RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BRD4O60885 1362 aaPredicted RBP33.2■■■□□ 2.9
PVT1-212ENST00000521951 TTC21BQ7Z4L5 1316 aa33.19■■■□□ 2.9
PVT1-212ENST00000521951 TRPM3Q9HCF6 1732 aaPredicted RBP33.19■■■□□ 2.9
PVT1-212ENST00000521951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.18■■■□□ 2.9
PVT1-212ENST00000521951 PAK3O75914 559 aaPredicted RBP33.17■■■□□ 2.9
PVT1-212ENST00000521951 KNSTRNQ9Y448 316 aa33.17■■■□□ 2.9
PVT1-212ENST00000521951 PHLPP1O60346 1717 aa33.15■■■□□ 2.9
PVT1-212ENST00000521951 SBNO1A3KN83 1393 aa33.15■■■□□ 2.9
PVT1-212ENST00000521951 TTC21AQ8NDW8 1320 aa33.14■■■□□ 2.9
PVT1-212ENST00000521951 SPATA31A3Q5VYP0 1347 aa33.11■■■□□ 2.89
PVT1-212ENST00000521951 CGNL1Q0VF96 1302 aa33.1■■■□□ 2.89
PVT1-212ENST00000521951 COL16A1Q07092 1604 aaPredicted RBP33.09■■■□□ 2.89
PVT1-212ENST00000521951 NME9Q86XW9 330 aa33.09■■■□□ 2.89
PVT1-212ENST00000521951 ALS2Q96Q42 1657 aa33.09■■■□□ 2.89
PVT1-212ENST00000521951 TNS3Q68CZ2 1445 aa33.09■■■□□ 2.89
PVT1-212ENST00000521951 FYB1O15117 783 aa33.08■■■□□ 2.89
PVT1-212ENST00000521951 AMER1Q5JTC6 1135 aaPredicted RBP33.08■■■□□ 2.89
PVT1-212ENST00000521951 ABTB2Q8N961 1025 aa33.08■■■□□ 2.89
PVT1-212ENST00000521951 LRRC59Q96AG4 307 aaKnown RBP33.07■■■□□ 2.89
PVT1-212ENST00000521951 LMOD2Q6P5Q4 547 aa33.07■■■□□ 2.88
PVT1-212ENST00000521951 FBXO41Q8TF61 875 aa33.07■■■□□ 2.88
PVT1-212ENST00000521951 KIF20BQ96Q89 1820 aa33.07■■■□□ 2.88
PVT1-212ENST00000521951 PIK3C2AO00443 1686 aa33.06■■■□□ 2.88
PVT1-212ENST00000521951 ZRANB1Q9UGI0 708 aa33.05■■■□□ 2.88
PVT1-212ENST00000521951 NUTM2GQ5VZR2 741 aa33.04■■■□□ 2.88
PVT1-212ENST00000521951 GGNBP2Q9H3C7 697 aa33.04■■■□□ 2.88
PVT1-212ENST00000521951 HSPA1LP34931 641 aa33.03■■■□□ 2.88
PVT1-212ENST00000521951 NLRP6P59044 892 aa33.02■■■□□ 2.88
PVT1-212ENST00000521951 ARHGEF10O15013 1369 aa33.01■■■□□ 2.87
PVT1-212ENST00000521951 USP31Q70CQ4 1352 aa33.01■■■□□ 2.87
PVT1-212ENST00000521951 NPC1L1Q9UHC9 1359 aa33.01■■■□□ 2.87
PVT1-212ENST00000521951 CC2D1BQ5T0F9 858 aaKnown RBP33■■■□□ 2.87
PVT1-212ENST00000521951 NSD2O96028 1365 aa33■■■□□ 2.87
PVT1-212ENST00000521951 CNGB1Q14028 1251 aaPredicted RBP32.99■■■□□ 2.87
PVT1-212ENST00000521951 NLRP13Q86W25 1043 aa32.98■■■□□ 2.87
PVT1-212ENST00000521951 COG3Q96JB2 828 aa32.97■■■□□ 2.87
PVT1-212ENST00000521951 ANKRD26Q9UPS8 1709 aa32.96■■■□□ 2.87
PVT1-212ENST00000521951 MARF1Q9Y4F3 1742 aaKnown RBP32.96■■■□□ 2.87
PVT1-212ENST00000521951 USP54Q70EL1 1684 aa32.96■■■□□ 2.87
PVT1-212ENST00000521951 OVOS2A0A0J9YW53 1432 aa32.96■■■□□ 2.87
PVT1-212ENST00000521951 OVOS2Q6IE36 1432 aa32.96■■■□□ 2.87
PVT1-212ENST00000521951 PNPLA6Q8IY17 1366 aa32.94■■■□□ 2.86
PVT1-212ENST00000521951 PLEKHG5O94827 1062 aa32.92■■■□□ 2.86
PVT1-212ENST00000521951 USP19O94966 1318 aa32.91■■■□□ 2.86
PVT1-212ENST00000521951 DIEXFQ68CQ4 756 aaKnown RBP32.91■■■□□ 2.86
PVT1-212ENST00000521951 MORC1Q86VD1 984 aa32.91■■■□□ 2.86
PVT1-212ENST00000521951 MED1Q15648 1581 aaPredicted RBP32.9■■■□□ 2.86
PVT1-212ENST00000521951 CABLES1Q8TDN4 633 aa32.9■■■□□ 2.86
PVT1-212ENST00000521951 JCADQ9P266 1359 aa32.89■■■□□ 2.86
PVT1-212ENST00000521951 COL22A1Q8NFW1 1626 aaPredicted RBP32.89■■■□□ 2.86
PVT1-212ENST00000521951 CRYBG1Q9Y4K1 1723 aa32.88■■■□□ 2.85
PVT1-212ENST00000521951 SHPRHQ149N8 1683 aa32.88■■■□□ 2.85
PVT1-212ENST00000521951 SLIT3O75094 1523 aa32.86■■■□□ 2.85
PVT1-212ENST00000521951 PHRF1Q9P1Y6 1649 aaKnown RBP32.85■■■□□ 2.85
PVT1-212ENST00000521951 GCP02774 474 aa32.84■■■□□ 2.85
PVT1-212ENST00000521951 TNNT2P45379 298 aaPredicted RBP32.84■■■□□ 2.85
PVT1-212ENST00000521951 SOX12O15370 315 aa32.83■■■□□ 2.85
PVT1-212ENST00000521951 PARD3Q8TEW0 1356 aa32.83■■■□□ 2.85
PVT1-212ENST00000521951 ABCA3Q99758 1704 aa32.83■■■□□ 2.85
PVT1-212ENST00000521951 FBLN1P23142 703 aa32.82■■■□□ 2.85
PVT1-212ENST00000521951 KCNH5Q8NCM2 988 aa32.82■■■□□ 2.85
PVT1-212ENST00000521951 PRKRIP1Q9H875 184 aaPredicted RBP32.82■■■□□ 2.85
PVT1-212ENST00000521951 RALBP1Q15311 655 aa32.81■■■□□ 2.84
PVT1-212ENST00000521951 ANP32CO43423 234 aa32.8■■■□□ 2.84
PVT1-212ENST00000521951 NFAT5O94916 1531 aa32.79■■■□□ 2.84
PVT1-212ENST00000521951 HAP1P54257 671 aaPredicted RBP32.78■■■□□ 2.84
PVT1-212ENST00000521951 AATKQ6ZMQ8 1374 aa32.76■■■□□ 2.84
PVT1-212ENST00000521951 MAP2P11137 1827 aaKnown RBP32.76■■■□□ 2.84
PVT1-212ENST00000521951 SPATA31A6Q5VVP1 1343 aa32.74■■■□□ 2.83
PVT1-212ENST00000521951 NUTM2BA6NNL0 878 aaPredicted RBP32.74■■■□□ 2.83
PVT1-212ENST00000521951 NUTM2EB1AL46 878 aaPredicted RBP32.74■■■□□ 2.83
PVT1-212ENST00000521951 ZC3H6P61129 1189 aaKnown RBP32.74■■■□□ 2.83
PVT1-212ENST00000521951 NUTM2AQ8IVF1 878 aaPredicted RBP32.74■■■□□ 2.83
PVT1-212ENST00000521951 RRS1Q15050 365 aaKnown RBP32.73■■■□□ 2.83
PVT1-212ENST00000521951 PPP2R1AP30153 589 aa32.72■■■□□ 2.83
PVT1-212ENST00000521951 ARHGEF25Q86VW2 580 aa32.72■■■□□ 2.83
PVT1-212ENST00000521951 POLKQ9UBT6 870 aa32.72■■■□□ 2.83
PVT1-212ENST00000521951 LTN1O94822 1766 aa32.7■■■□□ 2.83
PVT1-212ENST00000521951 MAP3K19Q56UN5 1328 aa32.7■■■□□ 2.82
PVT1-212ENST00000521951 EMILIN1Q9Y6C2 1016 aa32.69■■■□□ 2.82
PVT1-212ENST00000521951 CPDO75976 1380 aa32.69■■■□□ 2.82
PVT1-212ENST00000521951 KIAA0232Q92628 1395 aa32.69■■■□□ 2.82
PVT1-212ENST00000521951 MYBBP1AQ9BQG0 1328 aaKnown RBP32.68■■■□□ 2.82
PVT1-212ENST00000521951 ZBTB7CA1YPR0 619 aa32.67■■■□□ 2.82
PVT1-212ENST00000521951 ADAMTS2O95450 1211 aa32.66■■■□□ 2.82
PVT1-212ENST00000521951 MTHFSP49914 203 aa32.66■■■□□ 2.82
PVT1-212ENST00000521951 PRDM11Q9NQV5 511 aa32.65■■■□□ 2.82
PVT1-212ENST00000521951 LRP6O75581 1613 aa32.64■■■□□ 2.82
PVT1-212ENST00000521951 PPM1GO15355 546 aaPredicted RBP32.63■■■□□ 2.81
PVT1-212ENST00000521951 AMPHP49418 695 aa32.63■■■□□ 2.81
PVT1-212ENST00000521951 CHRNA2Q15822 529 aa32.63■■■□□ 2.81
PVT1-212ENST00000521951 ILDR1Q86SU0 546 aaPredicted RBP32.63■■■□□ 2.81
PVT1-212ENST00000521951 SMG6Q86US8 1419 aaKnown RBP32.63■■■□□ 2.81
PVT1-212ENST00000521951 PEAK1Q9H792 1746 aa32.63■■■□□ 2.81
PVT1-212ENST00000521951 FAM83GA6ND36 823 aa32.61■■■□□ 2.81
PVT1-212ENST00000521951 COL18A1P39060 1754 aa32.6■■■□□ 2.81
PVT1-212ENST00000521951 IP6K1Q92551 441 aa32.6■■■□□ 2.81
PVT1-212ENST00000521951 KIF24Q5T7B8 1368 aa32.59■■■□□ 2.81
PVT1-212ENST00000521951 HOXC9P31274 260 aa32.59■■■□□ 2.81
PVT1-212ENST00000521951 MIER1Q8N108 512 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms