RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 UBR1Q8IWV7 1749 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-223ENST00000523636 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
PABPC1-223ENST00000523636 BARGINQ6ZT62 677 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 PRDM15P57071 1507 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-223ENST00000523636 PREX2Q70Z35 1606 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 A2MP01023 1474 aa8.57□□□□□ -1.04
PABPC1-223ENST00000523636 MAST1Q9Y2H9 1570 aa8.56□□□□□ -1.04
PABPC1-223ENST00000523636 ARHGAP23Q9P227 1491 aa8.56□□□□□ -1.04
PABPC1-223ENST00000523636 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
PABPC1-223ENST00000523636 NCOA2Q15596 1464 aa8.55□□□□□ -1.04
PABPC1-223ENST00000523636 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-223ENST00000523636 BRWD3Q6RI45 1802 aa8.54□□□□□ -1.04
PABPC1-223ENST00000523636 GPR37O15354 613 aa8.54□□□□□ -1.04
PABPC1-223ENST00000523636 ZNF710Q8N1W2 664 aa8.54□□□□□ -1.04
PABPC1-223ENST00000523636 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
PABPC1-223ENST00000523636 ARSIQ5FYB1 569 aa8.53□□□□□ -1.04
PABPC1-223ENST00000523636 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
PABPC1-223ENST00000523636 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
PABPC1-223ENST00000523636 SLIT1O75093 1534 aa8.53□□□□□ -1.04
PABPC1-223ENST00000523636 NUTM2FA1L443 756 aa8.52□□□□□ -1.05
PABPC1-223ENST00000523636 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-223ENST00000523636 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
PABPC1-223ENST00000523636 ATRNO75882 1429 aa8.52□□□□□ -1.05
PABPC1-223ENST00000523636 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 ABCC3O15438 1527 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 TET3O43151 1660 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 POTEMA6NI47 508 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 FCHSD2O94868 740 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 NUDT7P0C024 238 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
PABPC1-223ENST00000523636 FOSBP53539 338 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 FAM9AQ8IZU1 332 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-223ENST00000523636 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 RTEL1-TNFRSF6BF6WH68 1400 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
PABPC1-223ENST00000523636 SYCP2Q9BX26 1530 aa8.5□□□□□ -1.05
PABPC1-223ENST00000523636 HIC1Q14526 733 aa8.5□□□□□ -1.05
PABPC1-223ENST00000523636 POTEGQ6S5H5 508 aa8.5□□□□□ -1.05
PABPC1-223ENST00000523636 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-223ENST00000523636 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
PABPC1-223ENST00000523636 MSH6P52701 1360 aa8.49□□□□□ -1.05
PABPC1-223ENST00000523636 SETD5Q9C0A6 1442 aa8.49□□□□□ -1.05
PABPC1-223ENST00000523636 KCNA6P17658 529 aa8.49□□□□□ -1.05
PABPC1-223ENST00000523636 PTGDRQ13258 359 aa8.49□□□□□ -1.05
PABPC1-223ENST00000523636 PROSER2Q86WR7 435 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-223ENST00000523636 NKTRP30414 1462 aaKnown RBP8.49□□□□□ -1.05
PABPC1-223ENST00000523636 TROQ12816 1431 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 GNPATO15228 680 aa8.48□□□□□ -1.05
PABPC1-223ENST00000523636 ST18O60284 1047 aa8.48□□□□□ -1.05
PABPC1-223ENST00000523636 HOXB1P14653 301 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.059e-7■■□□□ 12.9
PABPC1-223ENST00000523636 AK7Q96M32 723 aa8.48□□□□□ -1.05
PABPC1-223ENST00000523636 CFAP65Q6ZU64 1925 aaKnown RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 SPAG9O60271 1321 aaKnown RBP8.48□□□□□ -1.05
PABPC1-223ENST00000523636 CHD4Q14839 1912 aa8.47□□□□□ -1.05
PABPC1-223ENST00000523636 MAP3K7O43318 606 aa8.47□□□□□ -1.05
PABPC1-223ENST00000523636 ZDHHC16Q969W1 377 aa8.47□□□□□ -1.05
PABPC1-223ENST00000523636 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-223ENST00000523636 UNC13BO14795 1591 aa8.47□□□□□ -1.05
PABPC1-223ENST00000523636 CHD2O14647 1828 aaKnown RBP8.46□□□□□ -1.06
PABPC1-223ENST00000523636 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
PABPC1-223ENST00000523636 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
PABPC1-223ENST00000523636 PCDH10Q9P2E7 1040 aa8.46□□□□□ -1.06
PABPC1-223ENST00000523636 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
PABPC1-223ENST00000523636 GPATCH8Q9UKJ3 1502 aaKnown RBP8.45□□□□□ -1.06
PABPC1-223ENST00000523636 GLI3P10071 1580 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 R3HDM1Q15032 1099 aaKnown RBP8.45□□□□□ -1.06
PABPC1-223ENST00000523636 BRINP3Q76B58 766 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 SPHKAPQ2M3C7 1700 aa8.45□□□□□ -1.06
PABPC1-223ENST00000523636 HNRNPMP52272 730 aaKnown RBP eCLIP8.44□□□□□ -1.06
PABPC1-223ENST00000523636 FNBP4Q8N3X1 1017 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-223ENST00000523636 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-223ENST00000523636 USP21Q9UK80 565 aa8.44□□□□□ -1.06
PABPC1-223ENST00000523636 TRPC5Q9UL62 973 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-223ENST00000523636 ERVK-7P63135 1459 aa8.44□□□□□ -1.06
PABPC1-223ENST00000523636 CAMSAP2Q08AD1 1489 aa8.44□□□□□ -1.06
PABPC1-223ENST00000523636 PPP4R3BQ5MIZ7 849 aa8.43□□□□□ -1.06
PABPC1-223ENST00000523636 C6orf132Q5T0Z8 1188 aa8.43□□□□□ -1.06
PABPC1-223ENST00000523636 ASXL1Q8IXJ9 1541 aa8.43□□□□□ -1.06
PABPC1-223ENST00000523636 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
PABPC1-223ENST00000523636 IRF6O14896 467 aa8.42□□□□□ -1.06
PABPC1-223ENST00000523636 ADAMTS2O95450 1211 aa8.42□□□□□ -1.06
PABPC1-223ENST00000523636 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-223ENST00000523636 TSR1Q2NL82 804 aaKnown RBP8.42□□□□□ -1.06
PABPC1-223ENST00000523636 SLC26A8Q96RN1 970 aa8.42□□□□□ -1.06
PABPC1-223ENST00000523636 CDHR5Q9HBB8 845 aa8.42□□□□□ -1.06
PABPC1-223ENST00000523636 MROH1Q8NDA8 1641 aa8.42□□□□□ -1.06
PABPC1-223ENST00000523636 MYT1Q01538 1121 aa8.41□□□□□ -1.06
PABPC1-223ENST00000523636 DDX17Q92841 729 aaKnown RBP8.41□□□□□ -1.06
PABPC1-223ENST00000523636 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
PABPC1-223ENST00000523636 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms