752 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
TNFRSF10B-208ENST00000523752 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
TNFRSF10B-208ENST00000523752 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ANKRD26Q9UPS8 1709 aa10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 YEATS2Q9ULM3 1422 aa10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ITPRIPQ8IWB1 547 aa10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 PUS7Q96PZ0 661 aaKnown RBP10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 AAMPQ13685 434 aa10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
TNFRSF10B-208ENST00000523752 BECN1Q14457 450 aa10.18□□□□□ -0.78
TNFRSF10B-208ENST00000523752 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
TNFRSF10B-208ENST00000523752 TMEM57Q8N5G2 664 aa10.18□□□□□ -0.78
TNFRSF10B-208ENST00000523752 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
TNFRSF10B-208ENST00000523752 RICTORQ6R327 1708 aa10.18□□□□□ -0.78
TNFRSF10B-208ENST00000523752 RIPK4P57078 832 aa10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ATF7IPQ6VMQ6 1270 aa10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ZMYM3Q14202 1370 aa10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 MFAP1P55081 439 aaKnown RBP10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 CLTCQ00610 1675 aaKnown RBP10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 LRRC7Q96NW7 1537 aa10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 UPF2Q9HAU5 1272 aaKnown RBP10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ARHGAP31Q2M1Z3 1444 aa10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 KIF20BQ96Q89 1820 aa10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
TNFRSF10B-208ENST00000523752 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
TNFRSF10B-208ENST00000523752 HDAC1Q13547 482 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF10B-208ENST00000523752 THUMPD2Q9BTF0 503 aaKnown RBP10.15□□□□□ -0.78
TNFRSF10B-208ENST00000523752 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
TNFRSF10B-208ENST00000523752 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 CT47B1P0C2W7 299 aaPredicted RBP10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 ZBTB40Q9NUA8 1239 aa10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 NEO1Q92859 1461 aa10.15□□□□□ -0.79
TNFRSF10B-208ENST00000523752 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 C22orf23Q9BZE7 217 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 PNPLA6Q8IY17 1366 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 ALKQ9UM73 1620 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 MED14O60244 1454 aa10.14□□□□□ -0.79
TNFRSF10B-208ENST00000523752 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 SLC52A1Q9NWF4 448 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 PHACTR3Q96KR7 559 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 HMOX1P09601 288 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 IL16Q14005 1332 aa10.13□□□□□ -0.79
TNFRSF10B-208ENST00000523752 WAPLQ7Z5K2 1190 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 LNPKQ9C0E8 428 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 FAM135BQ49AJ0 1406 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 POLKQ9UBT6 870 aa10.12□□□□□ -0.79
TNFRSF10B-208ENST00000523752 TSPYL6Q8N831 410 aa10.11□□□□□ -0.79
TNFRSF10B-208ENST00000523752 CDC42BPGQ6DT37 1551 aa10.11□□□□□ -0.79
TNFRSF10B-208ENST00000523752 HDGFL2Q7Z4V5 671 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF10B-208ENST00000523752 KIF16BQ96L93 1317 aa10.11□□□□□ -0.79
TNFRSF10B-208ENST00000523752 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
TNFRSF10B-208ENST00000523752 ELL2O00472 640 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF10B-208ENST00000523752 NUCB1Q02818 461 aa10.1□□□□□ -0.79
TNFRSF10B-208ENST00000523752 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
TNFRSF10B-208ENST00000523752 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF10B-208ENST00000523752 PPIP5K1Q6PFW1 1433 aa10.09□□□□□ -0.79
TNFRSF10B-208ENST00000523752 FCHSD2O94868 740 aa10.09□□□□□ -0.79
TNFRSF10B-208ENST00000523752 FBXO41Q8TF61 875 aa10.09□□□□□ -0.79
TNFRSF10B-208ENST00000523752 NCKAP5LQ9HCH0 1330 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 MCM4P33991 863 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 DLG5Q8TDM6 1919 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 SETD1AO15047 1707 aaKnown RBP10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 VAMP4O75379 141 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 ALDH1L2Q3SY69 923 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 NME9Q86XW9 330 aa10.08□□□□□ -0.8
TNFRSF10B-208ENST00000523752 ZBTB7BO15156 539 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms