RNA–Protein interactions for RNA: ENST00000522147.4

IKBKB-223, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5 BASIC

Gene IKBKB, Length 954 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-223	ENST00000522147	MYT1	Q01538	1121 aa		18.94	■□□□□ 0.62
IKBKB-223	ENST00000522147	BAG6	P46379	1132 aa		18.93	■□□□□ 0.62
IKBKB-223	ENST00000522147	PMFBP1	Q8TBY8	1022 aa		18.93	■□□□□ 0.62
IKBKB-223	ENST00000522147	RGPD1	P0DJD0	1748 aa		18.93	■□□□□ 0.62
IKBKB-223	ENST00000522147	ITSN1	Q15811	1721 aa		18.92	■□□□□ 0.62
IKBKB-223	ENST00000522147	FAM83G	A6ND36	823 aa		18.92	■□□□□ 0.62
IKBKB-223	ENST00000522147	BTG4	Q9NY30	223 aa		18.9	■□□□□ 0.62
IKBKB-223	ENST00000522147	CRYBG1	Q9Y4K1	1723 aa		18.9	■□□□□ 0.62
IKBKB-223	ENST00000522147	CACNB1	Q02641	598 aa	Predicted RBP	18.89	■□□□□ 0.61
IKBKB-223	ENST00000522147	TRIM26	Q12899	539 aa	Predicted RBP	18.89	■□□□□ 0.61
IKBKB-223	ENST00000522147	FAM98C	Q17RN3	349 aa	Known RBP	18.89	■□□□□ 0.61
IKBKB-223	ENST00000522147	STAC3	Q96MF2	364 aa		18.89	■□□□□ 0.61
IKBKB-223	ENST00000522147	TRAK1	Q9UPV9	953 aa		18.88	■□□□□ 0.61
IKBKB-223	ENST00000522147	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.87	■□□□□ 0.61
IKBKB-223	ENST00000522147	THSD7A	Q9UPZ6	1657 aa		18.86	■□□□□ 0.61
IKBKB-223	ENST00000522147	PRR36	Q9H6K5	1346 aa		18.86	■□□□□ 0.61
IKBKB-223	ENST00000522147	WASL	O00401	505 aa	Predicted RBP	18.86	■□□□□ 0.61
IKBKB-223	ENST00000522147	NGDN	Q8NEJ9	315 aa	Known RBP	18.86	■□□□□ 0.61
IKBKB-223	ENST00000522147	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.86	■□□□□ 0.61
IKBKB-223	ENST00000522147	RAB3GAP2	Q9H2M9	1393 aa		18.85	■□□□□ 0.61
IKBKB-223	ENST00000522147	SPATA31A5	Q5VU36	1347 aa		18.85	■□□□□ 0.61
IKBKB-223	ENST00000522147	SPATA31A7	Q8IWB4	1347 aa		18.85	■□□□□ 0.61
IKBKB-223	ENST00000522147	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.85	■□□□□ 0.61
IKBKB-223	ENST00000522147	ATP7B	P35670	1465 aa		18.84	■□□□□ 0.61
IKBKB-223	ENST00000522147	PRDM11	Q9NQV5	511 aa		18.84	■□□□□ 0.61
IKBKB-223	ENST00000522147	DISP2	A7MBM2	1401 aa		18.83	■□□□□ 0.61
IKBKB-223	ENST00000522147	TNS1	Q9HBL0	1735 aa	Known RBP	18.83	■□□□□ 0.61
IKBKB-223	ENST00000522147	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.83	■□□□□ 0.61
IKBKB-223	ENST00000522147	PAK3	O75914	559 aa	Predicted RBP	18.82	■□□□□ 0.6
IKBKB-223	ENST00000522147	DCAF11	Q8TEB1	546 aa		18.81	■□□□□ 0.6
IKBKB-223	ENST00000522147	PSD	A5PKW4	1024 aa	Predicted RBP	18.8	■□□□□ 0.6
IKBKB-223	ENST00000522147	HRC	P23327	699 aa		18.8	■□□□□ 0.6
IKBKB-223	ENST00000522147	KDM2A	Q9Y2K7	1162 aa		18.8	■□□□□ 0.6
IKBKB-223	ENST00000522147	TOPAZ1	Q8N9V7	1692 aa		18.78	■□□□□ 0.6
IKBKB-223	ENST00000522147	KIAA0232	Q92628	1395 aa		18.78	■□□□□ 0.6
IKBKB-223	ENST00000522147	EN1	Q05925	392 aa	Predicted RBP	18.77	■□□□□ 0.6
IKBKB-223	ENST00000522147	PARD3	Q8TEW0	1356 aa		18.77	■□□□□ 0.6
IKBKB-223	ENST00000522147	SPATA31A1	Q5TZJ5	1347 aa		18.76	■□□□□ 0.59
IKBKB-223	ENST00000522147	NCBP3	Q53F19	620 aa	Known RBP	18.76	■□□□□ 0.59
IKBKB-223	ENST00000522147	NUDT16	Q96DE0	195 aa	Known RBP	18.76	■□□□□ 0.59
IKBKB-223	ENST00000522147	KIAA1210	Q9ULL0	1709 aa		18.75	■□□□□ 0.59
IKBKB-223	ENST00000522147	FAM196A	Q6ZSG2	479 aa		18.75	■□□□□ 0.59
IKBKB-223	ENST00000522147	POLR3A	O14802	1390 aa	Predicted RBP	18.74	■□□□□ 0.59
IKBKB-223	ENST00000522147	NRK	Q7Z2Y5	1582 aa		18.73	■□□□□ 0.59
IKBKB-223	ENST00000522147	FAM182B	Q5T319	152 aa		18.73	■□□□□ 0.59
IKBKB-223	ENST00000522147	PCGF6	Q9BYE7	350 aa		18.73	■□□□□ 0.59
IKBKB-223	ENST00000522147	R3HDM1	Q15032	1099 aa	Known RBP	18.72	■□□□□ 0.59
IKBKB-223	ENST00000522147	STRN4	Q9NRL3	753 aa		18.72	■□□□□ 0.59
IKBKB-223	ENST00000522147	SSH2	Q76I76	1423 aa		18.72	■□□□□ 0.59
IKBKB-223	ENST00000522147	CHRNA2	Q15822	529 aa		18.71	■□□□□ 0.59
IKBKB-223	ENST00000522147	CCDC61	Q9Y6R9	512 aa		18.71	■□□□□ 0.59
IKBKB-223	ENST00000522147	RREB1	Q92766	1687 aa		18.7	■□□□□ 0.58
IKBKB-223	ENST00000522147	ZC3H6	P61129	1189 aa	Known RBP	18.7	■□□□□ 0.58
IKBKB-223	ENST00000522147	BARGIN	Q6ZT62	677 aa		18.7	■□□□□ 0.58
IKBKB-223	ENST00000522147	CDK19	Q9BWU1	502 aa		18.7	■□□□□ 0.58
IKBKB-223	ENST00000522147	LMO7	Q8WWI1	1683 aa		18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	CPD	O75976	1380 aa		18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	TRIM37	O94972	964 aa		18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	EVA1C	P58658	441 aa		18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	EZH2	Q15910	746 aa	Known RBP	18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	ACE	P12821	1306 aa		18.69	■□□□□ 0.58
IKBKB-223	ENST00000522147	PLEKHG3	A1L390	1219 aa		18.68	■□□□□ 0.58
IKBKB-223	ENST00000522147	PDE3B	Q13370	1112 aa		18.68	■□□□□ 0.58
IKBKB-223	ENST00000522147	NBPF8	Q3BBV2	869 aa		18.68	■□□□□ 0.58
IKBKB-223	ENST00000522147	CAMKK2	Q96RR4	588 aa		18.68	■□□□□ 0.58
IKBKB-223	ENST00000522147	APBA3	O96018	575 aa		18.67	■□□□□ 0.58
IKBKB-223	ENST00000522147	RNF39	Q9H2S5	420 aa		18.67	■□□□□ 0.58
IKBKB-223	ENST00000522147	BRD4	O60885	1362 aa	Predicted RBP	18.67	■□□□□ 0.58
IKBKB-223	ENST00000522147	CAMTA1	Q9Y6Y1	1673 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	NUP188	Q5SRE5	1749 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	C11orf95	C9JLR9	678 aa	Predicted RBP	18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	NUTM2G	Q5VZR2	741 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	ABTB2	Q8N961	1025 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	USP35	Q9P2H5	1018 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	THRAP3	Q9Y2W1	955 aa	Known RBP	18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	USP19	O94966	1318 aa		18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	PARP4	Q9UKK3	1724 aa	Known RBP	18.66	■□□□□ 0.58
IKBKB-223	ENST00000522147	TCP11L2	Q8N4U5	519 aa		18.65	■□□□□ 0.58
IKBKB-223	ENST00000522147	NLRP13	Q86W25	1043 aa		18.64	■□□□□ 0.57
IKBKB-223	ENST00000522147	NBPF14	Q5TI25	921 aa		18.62	■□□□□ 0.57
IKBKB-223	ENST00000522147	LARP1	Q6PKG0	1096 aa	Known RBP	18.62	■□□□□ 0.57
IKBKB-223	ENST00000522147	PPIP5K1	Q6PFW1	1433 aa		18.62	■□□□□ 0.57
IKBKB-223	ENST00000522147	COL5A2	P05997	1499 aa	Predicted RBP	18.62	■□□□□ 0.57
IKBKB-223	ENST00000522147	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.61	■□□□□ 0.57
IKBKB-223	ENST00000522147	RGPD4	Q7Z3J3	1758 aa		18.61	■□□□□ 0.57
IKBKB-223	ENST00000522147	SRPK2	P78362	688 aa	Known RBP	18.6	■□□□□ 0.57
IKBKB-223	ENST00000522147	QRICH2	Q9H0J4	1663 aa		18.6	■□□□□ 0.57
IKBKB-223	ENST00000522147	CRB1	P82279	1406 aa		18.59	■□□□□ 0.57
IKBKB-223	ENST00000522147	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.59	■□□□□ 0.57
IKBKB-223	ENST00000522147	GC	P02774	474 aa		18.59	■□□□□ 0.57
IKBKB-223	ENST00000522147	OVOS2	A0A0G2JMS6	1433 aa		18.58	■□□□□ 0.57
IKBKB-223	ENST00000522147	OVOS2	A0A0J9YW53	1432 aa		18.58	■□□□□ 0.57
IKBKB-223	ENST00000522147	OVOS2	Q6IE36	1432 aa		18.58	■□□□□ 0.57
IKBKB-223	ENST00000522147	SLIT3	O75094	1523 aa		18.57	■□□□□ 0.56
IKBKB-223	ENST00000522147	PEAK1	Q9H792	1746 aa		18.56	■□□□□ 0.56
IKBKB-223	ENST00000522147	USP6	P35125	1406 aa		18.56	■□□□□ 0.56
IKBKB-223	ENST00000522147	LRRC37A3	O60309	1634 aa		18.56	■□□□□ 0.56
IKBKB-223	ENST00000522147	AATK	Q6ZMQ8	1374 aa		18.55	■□□□□ 0.56
IKBKB-223	ENST00000522147	WNK3	Q9BYP7	1800 aa		18.55	■□□□□ 0.56
IKBKB-223	ENST00000522147	SBF2	Q86WG5	1849 aa		18.54	■□□□□ 0.56

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