RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 ZNF335Q9H4Z2 1342 aaPredicted RBP36.47■■■■□ 3.43
TRNP1-201ENST00000522111 ESCO1Q5FWF5 840 aa36.47■■■■□ 3.43
TRNP1-201ENST00000522111 C19orf44Q9H6X5 657 aa36.47■■■■□ 3.43
TRNP1-201ENST00000522111 PHF8Q9UPP1 1060 aa36.46■■■■□ 3.43
TRNP1-201ENST00000522111 ADAMTS8Q9UP79 889 aa36.44■■■■□ 3.42
TRNP1-201ENST00000522111 FBLN1P23142 703 aa36.44■■■■□ 3.42
TRNP1-201ENST00000522111 COG3Q96JB2 828 aa36.43■■■■□ 3.42
TRNP1-201ENST00000522111 SSH2Q76I76 1423 aa36.42■■■■□ 3.42
TRNP1-201ENST00000522111 ORAI2Q96SN7 254 aa36.39■■■■□ 3.42
TRNP1-201ENST00000522111 XIRP1Q702N8 1843 aaKnown RBP36.38■■■■□ 3.41
TRNP1-201ENST00000522111 ZBED9Q6R2W3 1325 aa36.38■■■■□ 3.41
TRNP1-201ENST00000522111 ATF3P18847 181 aa36.38■■■■□ 3.41
TRNP1-201ENST00000522111 CFAP53Q96M91 514 aa36.38■■■■□ 3.41
TRNP1-201ENST00000522111 SHPRHQ149N8 1683 aa36.37■■■■□ 3.41
TRNP1-201ENST00000522111 BLMP54132 1417 aaPredicted RBP36.36■■■■□ 3.41
TRNP1-201ENST00000522111 NCOA3Q9Y6Q9 1424 aa36.36■■■■□ 3.41
TRNP1-201ENST00000522111 MAP2P11137 1827 aaKnown RBP36.35■■■■□ 3.41
TRNP1-201ENST00000522111 TTC21AQ8NDW8 1320 aa36.35■■■■□ 3.41
TRNP1-201ENST00000522111 LRRC7Q96NW7 1537 aa36.34■■■■□ 3.41
TRNP1-201ENST00000522111 C1orf167Q5SNV9 1468 aa36.33■■■■□ 3.41
TRNP1-201ENST00000522111 PPM1GO15355 546 aaPredicted RBP36.33■■■■□ 3.41
TRNP1-201ENST00000522111 OVOS2A0A0J9YW53 1432 aa36.33■■■■□ 3.41
TRNP1-201ENST00000522111 OVOS2Q6IE36 1432 aa36.33■■■■□ 3.41
TRNP1-201ENST00000522111 PIK3C2AO00443 1686 aa36.33■■■■□ 3.41
TRNP1-201ENST00000522111 PAK3O75914 559 aaPredicted RBP36.33■■■■□ 3.41
TRNP1-201ENST00000522111 MSH6P52701 1360 aa36.32■■■■□ 3.4
TRNP1-201ENST00000522111 DMRT2Q9Y5R5 561 aa36.31■■■■□ 3.4
TRNP1-201ENST00000522111 SCAF1Q9H7N4 1312 aaKnown RBP36.31■■■■□ 3.4
TRNP1-201ENST00000522111 DCCP43146 1447 aa36.31■■■■□ 3.4
TRNP1-201ENST00000522111 POLKQ9UBT6 870 aa36.31■■■■□ 3.4
TRNP1-201ENST00000522111 SALL2Q9Y467 1007 aaPredicted RBP36.31■■■■□ 3.4
TRNP1-201ENST00000522111 MST1RQ04912 1400 aa36.3■■■■□ 3.4
TRNP1-201ENST00000522111 PSME1Q06323 249 aa36.29■■■■□ 3.4
TRNP1-201ENST00000522111 EMILIN1Q9Y6C2 1016 aa36.29■■■■□ 3.4
TRNP1-201ENST00000522111 FOXO3O43524 673 aa36.28■■■■□ 3.4
TRNP1-201ENST00000522111 INSRP06213 1382 aa36.28■■■■□ 3.4
TRNP1-201ENST00000522111 SOX12O15370 315 aa36.27■■■■□ 3.4
TRNP1-201ENST00000522111 RRS1Q15050 365 aaKnown RBP36.27■■■■□ 3.4
TRNP1-201ENST00000522111 NUTM2GQ5VZR2 741 aa36.27■■■■□ 3.4
TRNP1-201ENST00000522111 CCDC146Q8IYE0 955 aa36.27■■■■□ 3.4
TRNP1-201ENST00000522111 XPCQ01831 940 aaPredicted RBP36.26■■■■□ 3.4
TRNP1-201ENST00000522111 CADPS2Q86UW7 1296 aa36.26■■■■□ 3.4
TRNP1-201ENST00000522111 COL3A1P02461 1466 aaPredicted RBP36.26■■■■□ 3.39
TRNP1-201ENST00000522111 AATKQ6ZMQ8 1374 aa36.25■■■■□ 3.39
TRNP1-201ENST00000522111 ABTB2Q8N961 1025 aa36.24■■■■□ 3.39
TRNP1-201ENST00000522111 KIF1AQ12756 1690 aa36.23■■■■□ 3.39
TRNP1-201ENST00000522111 NLRP6P59044 892 aa36.22■■■■□ 3.39
TRNP1-201ENST00000522111 PNPLA6Q8IY17 1366 aa36.19■■■■□ 3.38
TRNP1-201ENST00000522111 USP31Q70CQ4 1352 aa36.19■■■■□ 3.38
TRNP1-201ENST00000522111 SMG6Q86US8 1419 aaKnown RBP36.18■■■■□ 3.38
TRNP1-201ENST00000522111 MARF1Q9Y4F3 1742 aaKnown RBP36.18■■■■□ 3.38
TRNP1-201ENST00000522111 U2SURPO15042 1029 aaKnown RBP36.18■■■■□ 3.38
TRNP1-201ENST00000522111 U2AF1L5P0DN76 240 aaPredicted RBP36.17■■■■□ 3.38
TRNP1-201ENST00000522111 U2AF1Q01081 240 aaKnown RBP eCLIP36.17■■■■□ 3.38
TRNP1-201ENST00000522111 DIAPH1O60610 1272 aaKnown RBP36.16■■■■□ 3.38
TRNP1-201ENST00000522111 CDK12Q9NYV4 1490 aaPredicted RBP36.16■■■■□ 3.38
TRNP1-201ENST00000522111 NUDCQ9Y266 331 aa36.15■■■■□ 3.38
TRNP1-201ENST00000522111 DDX17Q92841 729 aaKnown RBP36.13■■■■□ 3.37
TRNP1-201ENST00000522111 KRT28Q7Z3Y7 464 aa36.11■■■■□ 3.37
TRNP1-201ENST00000522111 USP54Q70EL1 1684 aa36.1■■■■□ 3.37
TRNP1-201ENST00000522111 APAF1O14727 1248 aa36.1■■■■□ 3.37
TRNP1-201ENST00000522111 LMOD2Q6P5Q4 547 aa36.09■■■■□ 3.37
TRNP1-201ENST00000522111 TRPM3Q9HCF6 1732 aaPredicted RBP36.09■■■■□ 3.37
TRNP1-201ENST00000522111 PEAK1Q9H792 1746 aa36.09■■■■□ 3.37
TRNP1-201ENST00000522111 PLEKHG5O94827 1062 aa36.07■■■■□ 3.37
TRNP1-201ENST00000522111 MAP3K19Q56UN5 1328 aa36.06■■■■□ 3.36
TRNP1-201ENST00000522111 GTF3C3Q9Y5Q9 886 aa36.06■■■■□ 3.36
TRNP1-201ENST00000522111 RUNDC1Q96C34 613 aa36.03■■■■□ 3.36
TRNP1-201ENST00000522111 SLAIN2Q9P270 581 aa36.03■■■■□ 3.36
TRNP1-201ENST00000522111 BRINP3Q76B58 766 aa36.02■■■■□ 3.36
TRNP1-201ENST00000522111 IL13P35225 146 aa36■■■■□ 3.35
TRNP1-201ENST00000522111 HSP90AB2PQ58FF8 381 aa36■■■■□ 3.35
TRNP1-201ENST00000522111 NPHP3Q7Z494 1330 aa36■■■■□ 3.35
TRNP1-201ENST00000522111 AMPHP49418 695 aa35.98■■■■□ 3.35
TRNP1-201ENST00000522111 RRP7AQ9Y3A4 280 aaKnown RBP35.97■■■■□ 3.35
TRNP1-201ENST00000522111 SBNO1A3KN83 1393 aa35.97■■■■□ 3.35
TRNP1-201ENST00000522111 NEUROD2Q15784 382 aa35.96■■■■□ 3.35
TRNP1-201ENST00000522111 TCP11L2Q8N4U5 519 aa35.96■■■■□ 3.35
TRNP1-201ENST00000522111 IQSEC2Q5JU85 1478 aa35.96■■■■□ 3.35
TRNP1-201ENST00000522111 CDCA7LQ96GN5 454 aa35.96■■■■□ 3.35
TRNP1-201ENST00000522111 ALS2Q96Q42 1657 aa35.96■■■■□ 3.35
TRNP1-201ENST00000522111 FLT4P35916 1363 aa35.95■■■■□ 3.35
TRNP1-201ENST00000522111 HMOX1P09601 288 aa35.95■■■■□ 3.35
TRNP1-201ENST00000522111 EIF4A2Q14240 407 aaKnown RBP35.95■■■■□ 3.35
TRNP1-201ENST00000522111 LTN1O94822 1766 aa35.94■■■■□ 3.34
TRNP1-201ENST00000522111 NFAT5O94916 1531 aa35.94■■■■□ 3.34
TRNP1-201ENST00000522111 LTBP4Q8N2S1 1624 aa35.93■■■■□ 3.34
TRNP1-201ENST00000522111 PXDNQ92626 1479 aa35.93■■■■□ 3.34
TRNP1-201ENST00000522111 PLEKHF1Q96S99 279 aa35.93■■■■□ 3.34
TRNP1-201ENST00000522111 ZBTB7CA1YPR0 619 aa35.91■■■■□ 3.34
TRNP1-201ENST00000522111 PDE3BQ13370 1112 aa35.9■■■■□ 3.34
TRNP1-201ENST00000522111 MAPK8IP3Q9UPT6 1336 aa35.9■■■■□ 3.34
TRNP1-201ENST00000522111 ZNF521Q96K83 1311 aa35.89■■■■□ 3.34
TRNP1-201ENST00000522111 KCNH5Q8NCM2 988 aa35.89■■■■□ 3.34
TRNP1-201ENST00000522111 RSPH6AQ9H0K4 717 aa35.89■■■■□ 3.34
TRNP1-201ENST00000522111 PRKAR2BP31323 418 aa35.88■■■■□ 3.33
TRNP1-201ENST00000522111 FCHSD2O94868 740 aa35.87■■■■□ 3.33
TRNP1-201ENST00000522111 GCP02774 474 aa35.87■■■■□ 3.33
TRNP1-201ENST00000522111 SLIT3O75094 1523 aa35.87■■■■□ 3.33
TRNP1-201ENST00000522111 HOXC9P31274 260 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms